Searching journal content for Brenton R. Graveley in author.

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  1. Corrigendum: Corrigendum: Tempo and mode of regulatory evolution in Drosophila
    • Joseph D. Coolon,
    • C. Joel McManus,
    • Kraig R. Stevenson,
    • Brenton R. Graveley,
    • and Patricia J. Wittkopp
    Genome Res. November 2018 28: 1766; doi:10.1101/gr.244087.118
    OPEN ACCESS ARTICLE
  2. Research: Extensive cross-regulation of post-transcriptional regulatory networks in Drosophila
    • Marcus H. Stoiber,
    • Sara Olson,
    • Gemma E. May,
    • Michael O. Duff,
    • Jan Manent,
    • Robert Obar,
    • K.G. Guruharsha,
    • Peter J. Bickel,
    • Spyros Artavanis-Tsakonas,
    • James B. Brown,
    • Brenton R. Graveley,
    • and Susan E. Celniker
    Genome Res. November 2015 25: 1692-1702; Published in Advance August 20, 2015, doi:10.1101/gr.182675.114
    OPEN ACCESS ARTICLE
  3. Resource: Regulation of alternative splicing in Drosophila by 56 RNA binding proteins
    • Angela N. Brooks,
    • Michael O. Duff,
    • Gemma May,
    • Li Yang,
    • Mohan Bolisetty,
    • Jane Landolin,
    • Ken Wan,
    • Jeremy Sandler,
    • Benjamin W. Booth,
    • Susan E. Celniker,
    • Brenton R. Graveley,
    • and Steven E. Brenner
    Genome Res. November 2015 25: 1771-1780; Published in Advance August 20, 2015, doi:10.1101/gr.192518.115
    OPEN ACCESS ARTICLE
  4. Resource: Comparative validation of the D. melanogaster modENCODE transcriptome annotation
    • Zhen-Xia Chen,
    • David Sturgill,
    • Jiaxin Qu,
    • Huaiyang Jiang,
    • Soo Park,
    • Nathan Boley,
    • Ana Maria Suzuki,
    • Anthony R. Fletcher,
    • David C. Plachetzki,
    • Peter C. FitzGerald,
    • Carlo G. Artieri,
    • Joel Atallah,
    • Olga Barmina,
    • James B. Brown,
    • Kerstin P. Blankenburg,
    • Emily Clough,
    • Abhijit Dasgupta,
    • Sai Gubbala,
    • Yi Han,
    • Joy C. Jayaseelan,
    • Divya Kalra,
    • Yoo-Ah Kim,
    • Christie L. Kovar,
    • Sandra L. Lee,
    • Mingmei Li,
    • James D. Malley,
    • John H. Malone,
    • Tittu Mathew,
    • Nicolas R. Mattiuzzo,
    • Mala Munidasa,
    • Donna M. Muzny,
    • Fiona Ongeri,
    • Lora Perales,
    • Teresa M. Przytycka,
    • Ling-Ling Pu,
    • Garrett Robinson,
    • Rebecca L. Thornton,
    • Nehad Saada,
    • Steven E. Scherer,
    • Harold E. Smith,
    • Charles Vinson,
    • Crystal B. Warner,
    • Kim C. Worley,
    • Yuan-Qing Wu,
    • Xiaoyan Zou,
    • Peter Cherbas,
    • Manolis Kellis,
    • Michael B. Eisen,
    • Fabio Piano,
    • Karin Kionte,
    • David H. Fitch,
    • Paul W. Sternberg,
    • Asher D. Cutter,
    • Michael O. Duff,
    • Roger A. Hoskins,
    • Brenton R. Graveley,
    • Richard A. Gibbs,
    • Peter J. Bickel,
    • Artyom Kopp,
    • Piero Carninci,
    • Susan E. Celniker,
    • Brian Oliver,
    • and Stephen Richards
    Genome Res. July 2014 24: 1209-1223; Published in Advance July 1, 2014, doi:10.1101/gr.159384.113
    OPEN ACCESS ARTICLE
