Searching journal content for Hidemasa Bono in author.

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  1. Corrigendum: Corrigendum: Functional annotation of human long noncoding RNAs via molecular phenotyping
    • Jordan A. Ramilowski,
    • Chi Wai Yip,
    • Saumya Agrawal,
    • Jen-Chien Chang,
    • Yari Ciani,
    • Ivan V. Kulakovskiy,
    • Mickaël Mendez,
    • Jasmine Li Ching Ooi,
    • John F. Ouyang,
    • Nick Parkinson,
    • Andreas Petri,
    • Leonie Roos,
    • Jessica Severin,
    • Kayoko Yasuzawa,
    • Imad Abugessaisa,
    • Altuna Akalin,
    • Ivan V. Antonov,
    • Erik Arner,
    • Alessandro Bonetti,
    • Hidemasa Bono,
    • Beatrice Borsari,
    • Frank Brombacher,
    • Christopher J.F. Cameron,
    • Carlo Vittorio Cannistraci,
    • Ryan Cardenas,
    • Melissa Cardon,
    • Howard Chang,
    • Josée Dostie,
    • Luca Ducoli,
    • Alexander Favorov,
    • Alexandre Fort,
    • Diego Garrido,
    • Noa Gil,
    • Juliette Gimenez,
    • Reto Guler,
    • Lusy Handoko,
    • Jayson Harshbarger,
    • Akira Hasegawa,
    • Yuki Hasegawa,
    • Kosuke Hashimoto,
    • Norihito Hayatsu,
    • Peter Heutink,
    • Tetsuro Hirose,
    • Eddie L. Imada,
    • Masayoshi Itoh,
    • Bogumil Kaczkowski,
    • Aditi Kanhere,
    • Emily Kawabata,
    • Hideya Kawaji,
    • Tsugumi Kawashima,
    • S. Thomas Kelly,
    • Miki Kojima,
    • Naoto Kondo,
    • Haruhiko Koseki,
    • Tsukasa Kouno,
    • Anton Kratz,
    • Mariola Kurowska-Stolarska,
    • Andrew Tae Jun Kwon,
    • Jeffrey Leek,
    • Andreas Lennartsson,
    • Marina Lizio,
    • Fernando López-Redondo,
    • Joachim Luginbühl,
    • Shiori Maeda,
    • Vsevolod J. Makeev,
    • Luigi Marchionni,
    • Yulia A. Medvedeva,
    • Aki Minoda,
    • Ferenc Müller,
    • Manuel Muñoz-Aguirre,
    • Mitsuyoshi Murata,
    • Hiromi Nishiyori,
    • Kazuhiro R. Nitta,
    • Shuhei Noguchi,
    • Yukihiko Noro,
    • Ramil Nurtdinov,
    • Yasushi Okazaki,
    • Valerio Orlando,
    • Denis Paquette,
    • Callum J.C. Parr,
    • Owen J.L. Rackham,
    • Patrizia Rizzu,
    • Diego Fernando Sánchez Martinez,
    • Albin Sandelin,
    • Pillay Sanjana,
    • Colin A.M. Semple,
    • Youtaro Shibayama,
    • Divya M. Sivaraman,
    • Takahiro Suzuki,
    • Suzannah C. Szumowski,
    • Michihira Tagami,
    • Martin S. Taylor,
    • Chikashi Terao,
    • Malte Thodberg,
    • Supat Thongjuea,
    • Vidisha Tripathi,
    • Igor Ulitsky,
    • Roberto Verardo,
    • Ilya E. Vorontsov,
    • Chinatsu Yamamoto,
    • Robert S. Young,
    • J. Kenneth Baillie,
    • Alistair R.R. Forrest,
    • Roderic Guigó,
    • Michael M. Hoffman,
    • Chung Chau Hon,
    • Takeya Kasukawa,
    • Sakari Kauppinen,
    • Juha Kere,
    • Boris Lenhard,
    • Claudio Schneider,
    • Harukazu Suzuki,
    • Ken Yagi,
    • Michiel J.L. de Hoon,
    • Jay W. Shin,
    • and Piero Carninci
    Genome Res. September 2020 30: 1377-1; doi:10.1101/gr.270330.120
    OPEN ACCESS ARTICLE
  2. Resource: Functional annotation of human long noncoding RNAs via molecular phenotyping
    • Jordan A. Ramilowski,
    • Chi Wai Yip,
    • Saumya Agrawal,
    • Jen-Chien Chang,
    • Yari Ciani,
    • Ivan V. Kulakovskiy,
    • Mickaël Mendez,
    • Jasmine Li Ching Ooi,
    • John F. Ouyang,
    • Nick Parkinson,
    • Andreas Petri,
    • Leonie Roos,
    • Jessica Severin,
    • Kayoko Yasuzawa,
    • Imad Abugessaisa,
    • Altuna Akalin,
    • Ivan V. Antonov,
    • Erik Arner,
    • Alessandro Bonetti,
    • Hidemasa Bono,
    • Beatrice Borsari,
    • Frank Brombacher,
