Searching journal content for Gad Getz in author.

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  1. Method: Quantification of somatic mutation flow across individual cell division events by lineage sequencing
    • Yehuda Brody,
    • Robert J. Kimmerling,
    • Yosef E. Maruvka,
    • David Benjamin,
    • Juniper J. Elacqua,
    • Nicholas J. Haradhvala,
    • Jaegil Kim,
    • Kent W. Mouw,
    • Kristjana Frangaj,
    • Amnon Koren,
    • Gad Getz,
    • Scott R. Manalis,
    • and Paul C. Blainey
    Genome Res. December 2018 28: 1901-1918; Published in Advance November 20, 2018, doi:10.1101/gr.238543.118
    OPEN ACCESS ARTICLE
  2. Method: SvABA: genome-wide detection of structural variants and indels by local assembly
    • Jeremiah A. Wala,
    • Pratiti Bandopadhayay,
    • Noah F. Greenwald,
    • Ryan O'Rourke,
    • Ted Sharpe,
    • Chip Stewart,
    • Steve Schumacher,
    • Yilong Li,
    • Joachim Weischenfeldt,
    • Xiaotong Yao,
    • Chad Nusbaum,
    • Peter Campbell,
    • Gad Getz,
    • Matthew Meyerson,
    • Cheng-Zhong Zhang,
    • Marcin Imielinski,
    • and Rameen Beroukhim
    Genome Res. April 2018 28: 581-591; Published in Advance March 13, 2018, doi:10.1101/gr.221028.117
  3. Method: Co-expression networks reveal the tissue-specific regulation of transcription and splicing
    • Ashis Saha,
    • Yungil Kim,
    • Ariel D.H. Gewirtz,
    • Brian Jo,
    • Chuan Gao,
    • Ian C. McDowell,
    • The GTEx Consortium,
    • Barbara E. Engelhardt,
    • and Alexis Battle
    Genome Res. November 2017 27: 1843-1858; Published in Advance October 11, 2017, doi:10.1101/gr.216721.116
    OPEN ACCESS ARTICLE
  4. Method: Identifying cis-mediators for trans-eQTLs across many human tissues using genomic mediation analysis
    • Fan Yang,
    • Jiebiao Wang,
    • The GTEx Consortium,
    • Brandon L. Pierce,
    • and Lin S. Chen
    Genome Res. November 2017 27: 1859-1871; Published in Advance October 11, 2017, doi:10.1101/gr.216754.116
  5. Research: Exome sequencing of lymphomas from three dog breeds reveals somatic mutation patterns reflecting genetic background
    • Ingegerd Elvers,
    • Jason Turner-Maier,
    • Ross Swofford,
    • Michele Koltookian,
    • Jeremy Johnson,
    • Chip Stewart,
    • Cheng-Zhong Zhang,
    • Steven E. Schumacher,
    • Rameen Beroukhim,
    • Mara Rosenberg,
    • Rachael Thomas,
    • Evan Mauceli,
    • Gad Getz,
    • Federica Di Palma,
    • Jaime F. Modiano,
    • Matthew Breen,
    • Kerstin Lindblad-Toh,
    • and Jessica Alföldi
    Genome Res. November 2015 25: 1634-1645; Published in Advance September 16, 2015, doi:10.1101/gr.194449.115
    OPEN ACCESS ARTICLE
  6. Research: Whole-genome and multisector exome sequencing of primary and post-treatment glioblastoma reveals patterns of tumor evolution
    • Hoon Kim,
    • Siyuan Zheng,
    • Seyed S. Amini,
    • Selene M. Virk,
    • Tom Mikkelsen,
    • Daniel J. Brat,
    • Jonna Grimsby,
    • Carrie Sougnez,
    • Florian Muller,
    • Jian Hu,
    • Andrew E. Sloan,
    • Mark L. Cohen,
    • Erwin G. Van Meir,
    • Lisa Scarpace,
    • Peter W. Laird,
    • John N. Weinstein,
    • Eric S. Lander,
    • Stacey Gabriel,
    • Gad Getz,
    • Matthew Meyerson,
    • Lynda Chin,
    • Jill S. Barnholtz-Sloan,
    • and Roel G.W. Verhaak
    Genome Res. March 2015 25: 316-327; Published in Advance February 3, 2015, doi:10.1101/gr.180612.114
  7. Research: Somatic retrotransposition in human cancer revealed by whole-genome and exome sequencing
    • Elena Helman,
    • Michael S. Lawrence,
    • Chip Stewart,
    • Carrie Sougnez,
    • Gad Getz,
    • and Matthew Meyerson
    Genome Res. July 2014 24: 1053-1063; Published in Advance May 13, 2014, doi:10.1101/gr.163659.113
  8. Research: Somatic rearrangements across cancer reveal classes of samples with distinct patterns of DNA breakage and rearrangement-induced hypermutability
    • Yotam Drier,
    • Michael S. Lawrence,
    • Scott L. Carter,
    • Chip Stewart,
    • Stacey B. Gabriel,
    • Eric S. Lander,
    • Matthew Meyerson,
    • Rameen Beroukhim,
    • and Gad Getz
    Genome Res. February 2013 23: 228-235; Published in Advance November 2, 2012, doi:10.1101/gr.141382.112
    OPEN ACCESS ARTICLE
  9. Method: Paired-end sequencing of Fosmid libraries by Illumina
    • Louise J.S. Williams,
    • Diana G. Tabbaa,
    • Na Li,
    • Aaron M. Berlin,
    • Terrance P. Shea,
    • Iain MacCallum,
    • Michael S. Lawrence,
    • Yotam Drier,
    • Gad Getz,
    • Sarah K. Young,
    • David B. Jaffe,
    • Chad Nusbaum,
    • and Andreas Gnirke
    Genome Res. November 2012 22: 2241-2249; Published in Advance July 16, 2012, doi:10.1101/gr.138925.112
  10. Research: Integrative analysis of the melanoma transcriptome
    • Michael F. Berger,
    • Joshua Z. Levin,
    • Krishna Vijayendran,
    • Andrey Sivachenko,
    • Xian Adiconis,
    • Jared Maguire,
    • Laura A. Johnson,
    • James Robinson,
    • Roel G. Verhaak,
    • Carrie Sougnez,
    • Robert C. Onofrio,
    • Liuda Ziaugra,
    • Kristian Cibulskis,
    • Elisabeth Laine,
    • Jordi Barretina,
    • Wendy Winckler,
    • David E. Fisher,
    • Gad Getz,
    • Matthew Meyerson,
    • David B. Jaffe,
    • Stacey B. Gabriel,
    • Eric S. Lander,
    • Reinhard Dummer,
    • Andreas Gnirke,
    • Chad Nusbaum,
    • and Levi A. Garraway
    Genome Res. April 2010 20: 413-427; Published in Advance February 23, 2010, doi:10.1101/gr.103697.109
    OPEN ACCESS ARTICLE
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