Searching journal content for Evan E. Eichler in author.

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  1. Research: Epigenetic and evolutionary features of ape subterminal heterochromatin
    • DongAhn Yoo,
    • Katherine M. Munson,
    • and Evan E. Eichler
    Genome Res. January 2026 36: 38-49; Published in Advance October 22, 2025, doi:10.1101/gr.280987.125
    OPEN ACCESS ARTICLE
  2. Method: Highly accurate assembly polishing with DeepPolisher
    • Mira Mastoras,
    • Mobin Asri,
    • Lucas Brambrink,
    • Prajna Hebbar,
    • Alexey Kolesnikov,
    • Daniel E. Cook,
    • Maria Nattestad,
    • Julian Lucas,
    • Taylor S. Won,
    • Pi-Chuan Chang,
    • Andrew Carroll,
    • Benedict Paten,
    • Kishwar Shafin,
    • and and the Human Pangenome Reference Consortium
    Genome Res. July 2025 35: 1595-1608; Published in Advance May 19, 2025, doi:10.1101/gr.280149.124
  3. Resource: An integrative TAD catalog in lymphoblastoid cell lines discloses the functional impact of deletions and insertions in human genomes
    • Chong Li,
    • Marc Jan Bonder,
    • Sabriya Syed,
    • Matthew Jensen,
    • Human Genome Structural Variation Consortium (HGSVC),
    • HGSVC Functional Analysis Working Group,
    • Mark B. Gerstein,
    • Michael C. Zody,
    • Mark J.P. Chaisson,
    • Michael E. Talkowski,
    • Tobias Marschall,
    • Jan O. Korbel,
    • Evan E. Eichler,
    • Charles Lee,
    • and Xinghua Shi
    Genome Res. December 2024 34: 2304-2318; Published in Advance December 5, 2024, doi:10.1101/gr.279419.124
  4. Resource: High-coverage nanopore sequencing of samples from the 1000 Genomes Project to build a comprehensive catalog of human genetic variation
    • Jonas A. Gustafson,
    • Sophia B. Gibson,
    • Nikhita Damaraju,
    • Miranda P.G. Zalusky,
    • Kendra Hoekzema,
    • David Twesigomwe,
    • Lei Yang,
    • Anthony A. Snead,
    • Phillip A. Richmond,
    • Wouter De Coster,
    • Nathan D. Olson,
    • Andrea Guarracino,
    • Qiuhui Li,
    • Angela L. Miller,
    • Joy Goffena,
    • Zachary B. Anderson,
    • Sophie H.R. Storz,
    • Sydney A. Ward,
    • Maisha Sinha,
    • Claudia Gonzaga-Jauregui,
    • Wayne E. Clarke,
    • Anna O. Basile,
    • André Corvelo,
    • Catherine Reeves,
    • Adrienne Helland,
    • Rajeeva Lochan Musunuri,
    • Mahler Revsine,
    • Karynne E. Patterson,
    • Cate R. Paschal,
    • Christina Zakarian,
    • Sara Goodwin,
    • Tanner D. Jensen,
    • Esther Robb,
    • The 1000 Genomes ONT Sequencing Consortium,
    • University of Washington Center for Rare Disease Research (UW-CRDR),
    • Genomics Research to Elucidate the Genetics of Rare Diseases (GREGoR) Consortium,
    • William Richard McCombie,
    • Fritz J. Sedlazeck,
    • Justin M. Zook,
    • Stephen B. Montgomery,
    • Erik Garrison,
    • Mikhail Kolmogorov,
    • Michael C. Schatz,
    • Richard N. McLaughlin, Jr.,
    • Harriet Dashnow,
    • Michael C. Zody,
    • Matt Loose,
    • Miten Jain,
    • Evan E. Eichler,
    • and Danny E. Miller
    Genome Res. November 2024 34: 2061-2073; Published in Advance October 2, 2024, doi:10.1101/gr.279273.124
