Searching journal content for Edwin Cuppen in author.

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  1. Research: Deficiency of nucleotide excision repair is associated with mutational signature observed in cancer
    • Myrthe Jager,
    • Francis Blokzijl,
    • Ewart Kuijk,
    • Johanna Bertl,
    • Maria Vougioukalaki,
    • Roel Janssen,
    • Nicolle Besselink,
    • Sander Boymans,
    • Joep de Ligt,
    • Jakob Skou Pedersen,
    • Jan Hoeijmakers,
    • Joris Pothof,
    • Ruben van Boxtel,
    • and Edwin Cuppen
    Genome Res. July 2019 29: 1067-1077; Published in Advance June 20, 2019, doi:10.1101/gr.246223.118
    OPEN ACCESS ARTICLE
  2. Research: Characteristics of de novo structural changes in the human genome
    • Wigard P. Kloosterman,
    • Laurent C. Francioli,
    • Fereydoun Hormozdiari,
    • Tobias Marschall,
    • Jayne Y. Hehir-Kwa,
    • Abdel Abdellaoui,
    • Eric-Wubbo Lameijer,
    • Matthijs H. Moed,
    • Vyacheslav Koval,
    • Ivo Renkens,
    • Markus J. van Roosmalen,
    • Pascal Arp,
    • Lennart C. Karssen,
    • Bradley P. Coe,
    • Robert E. Handsaker,
    • Eka D. Suchiman,
    • Edwin Cuppen,
    • Djie Tjwan Thung,
    • Mitch McVey,
    • Michael C. Wendl,
    • Genome of the Netherlands Consortium,
    • André Uitterlinden,
    • Cornelia M. van Duijn,
    • Morris A. Swertz,
    • Cisca Wijmenga,
    • GertJan B. van Ommen,
    • P. Eline Slagboom,
    • Dorret I. Boomsma,
    • Alexander Schönhuth,
    • Evan E. Eichler,
    • Paul I.W. de Bakker,
    • Kai Ye,
    • and Victor Guryev
    Genome Res. June 2015 25: 792-801; Published in Advance April 16, 2015, doi:10.1101/gr.185041.114
  3. Research: Natural variation of histone modification and its impact on gene expression in the rat genome
    • Carola Rintisch,
    • Matthias Heinig,
    • Anja Bauerfeind,
    • Sebastian Schafer,
    • Christin Mieth,
    • Giannino Patone,
    • Oliver Hummel,
    • Wei Chen,
    • Stuart Cook,
    • Edwin Cuppen,
    • Maria Colomé-Tatché,
    • Frank Johannes,
    • Ritsert C. Jansen,
    • Helen Neil,
    • Michel Werner,
    • Michal Pravenec,
    • Martin Vingron,
    • and Norbert Hubner
    Genome Res. June 2014 24: 942-953; Published in Advance May 2, 2014, doi:10.1101/gr.169029.113
  4. Research: Genomic and transcriptomic plasticity in treatment-naïve ovarian cancer
    • Marlous Hoogstraat,
    • Mirjam S. de Pagter,
    • Geert A. Cirkel,
    • Markus J. van Roosmalen,
    • Timothy T. Harkins,
    • Karen Duran,
    • Jennifer Kreeftmeijer,
    • Ivo Renkens,
    • Petronella O. Witteveen,
    • Clarence C. Lee,
    • Isaac J. Nijman,
    • Tanisha Guy,
    • Ruben van ’t Slot,
    • Trudy N. Jonges,
    • Martijn P. Lolkema,
    • Marco J. Koudijs,
    • Ronald P. Zweemer,
    • Emile E. Voest,
    • Edwin Cuppen,
    • and Wigard P. Kloosterman
    Genome Res. February 2014 24: 200-211; Published in Advance November 12, 2013, doi:10.1101/gr.161026.113
  5. Method: High-throughput semiquantitative analysis of insertional mutations in heterogeneous tumors
    • Marco J. Koudijs,
    • Christiaan Klijn,
    • Louise van der Weyden,
    • Jaap Kool,
    • Jelle ten Hoeve,
    • Daoud Sie,
    • Pramudita R. Prasetyanti,
    • Eva Schut,
    • Sjors Kas,
    • Theodore Whipp,
    • Edwin Cuppen,
    • Lodewyk Wessels,
    • David J. Adams,
    • and Jos Jonkers
    Genome Res. December 2011 21: 2181-2189; Published in Advance August 18, 2011, doi:10.1101/gr.112763.110
  6. Research: The genome sequence of the spontaneously hypertensive rat: Analysis and functional significance
    • Santosh S. Atanur,
    • İnanç Birol,
    • Victor Guryev,
    • Martin Hirst,
    • Oliver Hummel,
    • Catherine Morrissey,
    • Jacques Behmoaras,
    • Xose M. Fernandez-Suarez,
    • Michelle D. Johnson,
    • William M. McLaren,
    • Giannino Patone,
    • Enrico Petretto,
    • Charles Plessy,
    • Kathleen S. Rockland,
    • Charles Rockland,
    • Kathrin Saar,
    • Yongjun Zhao,
    • Piero Carninci,
    • Paul Flicek,
    • Ted Kurtz,
    • Edwin Cuppen,
    • Michal Pravenec,
    • Norbert Hubner,
    • Steven J.M. Jones,
    • Ewan Birney,
    • and Timothy J. Aitman
    Genome Res. June 2010 20: 791-803; Published in Advance April 29, 2010, doi:10.1101/gr.103499.109
  7. Letter: Repertoire and evolution of miRNA genes in four divergent nematode species
    • Elzo de Wit,
    • Sam E.V. Linsen,
    • Edwin Cuppen,
    • and Eugene Berezikov
    Genome Res. November 2009 19: 2064-2074; Published in Advance September 15, 2009, doi:10.1101/gr.093781.109
  8. Methods: Efficient target-selected mutagenesis in Caenorhabditis elegans: Toward a knockout for every gene
    • Edwin Cuppen,
    • Eelke Gort,
    • Esther Hazendonk,
    • Josine Mudde,
    • José van de Belt,
    • Isaäc J. Nijman,
    • Victor Guryev,
    • and Ronald H.A. Plasterk
    Genome Res. May 2007 17: 649-658; Published in Advance April 6, 2007, doi:10.1101/gr.6080607
  9. Methods: Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis
    • Eugene Berezikov,
    • Geert van Tetering,
    • Mark Verheul,
    • Jose van de Belt,
    • Linda van Laake,
    • Joost Vos,
    • Robert Verloop,
    • Marc van de Wetering,
    • Victor Guryev,
    • Shuji Takada,
    • Anton Jan van Zonneveld,
    • Hiroyuki Mano,
    • Ronald Plasterk,
    • and Edwin Cuppen
    Genome Res. October 2006 16: 1289-1298; Published in Advance September 5, 2006, doi:10.1101/gr.5159906
  10. LETTER: Genetic variation in the zebrafish
    • Victor Guryev,
    • Marco J. Koudijs,
    • Eugene Berezikov,
    • Stephen L. Johnson,
    • Ronald H.A. Plasterk,
    • Fredericus J.M. van Eeden,
    • and Edwin Cuppen
    Genome Res. April 2006 16: 491-497; Published in Advance March 13, 2006, doi:10.1101/gr.4791006
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