Searching journal content for Christian D. Haudenschild in author.

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  1. Research: De novo rates and selection of large copy number variation
    • Andy Itsara,
    • Hao Wu,
    • Joshua D. Smith,
    • Deborah A. Nickerson,
    • Isabelle Romieu,
    • Stephanie J. London,
    • and Evan E. Eichler
    Genome Res. November 2010 20: 1469-1481; Published in Advance September 14, 2010, doi:10.1101/gr.107680.110
    ...De novo rates and selection of large copy number variation Andy Itsara 1 , Hao Wu 2 , Joshua D. Smith 1 , Deborah A. Nickerson 1 , Isabelle Romieu 3 , 5 , Stephanie J. London 2 and Evan E. Eichler 1 , 4 , 6...
  2. Method: Copy number variation detection and genotyping from exome sequence data
    • Niklas Krumm,
    • Peter H. Sudmant,
    • Arthur Ko,
    • Brian J. O'Roak,
    • Maika Malig,
    • Bradley P. Coe,
    • NHLBI Exome Sequencing Project,
    • Aaron R. Quinlan,
    • Deborah A. Nickerson,
    • and Evan E. Eichler
    Genome Res. August 2012 22: 1525-1532; Published in Advance May 14, 2012, doi:10.1101/gr.138115.112
    ..., Aaron R. Quinlan 3 , Deborah A. Nickerson 1 and Evan E. Eichler 1 , 4 , 5 1 Department of Genome Sciences, University of Washington School of Medicine, Seattle, Washington 98195, USA; 2 NHLBI Exome Sequencing Project, National Heart Lung...
  3. LETTER: Identification of Candidate Coding Region Single Nucleotide Polymorphisms in 165 Human Genes Using Assembled Expressed Sequence Tags
    • Kavita Garg,
    • Philip Green,
    • and Deborah A. Nickerson
    Genome Res. November 1, 1999 9: 1087-1092; doi:10.1101/gr.9.11.1087
    ...Identification of Candidate Coding Region Single Nucleotide Polymorphisms in 165 Human Genes Using Assembled Expressed Sequence Tags Kavita Garg 1 , 2 , Philip Green 1 , and Deborah A. Nickerson 1 1Department of Molecular Biotechnology...
  4. LETTER: Genomic regions exhibiting positive selection identified from dense genotype data
    • Christopher S. Carlson,
    • Daryl J. Thomas,
    • Michael A. Eberle,
    • Johanna E. Swanson,
    • Robert J. Livingston,
    • Mark J. Rieder,
    • and Deborah A. Nickerson
    Genome Res. November 2005 15: 1553-1565; doi:10.1101/gr.4326505
    ..., and Deborah A. Nickerson 1 1 Department of Genome Sciences, University of Washington, Seattle, Washington 98195-7730, USA 2 Center for Biomolecular Science and Engineering, University of California, Santa Cruz, California 95064-1099, USA Abstract The allele...
  5. Methods: A method for rapid, targeted CNV genotyping identifies rare variants associated with neurocognitive disease
    • Heather C. Mefford,
    • Gregory M. Cooper,
    • Troy Zerr,
    • Joshua D. Smith,
    • Carl Baker,
    • Neil Shafer,
    • Erik C. Thorland,
    • Cindy Skinner,
    • Charles E. Schwartz,
    • Deborah A. Nickerson,
    • and Evan E. Eichler
    Genome Res. September 2009 19: 1579-1585; Published in Advance June 8, 2009, doi:10.1101/gr.094987.109
    ...2 , Erik C. Thorland 3 , Cindy Skinner 4 , Charles E. Schwartz 4 , Deborah A. Nickerson 2 and Evan E. Eichler 2 , 5 , 7 1 Department of Pediatrics, University of Washington, Seattle, Washington 98195, USA; 2...
  6. ARTICLE: Pattern of Sequence Variation Across 213 Environmental Response Genes
    • Robert J. Livingston,
    • Andrew von Niederhausern,
    • Anil G. Jegga,
    • Dana C. Crawford,
    • Christopher S. Carlson,
    • Mark J. Rieder,
    • Sivakumar Gowrisankar,
    • Bruce J. Aronow,
    • Robert B. Weiss,
    • and Deborah A. Nickerson
    Genome Res. October 2004 14: 1821-1831; Published in Advance September 13, 2004, doi:10.1101/gr.2730004
    ...Gowrisankar 3 , Bruce J. Aronow 3 , Robert B. Weiss 2 , and Deborah A. Nickerson 1 , 4 1 Department of Genome Sciences, University of Washington, Seattle, Washington 98195-7730, USA 2 Department of Human Genetics, University of Utah, Salt...
