Searching journal content for Christina Boucher in author.

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  1. Method: Robust 16S rRNA classification based on a compressed LCA index
    • Omar Ahmed,
    • Christina Boucher,
    • and Ben Langmead
    Genome Res. December 2025 35: 2650-2660; Published in Advance August 25, 2025, doi:10.1101/gr.279846.124
  2. Method: Long-read reconstruction of many diverse haplotypes with devider
    • Jim Shaw,
    • Christina Boucher,
    • Yun William Yu,
    • Noelle Noyes,
    • and Heng Li
    Genome Res. December 2025 35: 2637-2649; Published in Advance September 23, 2025, doi:10.1101/gr.280510.125
  3. Method: Highly accurate assembly polishing with DeepPolisher
    • Mira Mastoras,
    • Mobin Asri,
    • Lucas Brambrink,
    • Prajna Hebbar,
    • Alexey Kolesnikov,
    • Daniel E. Cook,
    • Maria Nattestad,
    • Julian Lucas,
    • Taylor S. Won,
    • Pi-Chuan Chang,
    • Andrew Carroll,
    • Benedict Paten,
    • Kishwar Shafin,
    • and and the Human Pangenome Reference Consortium
    Genome Res. July 2025 35: 1595-1608; Published in Advance May 19, 2025, doi:10.1101/gr.280149.124
  4. Method: Accurate short-read alignment through r-index-based pangenome indexing
    • Rahul Varki,
    • Massimiliano Rossi,
    • Eddie Ferro,
    • Marco Oliva,
    • Erik Garrison,
    • Ben Langmead,
    • and Christina Boucher
    Genome Res. July 2025 35: 1609-1620; Published in Advance June 12, 2025, doi:10.1101/gr.279858.124
    OPEN ACCESS ARTICLE
  5. Method: Factors impacting target-enriched long-read sequencing of resistomes and mobilomes
    • Ilya B. Slizovskiy,
    • Nathalie Bonin,
    • Jonathan E. Bravo,
    • Peter M. Ferm,
    • Jacob Singer,
    • Christina Boucher,
    • and Noelle R. Noyes
    Genome Res. November 2024 34: 2048-2060; Published in Advance November 5, 2024, doi:10.1101/gr.279226.124
    OPEN ACCESS ARTICLE
  6. Method: Efficient taxa identification using a pangenome index
    • Omar Ahmed,
    • Massimiliano Rossi,
    • Christina Boucher,
    • and Ben Langmead
    Genome Res. July 2023 33: 1069-1077; Published in Advance May 31, 2023, doi:10.1101/gr.277642.123
    OPEN ACCESS ARTICLE
  7. Review: Data structures based on k-mers for querying large collections of sequencing data sets
    • Camille Marchet,
    • Christina Boucher,
    • Simon J. Puglisi,
    • Paul Medvedev,
    • Mikaël Salson,
    • and Rayan Chikhi
    Genome Res. January 2021 31: 1-12; Published in Advance December 16, 2020, doi:10.1101/gr.260604.119
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