Searching journal content for Elia Stupka in author.

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  1. Resource: Dynamic regulation of the transcription initiation landscape at single nucleotide resolution during vertebrate embryogenesis
    • Chirag Nepal,
    • Yavor Hadzhiev,
    • Christopher Previti,
    • Vanja Haberle,
    • Nan Li,
    • Hazuki Takahashi,
    • Ana Maria M. Suzuki,
    • Ying Sheng,
    • Rehab F. Abdelhamid,
    • Santosh Anand,
    • Jochen Gehrig,
    • Altuna Akalin,
    • Christel E.M. Kockx,
    • Antoine A.J. van der Sloot,
    • Wilfred F.J. van IJcken,
    • Olivier Armant,
    • Sepand Rastegar,
    • Craig Watson,
    • Uwe Strähle,
    • Elia Stupka,
    • Piero Carninci,
    • Boris Lenhard,
    • and Ferenc Müller
    Genome Res. November 2013 23: 1938-1950; Published in Advance September 3, 2013, doi:10.1101/gr.153692.112
  2. Research: Comparative methylome analysis of benign and malignant peripheral nerve sheath tumors
    • Andrew Feber,
    • Gareth A. Wilson,
    • Lu Zhang,
    • Nadege Presneau,
    • Bernadine Idowu,
    • Thomas A. Down,
    • Vardhman K. Rakyan,
    • Luke A. Noon,
    • Alison C. Lloyd,
    • Elia Stupka,
    • Vassia Schiza,
    • Andrew E. Teschendorff,
    • Gary P. Schroth,
    • Adrienne Flanagan,
    • and Stephan Beck
    Genome Res. April 2011 21: 515-524; Published in Advance February 1, 2011, doi:10.1101/gr.109678.110
    OPEN ACCESS ARTICLE
  3. RESOURCE: The C. savignyi genetic map and its integration with the reference sequence facilitates insights into chordate genome evolution
    • Matthew M. Hill,
    • Karl W. Broman,
    • Elia Stupka,
    • William C. Smith,
    • Di Jiang,
    • and Arend Sidow
    Genome Res. August 2008 18: 1369-1379; Published in Advance June 2, 2008, doi:10.1101/gr.078576.108
  4. LETTER: A novel view of the transcriptome revealed from gene trapping in mouse embryonic stem cells
    • Guglielmo Roma,
    • Gilda Cobellis,
    • Pamela Claudiani,
    • Francesco Maione,
    • Pedro Cruz,
    • Gaetano Tripoli,
    • Marco Sardiello,
    • Ivana Peluso,
    • and Elia Stupka
    Genome Res. July 2007 17: 1051-1060; Published in Advance May 31, 2007, doi:10.1101/gr.5720807
  5. Methods: Biopipe: A Flexible Framework for Protocol-Based Bioinformatics Analysis
    • Shawn Hoon,
    • Kiran Kumar Ratnapu,
    • Jer-ming Chia,
    • Balamurugan Kumarasamy,
    • Xiao Juguang,
    • Michele Clamp,
    • Arne Stabenau,
    • Simon Potter,
    • Laura Clarke,
    • and Elia Stupka
    Genome Res. August 2003 13: 1904-1915; Published in Advance July 17, 2003, doi:10.1101/gr.1363103
  6. RESOURCE: The Bioperl Toolkit: Perl Modules for the Life Sciences
    • Jason E. Stajich,
    • David Block,
    • Kris Boulez,
    • Steven E. Brenner,
    • Stephen A. Chervitz,
    • Chris Dagdigian,
    • Georg Fuellen,
    • James G.R. Gilbert,
    • Ian Korf,
    • Hilmar Lapp,
    • Heikki Lehväslaiho,
    • Chad Matsalla,
    • Chris J. Mungall,
    • Brian I. Osborne,
    • Matthew R. Pocock,
    • Peter Schattner,
    • Martin Senger,
    • Lincoln D. Stein,
    • Elia Stupka,
    • Mark D. Wilkinson,
    • and Ewan Birney
    Genome Res. October 1, 2002 12: 1611-1618; doi:10.1101/gr.361602
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