    • Christopher J.F. Cameron,
    • Carlo Vittorio Cannistraci,
    • Ryan Cardenas,
    • Melissa Cardon,
    • Howard Chang,
    • Josée Dostie,
    • Luca Ducoli,
    • Alexander Favorov,
    • Alexandre Fort,
    • Diego Garrido,
    • Noa Gil,
    • Juliette Gimenez,
    • Reto Guler,
    • Lusy Handoko,
    • Jayson Harshbarger,
    • Akira Hasegawa,
    • Yuki Hasegawa,
    • Kosuke Hashimoto,
    • Norihito Hayatsu,
    • Peter Heutink,
    • Tetsuro Hirose,
    • Eddie L. Imada,
    • Masayoshi Itoh,
    • Bogumil Kaczkowski,
    • Aditi Kanhere,
    • Emily Kawabata,
    • Hideya Kawaji,
    • Tsugumi Kawashima,
    • S. Thomas Kelly,
    • Miki Kojima,
    • Naoto Kondo,
    • Haruhiko Koseki,
    • Tsukasa Kouno,
    • Anton Kratz,
    • Mariola Kurowska-Stolarska,
    • Andrew Tae Jun Kwon,
    • Jeffrey Leek,
    • Andreas Lennartsson,
    • Marina Lizio,
    • Fernando López-Redondo,
    • Joachim Luginbühl,
    • Shiori Maeda,
    • Vsevolod J. Makeev,
    • Luigi Marchionni,
    • Yulia A. Medvedeva,
    • Aki Minoda,
    • Ferenc Müller,
    • Manuel Muñoz-Aguirre,
    • Mitsuyoshi Murata,
    • Hiromi Nishiyori,
    • Kazuhiro R. Nitta,
    • Shuhei Noguchi,
    • Yukihiko Noro,
    • Ramil Nurtdinov,
    • Yasushi Okazaki,
    • Valerio Orlando,
    • Denis Paquette,
    • Callum J.C. Parr,
    • Owen J.L. Rackham,
    • Patrizia Rizzu,
    • Diego Fernando Sánchez Martinez,
    • Albin Sandelin,
    • Pillay Sanjana,
    • Colin A.M. Semple,
    • Youtaro Shibayama,
    • Divya M. Sivaraman,
    • Takahiro Suzuki,
    • Suzannah C. Szumowski,
    • Michihira Tagami,
    • Martin S. Taylor,
    • Chikashi Terao,
    • Malte Thodberg,
    • Supat Thongjuea,
    • Vidisha Tripathi,
    • Igor Ulitsky,
    • Roberto Verardo,
    • Ilya E. Vorontsov,
    • Chinatsu Yamamoto,
    • Robert S. Young,
    • J. Kenneth Baillie,
    • Alistair R.R. Forrest,
    • Roderic Guigó,
    • Michael M. Hoffman,
    • Chung Chau Hon,
    • Takeya Kasukawa,
    • Sakari Kauppinen,
    • Juha Kere,
    • Boris Lenhard,
    • Claudio Schneider,
    • Harukazu Suzuki,
    • Ken Yagi,
    • Michiel J.L. de Hoon,
    • Jay W. Shin,
    • and Piero Carninci
    Genome Res. July 2020 30: 1060-1072; Published in Advance July 27, 2020, doi:10.1101/gr.254219.119
    OPEN ACCESS ARTICLE
  3. LETTER: Systematic Expression Profiling of the Mouse Transcriptome Using RIKEN cDNA Microarrays
    • Hidemasa Bono,
    • Ken Yagi,
    • Takeya Kasukawa,
    • Itoshi Nikaido,
    • Naoko Tominaga,
    • Rika Miki,
    • Yosuke Mizuno,
    • Yasuhiro Tomaru,
    • Hitoshi Goto,
    • Hiroyuki Nitanda,
    • Daisuke Shimizu,
    • Hirochika Makino,
    • Tomoyuki Morita,
    • Junshin Fujiyama,
    • Takehito Sakai,
    • Takashi Shimoji,
    • David A. Hume,
    • RIKEN GER Group,
    • GSL Members,
    • Yoshihide Hayashizaki,
    • and Yasushi Okazaki
    Genome Res. June 2003 13: 1318-1323; doi:10.1101/gr.1075103
  4. LETTER: Comprehensive Analysis of the Mouse Metabolome Based on the Transcriptome
    • Hidemasa Bono,
    • Itoshi Nikaido,
    • Takeya Kasukawa,
    • RIKEN GER Group,
    • GSL Members,
    • Yoshihide Hayashizaki,
    • and Yasushi Okazaki
    Genome Res. June 2003 13: 1345-1349; doi:10.1101/gr.974603
  5. LETTER: The Mouse Secretome: Functional Classification of the Proteins Secreted Into the Extracellular Environment
    • Sean M. Grimmond,
    • Kevin C. Miranda,
    • Zheng Yuan,
    • Melissa J. Davis,
    • David A. Hume,
    • Ken Yagi,
    • Naoko Tominaga,
    • Hidemasa Bono,
    • Yoshihide Hayashizaki,
