Searching journal content for Deyou Zheng in author.

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  1. Research: Transcription and potential functions of a novel XIST isoform in male peripheral glia
    • Kevin S. O'Leary,
    • Meng-Yen Li,
    • Kevyn Jackson,
    • Lijie Shi,
    • Elena Ezhkova,
    • Bernice E. Morrow,
    • and Deyou Zheng
    Genome Res. February 2026 36: 257-274; Published in Advance December 12, 2025, doi:10.1101/gr.280832.125
    OPEN ACCESS ARTICLE
  2. Research: Pangolin genomes and the evolution of mammalian scales and immunity
    • Siew Woh Choo,
    • Mike Rayko,
    • Tze King Tan,
    • Ranjeev Hari,
    • Aleksey Komissarov,
    • Wei Yee Wee,
    • Andrey A. Yurchenko,
    • Sergey Kliver,
    • Gaik Tamazian,
    • Agostinho Antunes,
    • Richard K. Wilson,
    • Wesley C. Warren,
    • Klaus-Peter Koepfli,
    • Patrick Minx,
    • Ksenia Krasheninnikova,
    • Antoinette Kotze,
    • Desire L. Dalton,
    • Elaine Vermaak,
    • Ian C. Paterson,
    • Pavel Dobrynin,
    • Frankie Thomas Sitam,
    • Jeffrine J. Rovie-Ryan,
    • Warren E. Johnson,
    • Aini Mohamed Yusoff,
    • Shu-Jin Luo,
    • Kayal Vizi Karuppannan,
    • Gang Fang,
    • Deyou Zheng,
    • Mark B. Gerstein,
    • Leonard Lipovich,
    • Stephen J. O'Brien,
    • and Guat Jah Wong
    Genome Res. October 2016 26: 1312-1322; Published in Advance August 10, 2016, doi:10.1101/gr.203521.115
  3. ARTICLE: The DART classification of unannotated transcription within the ENCODE regions: Associating transcription with known and novel loci
    • Joel S. Rozowsky,
    • Daniel Newburger,
    • Fred Sayward,
    • Jiaqian Wu,
    • Greg Jordan,
    • Jan O. Korbel,
    • Ugrappa Nagalakshmi,
    • Jin Yang,
    • Deyou Zheng,
    • Roderic Guigó,
    • Thomas R. Gingeras,
    • Sherman Weissman,
    • Perry Miller,
    • Michael Snyder,
    • and Mark B. Gerstein
    Genome Res. June 2007 17: 732-745; doi:10.1101/gr.5696007
    OPEN ACCESS ARTICLE
  4. LETTER: Pseudogenes in the ENCODE regions: Consensus annotation, analysis of transcription, and evolution
    • Deyou Zheng,
    • Adam Frankish,
    • Robert Baertsch,
    • Philipp Kapranov,
    • Alexandre Reymond,
    • Siew Woh Choo,
    • Yontao Lu,
    • France Denoeud,
    • Stylianos E. Antonarakis,
    • Michael Snyder,
    • Yijun Ruan,
    • Chia-Lin Wei,
    • Thomas R. Gingeras,
    • Roderic Guigó,
    • Jennifer Harrow,
    • and Mark B. Gerstein
    Genome Res. June 2007 17: 839-851; doi:10.1101/gr.5586307
    OPEN ACCESS ARTICLE
  5. Methods: Assessing the performance of different high-density tiling microarray strategies for mapping transcribed regions of the human genome
    • Olof Emanuelsson,
    • Ugrappa Nagalakshmi,
    • Deyou Zheng,
    • Joel S. Rozowsky,
    • Alexander E. Urban,
    • Jiang Du,
    • Zheng Lian,
    • Viktor Stolc,
    • Sherman Weissman,
    • Michael Snyder,
    • and Mark B. Gerstein
    Genome Res. June 2007 17: 886-897; Published in Advance November 21, 2006, doi:10.1101/gr.5014606
    OPEN ACCESS ARTICLE
  6. ARTICLE: Integrated analysis of experimental data sets reveals many novel promoters in 1% of the human genome
    • Nathan D. Trinklein,
    • Ulaş Karaöz,
    • Jiaqian Wu,
    • Anason Halees,
    • Shelley Force Aldred,
    • Patrick J. Collins,
    • Deyou Zheng,
    • Zhengdong D. Zhang,
    • Mark B. Gerstein,
    • Michael Snyder,
    • Richard M. Myers,
    • and Zhiping Weng
    Genome Res. June 2007 17: 720-731; doi:10.1101/gr.5716607
    OPEN ACCESS ARTICLE
  7. PERSPECTIVE: What is a gene, post-ENCODE? History and updated definition
    • Mark B. Gerstein,
    • Can Bruce,
    • Joel S. Rozowsky,
    • Deyou Zheng,
    • Jiang Du,
    • Jan O. Korbel,
    • Olof Emanuelsson,
    • Zhengdong D. Zhang,
    • Sherman Weissman,
    • and Michael Snyder
    Genome Res. June 2007 17: 669-681; doi:10.1101/gr.6339607
    OPEN ACCESS ARTICLE
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