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David Gordon
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Method
:
Comparative Annotation Toolkit (CAT)—simultaneous clade and personal genome annotation
Ian T. Fiddes
,
Joel Armstrong
,
Mark Diekhans
,
Stefanie Nachtweide
,
Zev N. Kronenberg
,
Jason G. Underwood
,
David Gordon
,
Dent Earl
,
Thomas Keane
,
Evan E. Eichler
,
David Haussler
,
Mario Stanke
,
and
Benedict Paten
Genome Res.
July 2018
28
:
1029
-
1038
;
Published in Advance
June 8, 2018
,
doi:
10.1101/gr.233460.117
Abstract
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Corrigendum
:
Corrigendum: Discovery and genotyping of structural variation from long-read haploid genome sequence data
John Huddleston
,
Mark J.P. Chaisson
,
Karyn Meltz Steinberg
,
Wes Warren
,
Kendra Hoekzema
,
David Gordon
,
Tina A. Graves-Lindsay
,
Katherine M. Munson
,
Zev N. Kronenberg
,
Laura Vives
,
Paul Peluso
,
Matthew Boitano
,
Chen-Shin Chin
,
Jonas Korlach
,
Richard K. Wilson
,
and
Evan E. Eichler
Genome Res.
January 2018
28
:
144
;
doi:
10.1101/gr.233007.117
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Research
:
Discovery and genotyping of structural variation from long-read haploid genome sequence data
John Huddleston
,
Mark J.P. Chaisson
,
Karyn Meltz Steinberg
,
Wes Warren
,
Kendra Hoekzema
,
David Gordon
,
Tina A. Graves-Lindsay
,
Katherine M. Munson
,
Zev N. Kronenberg
,
Laura Vives
,
Paul Peluso
,
Matthew Boitano
,
Chen-Shin Chin
,
Jonas Korlach
,
Richard K. Wilson
,
and
Evan E. Eichler
Genome Res.
May 2017
27
:
677
-
685
;
Published in Advance
November 28, 2016
,
doi:
10.1101/gr.214007.116
Abstract
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LETTER
:
Characterization and predictive discovery of evolutionarily conserved mammalian alternative promoters
Daehyun Baek
,
Colleen Davis
,
Brent Ewing
,
David Gordon
,
and
Phil Green
Genome Res.
February 2007
17
:
145
-
155
;
Published in Advance
January 8, 2007
,
doi:
10.1101/gr.5872707
Abstract
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RESOURCE
:
Assembly, Annotation, and Integration of UNIGENE Clusters into the Human Genome Draft
Degen Zhuo
,
Wei D. Zhao
,
Fred A. Wright
,
Hee-Yung Yang
,
Jian-Ping Wang
,
Russell Sears
,
Troy Baer
,
Do-Hun Kwon
,
David Gordon
,
Solomon Gibbs
,
Dean Dai
,
Qing Yang
,
Joe Spitzner
,
Ralf Krahe
,
Don Stredney
,
Al Stutz
,
and
Bo Yuan
Genome Res.
May 1, 2001
11
:
904
-
918
;
Published in Advance
April 11, 2001
,
doi:
10.1101/gr.164501
Abstract
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METHODS
:
Automated Finishing with Autofinish
David Gordon
,
Cindy Desmarais
,
and
Phil Green
Genome Res.
April 1, 2001
11
:
614
-
625
;
doi:
10.1101/gr.171401
Abstract
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RESEARCH
:
Consed:
A Graphical Tool for Sequence Finishing
David Gordon
,
Chris Abajian
,
and
Phil Green
Genome Res.
March 1, 1998
8
:
195
-
202
;
doi:
10.1101/gr.8.3.195
Abstract
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