  5. Research: Tempo and mode of regulatory evolution in Drosophila
    • Joseph D. Coolon,
    • C. Joel McManus,
    • Kraig R. Stevenson,
    • Brenton R. Graveley,
    • and Patricia J. Wittkopp
    Genome Res. May 2014 24: 797-808; Published in Advance February 24, 2014, doi:10.1101/gr.163014.113
    OPEN ACCESS ARTICLE
  6. Research: Evolution of splicing regulatory networks in Drosophila
    • C. Joel McManus,
    • Joseph D. Coolon,
    • Jodi Eipper-Mains,
    • Patricia J. Wittkopp,
    • and Brenton R. Graveley
    Genome Res. May 2014 24: 786-796; Published in Advance February 10, 2014, doi:10.1101/gr.161521.113
  7. Research: Genome-wide analysis of promoter architecture in Drosophila melanogaster
    • Roger A. Hoskins,
    • Jane M. Landolin,
    • James B. Brown,
    • Jeremy E. Sandler,
    • Hazuki Takahashi,
    • Timo Lassmann,
    • Charles Yu,
    • Benjamin W. Booth,
    • Dayu Zhang,
    • Kenneth H. Wan,
    • Li Yang,
    • Nathan Boley,
    • Justen Andrews,
    • Thomas C. Kaufman,
    • Brenton R. Graveley,
    • Peter J. Bickel,
    • Piero Carninci,
    • Joseph W. Carlson,
    • and Susan E. Celniker
    Genome Res. February 2011 21: 182-192; Published in Advance December 22, 2010, doi:10.1101/gr.112466.110
    OPEN ACCESS ARTICLE
  8. Research: Conservation of an RNA regulatory map between Drosophila and mammals
    • Angela N. Brooks,
    • Li Yang,
    • Michael O. Duff,
    • Kasper D. Hansen,
    • Jung W. Park,
    • Sandrine Dudoit,
    • Steven E. Brenner,
    • and Brenton R. Graveley
    Genome Res. February 2011 21: 193-202; Published in Advance October 4, 2010, doi:10.1101/gr.108662.110
    OPEN ACCESS ARTICLE
  9. Resource: The transcriptional diversity of 25 Drosophila cell lines
    • Lucy Cherbas,
    • Aarron Willingham,
    • Dayu Zhang,
    • Li Yang,
    • Yi Zou,
    • Brian D. Eads,
    • Joseph W. Carlson,
    • Jane M. Landolin,
    • Philipp Kapranov,
    • Jacqueline Dumais,
    • Anastasia Samsonova,
    • Jeong-Hyeon Choi,
    • Johnny Roberts,
    • Carrie A. Davis,
    • Haixu Tang,
    • Marijke J. van Baren,
    • Srinka Ghosh,
    • Alexander Dobin,
    • Kim Bell,
    • Wei Lin,
    • Laura Langton,
    • Michael O. Duff,
    • Aaron E. Tenney,
    • Chris Zaleski,
    • Michael R. Brent,
    • Roger A. Hoskins,
    • Thomas C. Kaufman,
    • Justen Andrews,
    • Brenton R. Graveley,
    • Norbert Perrimon,
    • Susan E. Celniker,
    • Thomas R. Gingeras,
    • and Peter Cherbas
    Genome Res. February 2011 21: 301-314; Published in Advance December 22, 2010, doi:10.1101/gr.112961.110
    OPEN ACCESS ARTICLE
  10. Research: Regulatory divergence in Drosophila revealed by mRNA-seq
    • C. Joel McManus,
    • Joseph D. Coolon,
    • Michael O. Duff,
    • Jodi Eipper-Mains,
    • Brenton R. Graveley,
    • and Patricia J. Wittkopp
    Genome Res. June 2010 20: 816-825; Published in Advance March 30, 2010, doi:10.1101/gr.102491.109
    OPEN ACCESS ARTICLE
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