Searching journal content for Ian Korf in author.

Displaying results 1-7 of 7
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  1. Research: GC skew at the 5′ and 3′ ends of human genes links R-loop formation to epigenetic regulation and transcription termination
    • Paul A. Ginno,
    • Yoong Wearn Lim,
    • Paul L. Lott,
    • Ian Korf,
    • and Frédéric Chédin
    Genome Res. October 2013 23: 1590-1600; Published in Advance July 18, 2013, doi:10.1101/gr.158436.113
  2. Resource: Assemblathon 1: A competitive assessment of de novo short read assembly methods
    • Dent Earl,
    • Keith Bradnam,
    • John St. John,
    • Aaron Darling,
    • Dawei Lin,
    • Joseph Fass,
    • Hung On Ken Yu,
    • Vince Buffalo,
    • Daniel R. Zerbino,
    • Mark Diekhans,
    • Ngan Nguyen,
    • Pramila Nuwantha Ariyaratne,
    • Wing-Kin Sung,
    • Zemin Ning,
    • Matthias Haimel,
    • Jared T. Simpson,
    • Nuno A. Fonseca,
    • İnanç Birol,
    • T. Roderick Docking,
    • Isaac Y. Ho,
    • Daniel S. Rokhsar,
    • Rayan Chikhi,
    • Dominique Lavenier,
    • Guillaume Chapuis,
    • Delphine Naquin,
    • Nicolas Maillet,
    • Michael C. Schatz,
    • David R. Kelley,
    • Adam M. Phillippy,
    • Sergey Koren,
    • Shiaw-Pyng Yang,
    • Wei Wu,
    • Wen-Chi Chou,
    • Anuj Srivastava,
    • Timothy I. Shaw,
    • J. Graham Ruby,
    • Peter Skewes-Cox,
    • Miguel Betegon,
    • Michelle T. Dimon,
    • Victor Solovyev,
    • Igor Seledtsov,
    • Petr Kosarev,
    • Denis Vorobyev,
    • Ricardo Ramirez-Gonzalez,
    • Richard Leggett,
    • Dan MacLean,
    • Fangfang Xia,
    • Ruibang Luo,
    • Zhenyu Li,
    • Yinlong Xie,
    • Binghang Liu,
    • Sante Gnerre,
    • Iain MacCallum,
    • Dariusz Przybylski,
    • Filipe J. Ribeiro,
    • Shuangye Yin,
    • Ted Sharpe,
    • Giles Hall,
    • Paul J. Kersey,
    • Richard Durbin,
    • Shaun D. Jackman,
    • Jarrod A. Chapman,
    • Xiaoqiu Huang,
    • Joseph L. DeRisi,
    • Mario Caccamo,
    • Yingrui Li,
    • David B. Jaffe,
    • Richard E. Green,
    • David Haussler,
    • Ian Korf,
    • and Benedict Paten
    Genome Res. December 2011 21: 2224-2241; Published in Advance September 16, 2011, doi:10.1101/gr.126599.111
    OPEN ACCESS ARTICLE
  3. Research: Large-scale methylation domains mark a functional subset of neuronally expressed genes
    • Diane I. Schroeder,
    • Paul Lott,
    • Ian Korf,
    • and Janine M. LaSalle
    Genome Res. October 2011 21: 1583-1591; Published in Advance July 22, 2011, doi:10.1101/gr.119131.110
  4. RESOURCE: MAKER: An easy-to-use annotation pipeline designed for emerging model organism genomes
    • Brandi L. Cantarel,
    • Ian Korf,
    • Sofia M.C. Robb,
    • Genis Parra,
    • Eric Ross,
    • Barry Moore,
    • Carson Holt,
    • Alejandro Sánchez Alvarado,
    • and Mark Yandell
    Genome Res. January 2008 18: 188-196; Published in Advance November 19, 2007, doi:10.1101/gr.6743907
  5. LETTER: Leveraging the Mouse Genome for Gene Prediction in Human: From Whole-Genome Shotgun Reads to a Global Synteny Map
    • Paul Flicek,
    • Evan Keibler,
    • Ping Hu,
    • Ian Korf,
    • and Michael R. Brent
    Genome Res. January 1, 2003 13: 46-54; doi:10.1101/gr.830003
  6. RESOURCE: The Bioperl Toolkit: Perl Modules for the Life Sciences
    • Jason E. Stajich,
    • David Block,
    • Kris Boulez,
    • Steven E. Brenner,
    • Stephen A. Chervitz,
    • Chris Dagdigian,
    • Georg Fuellen,
    • James G.R. Gilbert,
    • Ian Korf,
    • Hilmar Lapp,
    • Heikki Lehväslaiho,
    • Chad Matsalla,
    • Chris J. Mungall,
    • Brian I. Osborne,
    • Matthew R. Pocock,
    • Peter Schattner,
    • Martin Senger,
    • Lincoln D. Stein,
    • Elia Stupka,
    • Mark D. Wilkinson,
    • and Ewan Birney
    Genome Res. October 1, 2002 12: 1611-1618; doi:10.1101/gr.361602
  7. LETTER: The Syntenic Relationship of the Zebrafish and Human Genomes
    • W. Bradley Barbazuk,
    • Ian Korf,
    • Candy Kadavi,
    • Joshua Heyen,
    • Stephanie Tate,
    • Edmund Wun,
    • Joseph A. Bedell,
    • John D. McPherson,
    • and Stephen L. Johnson
    Genome Res. September 1, 2000 10: 1351-1358; doi:10.1101/gr.144700
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