  7. LETTER: Sequence Diversity and Large-Scale Typing of SNPs in the Human Apolipoprotein E Gene
    • Deborah A. Nickerson,
    • Scott L. Taylor,
    • Stephanie M. Fullerton,
    • Kenneth M. Weiss,
    • Andrew G. Clark,
    • Jari H. Stengård,
    • Veikko Salomaa,
    • Eric Boerwinkle,
    • and Charles F. Sing
    Genome Res. October 1, 2000 10: 1532-1545; doi:10.1101/gr.146900
    ...Sequence Diversity and Large-Scale Typing of SNPs in the Human Apolipoprotein E Gene Deborah A. Nickerson 1 , 7 , Scott L. Taylor 1 , Stephanie M. Fullerton 2 , 3 , Kenneth M. Weiss 2 , Andrew G. Clark 3 , Jari H. Stengård 4...
  8. METHODS: Mining SNPs From EST Databases
    • Leslie Picoult-Newberg,
    • Trey E. Ideker,
    • Mark G. Pohl,
    • Scott L. Taylor,
    • Miriam A. Donaldson,
    • Deborah A. Nickerson,
    • and Michael Boyce-Jacino
    Genome Res. February 1, 1999 9: 167-174; doi:10.1101/gr.9.2.167
    ...Mining SNPs From EST Databases Leslie Picoult-Newberg 1 , 3 , Trey E. Ideker 2 , Mark G. Pohl 1 , Scott L. Taylor 2 , Miriam A. Donaldson 1 , Deborah A. Nickerson 2 , and Michael Boyce-Jacino 1 1Orchid...
  9. Research: BRF1 mutations alter RNA polymerase III–dependent transcription and cause neurodevelopmental anomalies
    • Guntram Borck,
    • Friederike Hög,
    • Maria Lisa Dentici,
    • Perciliz L. Tan,
    • Nadine Sowada,
    • Ana Medeira,
    • Lucie Gueneau,
    • Holger Thiele,
    • Maria Kousi,
    • Francesca Lepri,
    • Larissa Wenzeck,
    • Ian Blumenthal,
    • Antonio Radicioni,
    • Tito Livio Schwarzenberg,
    • Barbara Mandriani,
    • Rita Fischetto,
    • Deborah J. Morris-Rosendahl,
    • Janine Altmüller,
    • Alexandre Reymond,
    • Peter Nürnberg,
    • Giuseppe Merla,
    • Bruno Dallapiccola,
    • Nicholas Katsanis,
    • Patrick Cramer,
    • and Christian Kubisch
    Genome Res. February 2015 25: 155-166; Published in Advance January 5, 2015, doi:10.1101/gr.176925.114
    ...Mandriani 11 , 12 , Rita Fischetto 13 , Deborah J. Morris-Rosendahl 14 , Janine Altmüller 7 , 15 , Alexandre Reymond 6 , Peter Nürnberg 7 , 16 , 17 , Giuseppe Merla 11 , Bruno Dallapiccola 3 , 21...
  10. RESOURCE: The Generic Genome Browser: A Building Block for a Model Organism System Database
    • Lincoln D. Stein,
    • Christopher Mungall,
    • ShengQiang Shu,
    • Michael Caudy,
    • Marco Mangone,
    • Allen Day,
    • Elizabeth Nickerson,
    • Jason E. Stajich,
    • Todd W. Harris,
    • Adrian Arva,
    • and Suzanna Lewis
    Genome Res. October 1, 2002 12: 1599-1610; doi:10.1101/gr.403602
    ...The Generic Genome Browser: A Building Block for a Model Organism System Database Lincoln D. Stein 1 , 5 , Christopher Mungall 2 , ShengQiang Shu 2 , Michael Caudy 3 , Marco Mangone 1 , Allen Day 1 , Elizabeth Nickerson 1...
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