Searching journal content for Doreen Ware in author.

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  1. Resource: The PanOryza pangene catalog of Asian cultivated rice
    • Bruno Contreras-Moreira,
    • Eshan Sharma,
    • Shradha Saraf,
    • Guy Naamati,
    • Parul Gupta,
    • Justin Elser,
    • Dmytro Chebotarov,
    • Kapeel Chougule,
    • Zhenyuan Lu,
    • Sharon Wei,
    • Andrew Olson,
    • Ian Tsang,
    • Disha Lodha,
    • Yong Zhou,
    • Zhichao Yu,
    • Wen Zhao,
    • Jianwei Zhang,
    • Sandeep Amberkar,
    • Kawinnat Sue-Ob,
    • Zhi Sun,
    • Maria Martin,
    • Kenneth L. McNally,
    • Doreen Ware,
    • Eric W. Deutsch,
    • Dario Copetti,
    • Rod A. Wing,
    • Pankaj Jaiswal,
    • Sarah Dyer,
    • and Andrew R. Jones
    Genome Res. January 2026 36: 226-238; Published in Advance December 12, 2025, doi:10.1101/gr.280790.125
    OPEN ACCESS ARTICLE
  2. Method: Gapless assembly of complete human and plant chromosomes using only nanopore sequencing
    • Sergey Koren,
    • Zhigui Bao,
    • Andrea Guarracino,
    • Shujun Ou,
    • Sara Goodwin,
    • Katharine M. Jenike,
    • Julian Lucas,
    • Brandy McNulty,
    • Jimin Park,
    • Mikko Rautiainen,
    • Arang Rhie,
    • Dick Roelofs,
    • Harrie Schneiders,
    • Ilse Vrijenhoek,
    • Koen Nijbroek,
    • Olle Nordesjo,
    • Sergey Nurk,
    • Mike Vella,
    • Katherine R. Lawrence,
    • Doreen Ware,
    • Michael C. Schatz,
    • Erik Garrison,
    • Sanwen Huang,
    • William Richard McCombie,
    • Karen H. Miga,
    • Alexander H.J. Wittenberg,
    • and Adam M. Phillippy
    Genome Res. November 2024 34: 1919-1930; Published in Advance November 6, 2024, doi:10.1101/gr.279334.124
  3. Research: A high-resolution gene expression atlas links dedicated meristem genes to key architectural traits
    • Steffen Knauer,
    • Marie Javelle,
    • Lin Li,
    • Xianran Li,
    • Xiaoli Ma,
    • Kokulapalan Wimalanathan,
    • Sunita Kumari,
    • Robyn Johnston,
    • Samuel Leiboff,
    • Robert Meeley,
    • Patrick S. Schnable,
    • Doreen Ware,
    • Carolyn Lawrence-Dill,
    • Jianming Yu,
    • Gary J. Muehlbauer,
    • Michael J. Scanlon,
    • and Marja C.P. Timmermans
    Genome Res. December 2019 29: 1962-1973; Published in Advance November 19, 2019, doi:10.1101/gr.250878.119
    OPEN ACCESS ARTICLE
  4. Resource: A comparative transcriptional landscape of maize and sorghum obtained by single-molecule sequencing
    • Bo Wang,
    • Michael Regulski,
    • Elizabeth Tseng,
    • Andrew Olson,
    • Sara Goodwin,
    • W. Richard McCombie,
    • and Doreen Ware
    Genome Res. June 2018 28: 921-932; Published in Advance April 30, 2018, doi:10.1101/gr.227462.117
    OPEN ACCESS ARTICLE
  5. Research: Regulatory modules controlling maize inflorescence architecture
    • Andrea L. Eveland,
    • Alexander Goldshmidt,
    • Michael Pautler,
    • Kengo Morohashi,
    • Christophe Liseron-Monfils,
    • Michael W. Lewis,
    • Sunita Kumari,
    • Susumu Hiraga,
    • Fang Yang,
    • Erica Unger-Wallace,
    • Andrew Olson,
    • Sarah Hake,
    • Erik Vollbrecht,
    • Erich Grotewold,
    • Doreen Ware,
    • and David Jackson
    Genome Res. March 2014 24: 431-443; Published in Advance December 4, 2013, doi:10.1101/gr.166397.113
  6. Research: The maize methylome influences mRNA splice sites and reveals widespread paramutation-like switches guided by small RNA
    • Michael Regulski,
    • Zhenyuan Lu,
    • Jude Kendall,
    • Mark T.A. Donoghue,
    • Jon Reinders,
    • Victor Llaca,
    • Stephane Deschamps,
    • Andrew Smith,
    • Dan Levy,
    • W. Richard McCombie,
    • Scott Tingey,
    • Antoni Rafalski,
    • James Hicks,
    • Doreen Ware,
    • and Robert A. Martienssen
    Genome Res. October 2013 23: 1651-1662; Published in Advance June 5, 2013, doi:10.1101/gr.153510.112
    OPEN ACCESS ARTICLE
  7. Research: Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor
    • Ruth A. Swanson-Wagner,
    • Steven R. Eichten,
    • Sunita Kumari,
    • Peter Tiffin,
    • Joshua C. Stein,
    • Doreen Ware,
    • and Nathan M. Springer
    Genome Res. December 2010 20: 1689-1699; Published in Advance October 29, 2010, doi:10.1101/gr.109165.110
  8. Resource: Evidence-based gene predictions in plant genomes
    • Chengzhi Liang,
    • Long Mao,
    • Doreen Ware,
    • and Lincoln Stein
    Genome Res. October 2009 19: 1912-1923; Published in Advance June 18, 2009, doi:10.1101/gr.088997.108
  9. LETTER: Evolution of Arabidopsis microRNA families through duplication events
    • Christopher Maher,
    • Lincoln Stein,
    • and Doreen Ware
    Genome Res. April 2006 16: 510-519; Published in Advance March 6, 2006, doi:10.1101/gr.4680506
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