Searching journal content for Falk Butter in author.

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  1. Resource: A systems view on DNA damage response kinetics in Tetrahymena
    • Emily Nischwitz,
    • Vivien Schoonenberg,
    • Rachel Mullner,
    • Albert Fradera-Sola,
    • Susanne Zimbelmann,
    • Joshua J Smith,
    • and Falk Butter
    Genome Res. January 28, 2026 gr.281000.125; Published in Advance January 28, 2026, doi:10.1101/gr.281000.125
    ACCEPTED MANUSCRIPT
  2. Research: ISWI1 complex proteins facilitate developmental genome editing in Paramecium
    • Aditi Singh,
    • Lilia Häußermann,
    • Christiane Emmerich,
    • Emily Nischwitz,
    • Brandon K.B. Seah,
    • Falk Butter,
    • Mariusz Nowacki,
    • and Estienne C. Swart
    Genome Res. January 2025 35: 93-108; Published in Advance November 14, 2024, doi:10.1101/gr.278402.123
    OPEN ACCESS ARTICLE
  3. Research: E4F1 and ZNF148 are transcriptional activators of the −57A > C and wild-type TERT promoter
    • Boon Haow Chua,
    • Nurkaiyisah Zaal Anuar,
    • Laure Ferry,
    • Cecilia Domrane,
    • Anna Wittek,
    • Vineeth T. Mukundan,
    • Sudhakar Jha,
    • Falk Butter,
    • Daniel G. Tenen,
    • Pierre-Antoine Defossez,
    • and Dennis Kappei
    Genome Res. November 2023 33: 1893-1905; Published in Advance November 2, 2023, doi:10.1101/gr.277724.123
    OPEN ACCESS ARTICLE
  4. Method: Nematode gene annotation by machine-learning-assisted proteotranscriptomics enables proteome-wide evolutionary analysis
    • Alejandro Ceron-Noriega,
    • Miguel V. Almeida,
    • Michal Levin,
    • and Falk Butter
    Genome Res. January 2023 33: 112-128; Published in Advance January 18, 2023, doi:10.1101/gr.277070.122
  5. Research: Transcriptional activity and epigenetic regulation of transposable elements in the symbiotic fungus Rhizophagus irregularis
    • Alexandra Dallaire,
    • Bethan F. Manley,
    • Maya Wilkens,
    • Iliana Bista,
    • Clement Quan,
    • Edouard Evangelisti,
    • Charles R. Bradshaw,
    • Navin B. Ramakrishna,
    • Sebastian Schornack,
    • Falk Butter,
    • Uta Paszkowski,
    • and Eric A. Miska
    Genome Res. December 2021 31: 2290-2302; Published in Advance November 12, 2021, doi:10.1101/gr.275752.121
    OPEN ACCESS ARTICLE
  6. Research: Dynamic RNA–protein interactions underlie the zebrafish maternal-to-zygotic transition
    • Vladimir Despic,
    • Mario Dejung,
    • Mengting Gu,
    • Jayanth Krishnan,
    • Jing Zhang,
    • Lydia Herzel,
    • Korinna Straube,
    • Mark B. Gerstein,
    • Falk Butter,
    • and Karla M. Neugebauer
    Genome Res. July 2017 27: 1184-1194; Published in Advance April 5, 2017, doi:10.1101/gr.215954.116
  7. Resource: The developmental proteome of Drosophila melanogaster
    • Nuria Casas-Vila,
    • Alina Bluhm,
    • Sergi Sayols,
    • Nadja Dinges,
    • Mario Dejung,
    • Tina Altenhein,
    • Dennis Kappei,
    • Benjamin Altenhein,
    • Jean-Yves Roignant,
    • and Falk Butter
    Genome Res. July 2017 27: 1273-1285; Published in Advance April 5, 2017, doi:10.1101/gr.213694.116
  8. Resource: Quantitative interaction screen of telomeric repeat-containing RNA reveals novel TERRA regulators
    • Marion Scheibe,
    • Nausica Arnoult,
    • Dennis Kappei,
    • Frank Buchholz,
    • Anabelle Decottignies,
    • Falk Butter,
    • and Matthias Mann
    Genome Res. December 2013 23: 2149-2157; Published in Advance August 6, 2013, doi:10.1101/gr.151878.112
  9. Method: Quantitative proteomic analysis reveals concurrent RNA–protein interactions and identifies new RNA-binding proteins in Saccharomyces cerevisiae
    • Daniel M. Klass,
    • Marion Scheibe,
    • Falk Butter,
    • Gregory J. Hogan,
    • Matthias Mann,
    • and Patrick O. Brown
    Genome Res. June 2013 23: 1028-1038; Published in Advance May 1, 2013, doi:10.1101/gr.153031.112
    OPEN ACCESS ARTICLE
  10. Methods: A SILAC-based DNA protein interaction screen that identifies candidate binding proteins to functional DNA elements
    • Gerhard Mittler,
    • Falk Butter,
    • and Matthias Mann
    Genome Res. February 2009 19: 284-293; Published in Advance November 17, 2008, doi:10.1101/gr.081711.108
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