Skip to main page content
HOME
ABOUT
ARCHIVE
SUBMIT
SUBSCRIBE
ADVERTISE
AUTHOR INFO
CONTACT
HELP
Search for Keyword:
GO
Advanced Search
Searching
journal content
for
D. Benjamin Gordon
in
author
.
Displaying results 1-9 of
9
For checked items
view abstracts
download to citation manager
Select this article
Method
:
Comparative Annotation Toolkit (CAT)—simultaneous clade and personal genome annotation
Ian T. Fiddes
,
Joel Armstrong
,
Mark Diekhans
,
Stefanie Nachtweide
,
Zev N. Kronenberg
,
Jason G. Underwood
,
David Gordon
,
Dent Earl
,
Thomas Keane
,
Evan E. Eichler
,
David Haussler
,
Mario Stanke
,
and
Benedict Paten
Genome Res.
July 2018
28
:
1029
-
1038
;
Published in Advance
June 8, 2018
,
doi:
10.1101/gr.233460.117
Abstract
Full Text
Full Text (PDF)
Supplemental Material
Select this article
Corrigendum
:
Corrigendum: Discovery and genotyping of structural variation from long-read haploid genome sequence data
John Huddleston
,
Mark J.P. Chaisson
,
Karyn Meltz Steinberg
,
Wes Warren
,
Kendra Hoekzema
,
David Gordon
,
Tina A. Graves-Lindsay
,
Katherine M. Munson
,
Zev N. Kronenberg
,
Laura Vives
,
Paul Peluso
,
Matthew Boitano
,
Chen-Shin Chin
,
Jonas Korlach
,
Richard K. Wilson
,
and
Evan E. Eichler
Genome Res.
January 2018
28
:
144
;
doi:
10.1101/gr.233007.117
Extract
Full Text
Full Text (PDF)
OPEN ACCESS ARTICLE
Select this article
Research
:
Discovery and genotyping of structural variation from long-read haploid genome sequence data
John Huddleston
,
Mark J.P. Chaisson
,
Karyn Meltz Steinberg
,
Wes Warren
,
Kendra Hoekzema
,
David Gordon
,
Tina A. Graves-Lindsay
,
Katherine M. Munson
,
Zev N. Kronenberg
,
Laura Vives
,
Paul Peluso
,
Matthew Boitano
,
Chen-Shin Chin
,
Jonas Korlach
,
Richard K. Wilson
,
and
Evan E. Eichler
Genome Res.
May 2017
27
:
677
-
685
;
Published in Advance
November 28, 2016
,
doi:
10.1101/gr.214007.116
Abstract
Full Text
Full Text (PDF)
Supplemental Material
Select this article
Resource
:
The pig X and Y Chromosomes: structure, sequence, and evolution
Benjamin M. Skinner
,
Carole A. Sargent
,
Carol Churcher
,
Toby Hunt
,
Javier Herrero
,
Jane E. Loveland
,
Matt Dunn
,
Sandra Louzada
,
Beiyuan Fu
,
William Chow
,
James Gilbert
,
Siobhan Austin-Guest
,
Kathryn Beal
,
Denise Carvalho-Silva
,
William Cheng
,
Daria Gordon
,
Darren Grafham
,
Matt Hardy
,
Jo Harley
,
Heidi Hauser
,
Philip Howden
,
Kerstin Howe
,
Kim Lachani
,
Peter J.I. Ellis
,
Daniel Kelly
,
Giselle Kerry
,
James Kerwin
,
Bee Ling Ng
,
Glen Threadgold
,
Thomas Wileman
,
Jonathan M.D. Wood
,
Fengtang Yang
,
Jen Harrow
,
Nabeel A. Affara
,
and
Chris Tyler-Smith
Genome Res.
