Searching journal content for Gregory E. Crawford in author.

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  1. Method: Profiling the quantitative occupancy of myriad transcription factors across conditions by modeling chromatin accessibility data
    • Kaixuan Luo,
    • Jianling Zhong,
    • Alexias Safi,
    • Linda K. Hong,
    • Alok K. Tewari,
    • Lingyun Song,
    • Timothy E. Reddy,
    • Li Ma,
    • Gregory E. Crawford,
    • and Alexander J. Hartemink
    Genome Res. June 2022 32: 1183-1198; Published in Advance May 24, 2022, doi:10.1101/gr.272203.120
  2. Method: Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants
    • Dongwon Lee,
    • Ashish Kapoor,
    • Alexias Safi,
    • Lingyun Song,
    • Marc K. Halushka,
    • Gregory E. Crawford,
    • and Aravinda Chakravarti
    Genome Res. October 2018 28: 1577-1588; Published in Advance August 23, 2018, doi:10.1101/gr.234633.118
    OPEN ACCESS ARTICLE
  3. Research: Glucocorticoid receptor recruits to enhancers and drives activation by motif-directed binding
    • Ian C. McDowell,
    • Alejandro Barrera,
    • Anthony M. D'Ippolito,
    • Christopher M. Vockley,
    • Linda K. Hong,
    • Sarah M. Leichter,
    • Luke C. Bartelt,
    • William H. Majoros,
    • Lingyun Song,
    • Alexias Safi,
    • D. Dewran Koçak,
    • Charles A. Gersbach,
    • Alexander J. Hartemink,
    • Gregory E. Crawford,
    • Barbara E. Engelhardt,
    • and Timothy E. Reddy
    Genome Res. September 2018 28: 1272-1284; Published in Advance August 10, 2018, doi:10.1101/gr.233346.117
    OPEN ACCESS ARTICLE
  4. Corrigendum: Corrigendum: Characterization of the neural stem cell gene regulatory network identifies OLIG2 as a multifunctional regulator of self-renewal
    • Juan L. Mateo,
    • Debbie L.C. van den Berg,
    • Maximilian Haeussler,
    • Daniela Drechsel,
    • Zachary B. Gaber,
    • Diogo S. Castro,
    • Paul Robson,
    • Q. Richard Lu,
    • Gregory E. Crawford,
    • Paul Flicek,
    • Laurence Ettwiller,
    • Joachim Wittbrodt,
    • François Guillemot,
    • and Ben Martynoga
    Genome Res. December 2017 27: 2129; doi:10.1101/gr.231845.117
    OPEN ACCESS ARTICLE
  5. Research: Microbiota regulate intestinal epithelial gene expression by suppressing the transcription factor Hepatocyte nuclear factor 4 alpha
    • James M. Davison,
    • Colin R. Lickwar,
    • Lingyun Song,
    • Ghislain Breton,
    • Gregory E. Crawford,
    • and John F. Rawls
    Genome Res. July 2017 27: 1195-1206; Published in Advance April 6, 2017, doi:10.1101/gr.220111.116
    OPEN ACCESS ARTICLE
  6. Corrigendum: Corrigendum: Characterization of the neural stem cell gene regulatory network identifies OLIG2 as a multifunctional regulator of self-renewal
    • Juan L. Mateo,
    • Debbie L.C. van den Berg,
    • Maximilian Haeussler,
    • Daniela Drechsel,
    • Zachary B. Gaber,
    • Diogo S. Castro,
    • Paul Robson,
    • Q. Richard Lu,
    • Gregory E. Crawford,
    • Paul Flicek,
    • Laurence Ettwiller,
    • Joachim Wittbrodt,
    • François Guillemot,
    • and Ben Martynoga
    Genome Res. November 2016 26: 1626; doi:10.1101/gr.216044.116
    OPEN ACCESS ARTICLE
  7. Method: Mapping nucleosome positions using DNase-seq
    • Jianling Zhong,
    • Kaixuan Luo,
    • Peter S. Winter,
    • Gregory E. Crawford,
    • Edwin S. Iversen,
    • and Alexander J. Hartemink
    Genome Res. March 2016 26: 351-364; Published in Advance January 15, 2016, doi:10.1101/gr.195602.115
  8. Research: Genome-wide specificity of DNA binding, gene regulation, and chromatin remodeling by TALE- and CRISPR/Cas9-based transcriptional activators
    • Lauren R. Polstein,
    • Pablo Perez-Pinera,
    • D. Dewran Kocak,
    • Christopher M. Vockley,
    • Peggy Bledsoe,
    • Lingyun Song,
    • Alexias Safi,
    • Gregory E. Crawford,
    • Timothy E. Reddy,
    • and Charles A. Gersbach
    Genome Res. August 2015 25: 1158-1169; Published in Advance May 29, 2015, doi:10.1101/gr.179044.114
  9. Research: Genome accessibility is widely preserved and locally modulated during mitosis
    • Chris C.-S. Hsiung,
    • Christapher S. Morrissey,
    • Maheshi Udugama,
    • Christopher L. Frank,
    • Cheryl A. Keller,
    • Songjoon Baek,
    • Belinda Giardine,
    • Gregory E. Crawford,
    • Myong-Hee Sung,
    • Ross C. Hardison,
    • and Gerd A. Blobel
    Genome Res. February 2015 25: 213-225; Published in Advance November 4, 2014, doi:10.1101/gr.180646.114
  10. Research: Characterization of the neural stem cell gene regulatory network identifies OLIG2 as a multifunctional regulator of self-renewal
    • Juan L. Mateo,
    • Debbie L.C. van den Berg,
    • Maximilian Haeussler,
    • Daniela Drechsel,
    • Zachary B. Gaber,
    • Diogo S. Castro,
    • Paul Robson,
    • Q. Richard Lu,
    • Gregory E. Crawford,
    • Paul Flicek,
    • Laurence Ettwiller,
    • Joachim Wittbrodt,
    • François Guillemot,
    • and Ben Martynoga
    Genome Res. January 2015 25: 41-56; Published in Advance October 7, 2014, doi:10.1101/gr.173435.114
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