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Emily Hodges
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Method
:
ATAC-STARR-seq reveals transcription factor–bound activators and silencers within chromatin-accessible regions of the human genome
Tyler J. Hansen
and
Emily Hodges
Genome Res.
August 2022
32
:
1529
-
1541
;
Published in Advance
July 20, 2022
,
doi:
10.1101/gr.276766.122
Abstract
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Corrigendum
:
Corrigendum: Evolutionary expansion of DNA hypomethylation in the mammalian germline genome
Jianghan Qu
,
Emily Hodges
,
Antoine Molaro
,
Pascal Gagneux
,
Matthew D. Dean
,
Gregory J. Hannon
,
and
Andrew D. Smith
Genome Res.
May 2018
28
:
766.2
;
doi:
10.1101/gr.236885.118
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Research
:
Evolutionary expansion of DNA hypomethylation in the mammalian germline genome
Jianghan Qu
,
Emily Hodges
,
Antoine Molaro
,
Pascal Gagneux
,
Matthew D. Dean
,
Gregory J. Hannon
,
and
Andrew D. Smith
Genome Res.
February 2018
28
:
145
-
158
;
Published in Advance
December 19, 2017
,
doi:
10.1101/gr.225896.117
Abstract
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Research
:
De novo DNA demethylation and noncoding transcription define active intergenic regulatory elements
Felix Schlesinger
,
Andrew D. Smith
,
Thomas R. Gingeras
,
Gregory J. Hannon
,
and
Emily Hodges
Genome Res.
October 2013
23
:
1601
-
1614
;
Published in Advance
June 28, 2013
,
doi:
10.1101/gr.157271.113
Abstract
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Research
:
Exome sequencing and disease-network analysis of a single family implicate a mutation in
KIF1A
in hereditary spastic paraparesis
Yaniv Erlich
,
Simon Edvardson
,
Emily Hodges
,
Shamir Zenvirt
,
Pramod Thekkat
,
Avraham Shaag
,
Talya Dor
,
Gregory J. Hannon
,
and
Orly Elpeleg
Genome Res.
May 2011
21
:
658
-
664
;
Published in Advance
April 12, 2011
,
doi:
10.1101/gr.117143.110
Abstract
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Methods
:
High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing
Emily Hodges
,
Andrew D. Smith
,
Jude Kendall
,
Zhenyu Xuan
,
Kandasamy Ravi
,
Michelle Rooks
,
Michael Q. Zhang
,
Kenny Ye
,
Arindam Bhattacharjee
,
Leonardo Brizuela
,
W. Richard McCombie
,
Michael Wigler
,
Gregory J. Hannon
,
and
James B. Hicks
Genome Res.
September 2009
19
:
1593
-
1605
;
Published in Advance
July 6, 2009
,
doi:
10.1101/gr.095190.109
Abstract
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Platypus Special/Letter
:
Conservation of small RNA pathways in platypus
Elizabeth P. Murchison
,
Pouya Kheradpour
,
Ravi Sachidanandam
,
Carly Smith
,
Emily Hodges
,
Zhenyu Xuan
,
Manolis Kellis
,
Frank Grützner
,
Alexander Stark
,
and
Gregory J. Hannon
Genome Res.
June 2008
18
:
995
-
1004
;
Published in Advance
May 7, 2008
,
doi:
10.1101/gr.073056.107
Abstract
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12 Drosophila Genomes/Letter
:
Systematic discovery and characterization of fly microRNAs using 12
Drosophila
genomes
Alexander Stark
,
Pouya Kheradpour
,
Leopold Parts
,
Julius Brennecke
,
Emily Hodges
,
Gregory J. Hannon
,
and
Manolis Kellis
Genome Res.
December 2007
17
:
1865
-
1879
;
Published in Advance
November 7, 2007
,
doi:
10.1101/gr.6593807
Abstract
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Drosophila 12 Genomes
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