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Ian Fiddes
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Displaying results 1-5 of
5
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Method
:
Resolving the full spectrum of human genome variation using Linked-Reads
Patrick Marks
,
Sarah Garcia
,
Alvaro Martinez Barrio
,
Kamila Belhocine
,
Jorge Bernate
,
Rajiv Bharadwaj
,
Keith Bjornson
,
Claudia Catalanotti
,
Josh Delaney
,
Adrian Fehr
,
Ian T. Fiddes
,
Brendan Galvin
,
Haynes Heaton
,
Jill Herschleb
,
Christopher Hindson
,
Esty Holt
,
Cassandra B. Jabara
,
Susanna Jett
,
Nikka Keivanfar
,
Sofia Kyriazopoulou-Panagiotopoulou
,
Monkol Lek
,
Bill Lin
,
Adam Lowe
,
Shazia Mahamdallie
,
Shamoni Maheshwari
,
Tony Makarewicz
,
Jamie Marshall
,
Francesca Meschi
,
Christopher J. O'Keefe
,
Heather Ordonez
,
Pranav Patel
,
Andrew Price
,
Ariel Royall
,
Elise Ruark
,
Sheila Seal
,
Michael Schnall-Levin
,
Preyas Shah
,
David Stafford
,
Stephen Williams
,
Indira Wu
,
Andrew Wei Xu
,
Nazneen Rahman
,
Daniel MacArthur
,
and
Deanna M. Church
Genome Res.
April 2019
29
:
635
-
645
;
Published in Advance
March 20, 2019
,
doi:
10.1101/gr.234443.118
Abstract
Full Text
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Method
:
Comparative Annotation Toolkit (CAT)—simultaneous clade and personal genome annotation
Ian T. Fiddes
,
Joel Armstrong
,
Mark Diekhans
,
Stefanie Nachtweide
,
Zev N. Kronenberg
,
Jason G. Underwood
,
David Gordon
,
Dent Earl
,
Thomas Keane
,
Evan E. Eichler
,
David Haussler
,
Mario Stanke
,
and
Benedict Paten
Genome Res.
July 2018
28
:
1029
-
1038
;
Published in Advance
June 8, 2018
,
doi:
10.1101/gr.233460.117
Abstract
Full Text
Full Text (PDF)
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Research
:
Evaluating recovery potential of the northern white rhinoceros from cryopreserved somatic cells
Tate Tunstall
,
Richard Kock
,
Jiri Vahala
,
Mark Diekhans
,
Ian Fiddes
,
Joel Armstrong
,
Benedict Paten
,
Oliver A. Ryder
,
and
Cynthia C. Steiner
Genome Res.
June 2018
28
:
780
-
788
;
Published in Advance
May 24, 2018
,
doi:
10.1101/gr.227603.117
Abstract
Full Text
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Research
:
Repeat associated mechanisms of genome evolution and function revealed by the
Mus caroli
and
Mus pahari
genomes
David Thybert
,
Maša Roller
,
Fábio C.P. Navarro
,
Ian Fiddes
,
Ian Streeter
,
Christine Feig
,
David Martin-Galvez
,
Mikhail Kolmogorov
,
Václav Janoušek
,
Wasiu Akanni
,
Bronwen Aken
,
Sarah Aldridge
,
Varshith Chakrapani
,
William Chow
,
Laura Clarke
,
Carla Cummins
,
Anthony Doran
,
Matthew Dunn
,
Leo Goodstadt
,
Kerstin Howe
,
Matthew Howell
,
Ambre-Aurore Josselin
,
Robert C. Karn
,
Christina M. Laukaitis
,
Lilue Jingtao
,
Fergal Martin
,
Matthieu Muffato
,
Stefanie Nachtweide
,
Michael A. Quail
,
Cristina Sisu
,
Mario Stanke
,
Klara Stefflova
,
Cock Van Oosterhout
,
Frederic Veyrunes
,
Ben Ward
,
Fengtang Yang
,
Golbahar Yazdanifar
,
Amonida Zadissa
,
David J. Adams
,
Alvis Brazma
,
Mark Gerstein
,
Benedict Paten
,
Son Pham
,
Thomas M. Keane
,
Duncan T. Odom
,
and
Paul Flicek
Genome Res.
April 2018
28
:
448
-
459
;
Published in Advance
March 21, 2018
,
doi:
10.1101/gr.234096.117
Abstract
Full Text
Full Text (PDF)
Supplemental Material
OPEN ACCESS ARTICLE
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Research
:
Improved genome assembly of American alligator genome reveals conserved architecture of estrogen signaling
Edward S. Rice
,
Satomi Kohno
,
John St. John
,
Son Pham
,
Jonathan Howard
,
Liana F. Lareau
,
Brendan L. O'Connell
,
Glenn Hickey
,
Joel Armstrong
,
Alden Deran
,
Ian Fiddes
,
Roy N. Platt II
,
Cathy Gresham
,
Fiona McCarthy
,
Colin Kern
,
David Haan
,
Tan Phan
,
Carl Schmidt
,
Jeremy R. Sanford
,
David A. Ray
,
Benedict Paten
,
Louis J. Guillette, Jr.
,
and
Richard E. Green
Genome Res.
May 2017
27
:
686
-
696
;
Published in Advance
January 30, 2017
,
doi:
10.1101/gr.213595.116
Abstract
Full Text
Full Text (PDF)
Supplemental Material
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