January 2016
26
:
130
-
139
;
Published in Advance
November 11, 2015
,
doi:
10.1101/gr.188839.114
Abstract
Full Text
Full Text (PDF)
Supplemental Material
OPEN ACCESS ARTICLE
Select this article
LETTER
:
Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets
David S. Johnson
,
Wei Li
,
D. Benjamin Gordon
,
Arindam Bhattacharjee
,
Bo Curry
,
Jayati Ghosh
,
Leonardo Brizuela
,
Jason S. Carroll
,
Myles Brown
,
Paul Flicek
,
Christoph M. Koch
,
Ian Dunham
,
Mark Bieda
,
Xiaoqin Xu
,
Peggy J. Farnham
,
Philipp Kapranov
,
David A. Nix
,
Thomas R. Gingeras
,
Xinmin Zhang
,
Heather Holster
,
Nan Jiang
,
Roland D. Green
,
Jun S. Song
,
Scott A. McCuine
,
Elizabeth Anton
,
Loan Nguyen
,
Nathan D. Trinklein
,
Zhen Ye
,
Keith Ching
,
David Hawkins
,
Bing Ren
,
Peter C. Scacheri
,
Joel Rozowsky
,
Alexander Karpikov
,
Ghia Euskirchen
,
Sherman Weissman
,
Mark Gerstein
,
Michael Snyder
,
Annie Yang
,
Zarmik Moqtaderi
,
Heather Hirsch
,
Hennady P. Shulha
,
Yutao Fu
,
Zhiping Weng
,
Kevin Struhl
,
Richard M. Myers
,
Jason D. Lieb
,
and
X. Shirley Liu
Genome Res.
March 2008
18
:
393
-
403
;
Published in Advance
February 7, 2008
,
doi:
10.1101/gr.7080508
Abstract
Full Text
Full Text (PDF)
Supplemental Reseach Data
Select this article
LETTER
:
Characterization and predictive discovery of evolutionarily conserved mammalian alternative promoters
Daehyun Baek
,
Colleen Davis
,
Brent Ewing
,
David Gordon
,
and
Phil Green
Genome Res.
February 2007
17
:
145
-
155
;
Published in Advance
January 8, 2007
,
doi:
10.1101/gr.5872707
Abstract
Full Text
Full Text (PDF)
Supplemental Research Data
OPEN ACCESS ARTICLE
Select this article
RESOURCE
:
Assembly, Annotation, and Integration of UNIGENE Clusters into the Human Genome Draft
Degen Zhuo
,
Wei D. Zhao
,
Fred A. Wright
,
Hee-Yung Yang
,
Jian-Ping Wang
,
Russell Sears
,
Troy Baer
,
Do-Hun Kwon
,
David Gordon
,
Solomon Gibbs
,
Dean Dai
,
Qing Yang
,
Joe Spitzner
,
Ralf Krahe
,
Don Stredney
,
Al Stutz
,
and
Bo Yuan
Genome Res.
May 1, 2001
11
:
904
-
918
;
Published in Advance
April 11, 2001
,
doi:
10.1101/gr.164501
Abstract
Full Text
Full Text (PDF)
Select this article
METHODS
:
Automated Finishing with Autofinish
David Gordon
,
Cindy Desmarais
,
and
Phil Green
Genome Res.
April 1, 2001
11
:
614
-
625
;
doi:
10.1101/gr.171401
Abstract
Full Text
Full Text (PDF)
Select this article
RESEARCH
:
Consed:
A Graphical Tool for Sequence Finishing
David Gordon
,
Chris Abajian
,
and
Phil Green
Genome Res.
March 1, 1998
8
:
195
-
202
;
doi:
10.1101/gr.8.3.195
Abstract
Full Text
Full Text (PDF)
For checked items
view abstracts
download to citation manager
Search Results
New Search
Modify Results
Citation format:
standard
condensed
Results / page:
10
25
40
60
80
Results order:
relevance
most recent
earliest first
This search
Alert me
when new articles matching this search are published
Download all
citations on this page to my citation manager
Preprint Server
Current Issue
March 2026, 36 (3)
In This Issue
Single-cell gene signature scoring
Chromosome engineering in 8p syndrome
Convergent evolution in arid rodents
Short tandem repeat genotyping using long reads
Spectral component approach for recent population structure
Alert me to new issues of
Genome Research
Advance Online Articles
Submit a Manuscript
GR in the News
Editorial Board
Permissions
E-mail Alerts & RSS Feeds
Recommend to Your Library
Job Opportunities