Searching journal content for Carl C. Baker in author.

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  1. Research: Gaps and complex structurally variant loci in phased genome assemblies
    • David Porubsky,
    • Mitchell R. Vollger,
    • William T. Harvey,
    • Allison N. Rozanski,
    • Peter Ebert,
    • Glenn Hickey,
    • Patrick Hasenfeld,
    • Ashley D. Sanders,
    • Catherine Stober,
    • Human Pangenome Reference Consortium,
    • Jan O. Korbel,
    • Benedict Paten,
    • Tobias Marschall,
    • and Evan E. Eichler
    Genome Res. April 2023 33: 496-510; Published in Advance May 10, 2023, doi:10.1101/gr.277334.122
    OPEN ACCESS ARTICLE
  2. Research: Interchromosomal core duplicons drive both evolutionary instability and disease susceptibility of the Chromosome 8p23.1 region
    • Kiana Mohajeri,
    • Stuart Cantsilieris,
    • John Huddleston,
    • Bradley J. Nelson,
    • Bradley P. Coe,
    • Catarina D. Campbell,
    • Carl Baker,
    • Lana Harshman,
    • Katherine M. Munson,
    • Zev N. Kronenberg,
    • Milinn Kremitzki,
    • Archana Raja,
    • Claudia Rita Catacchio,
    • Tina A. Graves,
    • Richard K. Wilson,
    • Mario Ventura,
    • and Evan E. Eichler
    Genome Res. November 2016 26: 1453-1467; Published in Advance October 7, 2016, doi:10.1101/gr.211284.116
  3. Research: Evolution and diversity of copy number variation in the great ape lineage
    • Peter H. Sudmant,
    • John Huddleston,
    • Claudia R. Catacchio,
    • Maika Malig,
    • LaDeana W. Hillier,
    • Carl Baker,
    • Kiana Mohajeri,
    • Ivanela Kondova,
    • Ronald E. Bontrop,
    • Stephan Persengiev,
    • Francesca Antonacci,
    • Mario Ventura,
    • Javier Prado-Martinez,
    • Great Ape Genome Project,
    • Tomas Marques-Bonet,
    • and Evan E. Eichler
    Genome Res. September 2013 23: 1373-1382; Published in Advance July 3, 2013, doi:10.1101/gr.158543.113
  4. Research: Copy number variation analysis in the great apes reveals species-specific patterns of structural variation
    • Elodie Gazave,
    • Fleur Darré,
    • Carlos Morcillo-Suarez,
    • Natalia Petit-Marty,
    • Angel Carreño,
    • Urko M. Marigorta,
    • Oliver A. Ryder,
    • Antoine Blancher,
    • Mariano Rocchi,
    • Elena Bosch,
    • Carl Baker,
    • Tomàs Marquès-Bonet,
    • Evan E. Eichler,
    • and Arcadi Navarro
    Genome Res. October 2011 21: 1626-1639; Published in Advance August 8, 2011, doi:10.1101/gr.117242.110
  5. Research: Gorilla genome structural variation reveals evolutionary parallelisms with chimpanzee
    • Mario Ventura,
    • Claudia R. Catacchio,
    • Can Alkan,
    • Tomas Marques-Bonet,
    • Saba Sajjadian,
    • Tina A. Graves,
    • Fereydoun Hormozdiari,
    • Arcadi Navarro,
    • Maika Malig,
    • Carl Baker,
    • Choli Lee,
    • Emily H. Turner,
    • Lin Chen,
    • Jeffrey M. Kidd,
    • Nicoletta Archidiacono,
    • Jay Shendure,
    • Richard K. Wilson,
    • and Evan E. Eichler
    Genome Res. October 2011 21: 1640-1649; Published in Advance June 17, 2011, doi:10.1101/gr.124461.111
  6. Resource: The NIH Human Microbiome Project
    • The NIH HMP Working Group,
    • Jane Peterson,
    • Susan Garges,
    • Maria Giovanni,
    • Pamela McInnes,
    • Lu Wang,
    • Jeffery A. Schloss,
    • Vivien Bonazzi,
    • Jean E. McEwen,
    • Kris A. Wetterstrand,
    • Carolyn Deal,
    • Carl C. Baker,
    • Valentina Di Francesco,
    • T. Kevin Howcroft,
    • Robert W. Karp,
    • R. Dwayne Lunsford,
    • Christopher R. Wellington,
    • Tsegahiwot Belachew,
    • Michael Wright,
    • Christina Giblin,
    • Hagit David,
    • Melody Mills,
    • Rachelle Salomon,
    • Christopher Mullins,
    • Beena Akolkar,
    • Lisa Begg,
    • Cindy Davis,
    • Lindsey Grandison,
    • Michael Humble,
    • Jag Khalsa,
    • A. Roger Little,
    • Hannah Peavy,
    • Carol Pontzer,
    • Matthew Portnoy,
    • Michael H. Sayre,
    • Pamela Starke-Reed,
    • Samir Zakhari,
    • Jennifer Read,
    • Bracie Watson,
    • and Mark Guyer
    Genome Res. December 2009 19: 2317-2323; Published in Advance October 9, 2009, doi:10.1101/gr.096651.109
    OPEN ACCESS ARTICLE
  7. Methods: A method for rapid, targeted CNV genotyping identifies rare variants associated with neurocognitive disease
    • Heather C. Mefford,
    • Gregory M. Cooper,
    • Troy Zerr,
    • Joshua D. Smith,
    • Carl Baker,
    • Neil Shafer,
    • Erik C. Thorland,
    • Cindy Skinner,
    • Charles E. Schwartz,
    • Deborah A. Nickerson,
    • and Evan E. Eichler
    Genome Res. September 2009 19: 1579-1585; Published in Advance June 8, 2009, doi:10.1101/gr.094987.109
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