    OPEN ACCESS ARTICLE
  5. Research: Independent expansion, selection, and hypervariability of the TBC1D3 gene family in humans
    • Xavi Guitart,
    • David Porubsky,
    • DongAhn Yoo,
    • Max L. Dougherty,
    • Philip C. Dishuck,
    • Katherine M. Munson,
    • Alexandra P. Lewis,
    • Kendra Hoekzema,
    • Jordan Knuth,
    • Stephen Chang,
    • Tomi Pastinen,
    • and Evan E. Eichler
    Genome Res. November 2024 34: 1798-1810; Published in Advance August 6, 2024, doi:10.1101/gr.279299.124
    OPEN ACCESS ARTICLE
  6. Research: AGAP duplicons associate with structural diversity at Chromosome 10q11.22
    • Stefania Fornezza,
    • Vincenza Simona Delvecchio,
    • William T. Harvey,
    • Philip C. Dishuck,
    • Evan E. Eichler,
    • and Giuliana Giannuzzi
    Genome Res. October 2024 34: 1487-1499; Published in Advance September 25, 2024, doi:10.1101/gr.279454.124
  7. Method: Phased nanopore assembly with Shasta and modular graph phasing with GFAse
    • Ryan Lorig-Roach,
    • Melissa Meredith,
    • Jean Monlong,
    • Miten Jain,
    • Hugh E. Olsen,
    • Brandy McNulty,
    • David Porubsky,
    • Tessa G. Montague,
    • Julian K. Lucas,
    • Chris Condon,
    • Jordan M. Eizenga,
    • Sissel Juul,
    • Sean K. McKenzie,
    • Sara E. Simmonds,
    • Jimin Park,
    • Mobin Asri,
    • Sergey Koren,
    • Evan E. Eichler,
    • Richard Axel,
    • Bruce Martin,
    • Paolo Carnevali,
    • Karen H. Miga,
    • and Benedict Paten
    Genome Res. March 2024 34: 454-468; Published in Advance April 16, 2024, doi:10.1101/gr.278268.123
  8. Research: Whole-genome long-read sequencing downsampling and its effect on variant-calling precision and recall
    • William T. Harvey,
    • Peter Ebert,
    • Jana Ebler,
    • Peter A. Audano,
    • Katherine M. Munson,
    • Kendra Hoekzema,
    • David Porubsky,
    • Christine R. Beck,
    • Tobias Marschall,
    • Kiran Garimella,
    • and Evan E. Eichler
    Genome Res. December 2023 33: 2029-2040; Published in Advance December 7, 2023, doi:10.1101/gr.278070.123
    OPEN ACCESS ARTICLE
  9. Research: Gaps and complex structurally variant loci in phased genome assemblies
    • David Porubsky,
    • Mitchell R. Vollger,
    • William T. Harvey,
    • Allison N. Rozanski,
    • Peter Ebert,
    • Glenn Hickey,
    • Patrick Hasenfeld,
    • Ashley D. Sanders,
    • Catherine Stober,
    • Human Pangenome Reference Consortium,
    • Jan O. Korbel,
    • Benedict Paten,
    • Tobias Marschall,
    • and Evan E. Eichler
    Genome Res. April 2023 33: 496-510; Published in Advance May 10, 2023, doi:10.1101/gr.277334.122
    OPEN ACCESS ARTICLE
  10. In memoriam: C. Thomas Caskey (1938–2022)
    • Richard A. Gibbs,
    • Aravinda Chakravarti,
    • Evan E. Eichler,
    • Eric D. Green,
    • Richard M. Myers,
    • Anne C. Ferguson-Smith,
    • Kateryna D. Makova,
    • and Hillary E. Sussman
    Genome Res. March 2022 32: vii-viii; Published in Advance February 17, 2022, doi:10.1101/gr.276658.122
    OPEN ACCESS ARTICLE
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