    • Yasushi Okazaki,
    • RIKEN GER Group,
    • GSL Members,
    • and Rohan D. Teasdale
    Genome Res. June 2003 13: 1350-1359; doi:10.1101/gr.983703
  6. LETTER: Continued Discovery of Transcriptional Units Expressed in Cells of the Mouse Mononuclear Phagocyte Lineage
    • Christine A. Wells,
    • Timothy Ravasi,
    • Razvan Sultana,
    • Ken Yagi,
    • Piero Carninci,
    • Hidemasa Bono,
    • Geoffrey Faulkner,
    • Yasushi Okazaki,
    • John Quackenbush,
    • David A. Hume,
    • RIKEN GER Group,
    • GSL Members,
    • and Paul A. Lyons
    Genome Res. June 2003 13: 1360-1365; doi:10.1101/gr.1056103
  7. RESOURCE: Development and Evaluation of an Automated Annotation Pipeline and cDNA Annotation System
    • Takeya Kasukawa,
    • Masaaki Furuno,
    • Itoshi Nikaido,
    • Hidemasa Bono,
    • David A. Hume,
    • Carol Bult,
    • David P. Hill,
    • Richard Baldarelli,
    • Julian Gough,
    • Alexander Kanapin,
    • Hideo Matsuda,
    • Lynn M. Schriml,
    • Yoshihide Hayashizaki,
    • Yasushi Okazaki,
    • and John Quackenbush
    Genome Res. June 2003 13: 1542-1551; doi:10.1101/gr.992803
  8. ARTICLE: Targeting a Complex Transcriptome: The Construction of the Mouse Full-Length cDNA Encyclopedia
    • Piero Carninci,
    • Kazunori Waki,
    • Toshiyuki Shiraki,
    • Hideaki Konno,
    • Kazuhiro Shibata,
    • Masayoshi Itoh,
    • Katsunori Aizawa,
    • Takahiro Arakawa,
    • Yoshiyuki Ishii,
    • Daisuke Sasaki,
    • Hidemasa Bono,
    • Shinji Kondo,
    • Yuichi Sugahara,
    • Rintaro Saito,
    • Naoki Osato,
    • Shiro Fukuda,
    • Kenjiro Sato,
    • Akira Watahiki,
    • Tomoko Hirozane-Kishikawa,
    • Mari Nakamura,
    • Yuko Shibata,
    • Ayako Yasunishi,
    • Noriko Kikuchi,
    • Atsushi Yoshiki,
    • Moriaki Kusakabe,
    • Stefano Gustincich,
    • Kirk Beisel,
    • William Pavan,
    • Vassilis Aidinis,
    • Akira Nakagawara,
    • William A. Held,
    • Hiroo Iwata,
    • Tomohiro Kono,
    • Hiromitsu Nakauchi,
    • Paul Lyons,
    • Christine Wells,
    • David A. Hume,
    • Michela Fagiolini,
    • Takao K. Hensch,
    • Michelle Brinkmeier,
    • Sally Camper,
    • Junji Hirota,
    • Peter Mombaerts,
    • Masami Muramatsu,
    • Yasushi Okazaki,
    • Jun Kawai,
    • and Yoshihide Hayashizaki
    Genome Res. June 2003 13: 1273-1289; doi:10.1101/gr.1119703
  9. LETTER: Analysis of the Mouse Transcriptome for Genes Involved in the Function of the Nervous System
    • Stefano Gustincich,
    • Serge Batalov,
    • Kirk W. Beisel,
    • Hidemasa Bono,
    • Piero Carninci,
    • Colin F. Fletcher,
    • Sean Grimmond,
    • Nobutaka Hirokawa,
    • Erich D. Jarvis,
    • Tim Jegla,
    • Yuka Kawasawa,
    • Julianna LeMieux,
    • Harukata Miki,
    • Elio Raviola,
    • Rohan D. Teasdale,
    • Naoko Tominaga,
    • Ken Yagi,
    • Andreas Zimmer,
    • RIKEN GER Group,
    • GSL Members,
    • Yoshihide Hayashizaki,
    • and Yasushi Okazaki
    Genome Res. June 2003 13: 1395-1401; doi:10.1101/gr.1135303
  10. LETTER: Discovery of Imprinted Transcripts in the Mouse Transcriptome Using Large-Scale Expression Profiling
    • Itoshi Nikaido,
    • Chika Saito,
    • Yosuke Mizuno,
    • Makiko Meguro,
    • Hidemasa Bono,
    • Moritoshi Kadomura,
    • Tomohiro Kono,
    • Gerard A. Morris,
    • Paul A. Lyons,
    • Mitsuo Oshimura,
    • RIKEN GER Group,
    • GSL Members,
    • Yoshihide Hayashizaki,
    • and Yasushi Okazaki
    Genome Res. June 2003 13: 1402-1409; doi:10.1101/gr.1055303
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