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Berthold Göttgens
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8
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:
Interspecies regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes
Guanjue Xiang
,
Xi He
,
Belinda M. Giardine
,
Kathryn J. Isaac
,
Dylan J. Taylor
,
Rajiv C. McCoy
,
Camden Jansen
,
Cheryl A. Keller
,
Alexander Q. Wixom
,
April Cockburn
,
Amber Miller
,
Qian Qi
,
Yanghua He
,
Yichao Li
,
Jens Lichtenberg
,
Elisabeth F. Heuston
,
Stacie M. Anderson
,
Jing Luan
,
Marit W. Vermunt
,
Feng Yue
,
Michael E.G. Sauria
,
Michael C. Schatz
,
James Taylor
,
Berthold Göttgens
,
Jim R. Hughes
,
Douglas R. Higgs
,
Mitchell J. Weiss
,
Yong Cheng
,
Gerd A. Blobel
,
David M. Bodine
,
Yu Zhang
,
Qunhua Li
,
Shaun Mahony
,
and
Ross C. Hardison
Genome Res.
July 2024
34
:
1089
-
1105
;
Published in Advance
July 1, 2024
,
doi:
10.1101/gr.277950.123
Abstract
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:
An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis
Guanjue Xiang
,
Cheryl A. Keller
,
Elisabeth Heuston
,
Belinda M. Giardine
,
Lin An
,
Alexander Q. Wixom
,
Amber Miller
,
April Cockburn
,
Michael E.G. Sauria
,
Kathryn Weaver
,
Jens Lichtenberg
,
Berthold Göttgens
,
Qunhua Li
,
David Bodine
,
Shaun Mahony
,
James Taylor
,
Gerd A. Blobel
,
Mitchell J. Weiss
,
Yong Cheng
,
Feng Yue
,
Jim Hughes
,
Douglas R. Higgs
,
Yu Zhang
,
and
Ross C. Hardison
Genome Res.
March 2020
30
:
472
-
484
;
Published in Advance
March 4, 2020
,
doi:
10.1101/gr.255760.119
Abstract
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Research
:
Assessing the reliability of spike-in normalization for analyses of single-cell RNA sequencing data
Aaron T.L. Lun
,
Fernando J. Calero-Nieto
,
Liora Haim-Vilmovsky
,
Berthold Göttgens
,
and
John C. Marioni
Genome Res.
November 2017
27
:
1795
-
1806
;
Published in Advance
October 13, 2017
,
doi:
10.1101/gr.222877.117
Abstract
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LETTER
:
A novel mode of enhancer evolution: The
Tal1
stem cell enhancer recruited a MIR element to specifically boost its activity
Aileen M. Smith
,
Maria-Jose Sanchez
,
George A. Follows
,
Sarah Kinston
,
Ian J. Donaldson
,
Anthony R. Green
,
and
Berthold Göttgens
Genome Res.
September 2008
18
:
1422
-
1432
;
Published in Advance
August 7, 2008
,
doi:
10.1101/gr.077008.108
Abstract
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Methods
:
Identifying gene regulatory elements by genomic microarray mapping of DNaseI hypersensitive sites
George A. Follows
,
Pawan Dhami
,
Berthold Göttgens
,
Alexander W. Bruce
,
Peter J. Campbell
,
Shane C. Dillon
,
Aileen M. Smith
,
Christoph Koch
,
Ian J. Donaldson
,
Mike A. Scott
,
Ian Dunham
,
Mary E. Janes
,
David Vetrie
,
and
Anthony R. Green
Genome Res.
October 2006
16
:
1310
-
1319
;
Published in Advance
September 8, 2006
,
doi:
10.1101/gr.5373606
Abstract
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RESOURCE
:
Analysis of Multiple Genomic Sequence Alignments: A Web Resource, Online Tools, and Lessons Learned From Analysis of Mammalian SCL Loci
Michael A. Chapman
,
Ian J. Donaldson
,
James Gilbert
,
Darren Grafham
,
Jane Rogers
,
Anthony R. Green
,
and
Berthold Göttgens
Genome Res.
February 2004
14
:
313
-
318
;
Published in Advance
January 12, 2004
,
doi:
10.1101/gr.1759004
Abstract
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LETTER
:
Transcriptional Regulation of the Stem Cell Leukemia Gene (
SCL
) — Comparative Analysis of Five Vertebrate SCL Loci
Berthold Göttgens
,
Linda M. Barton
,
Michael A. Chapman
,
Angus M. Sinclair
,
Bjarne Knudsen
,
Darren Grafham
,
James G.R. Gilbert
,
Jane Rogers
,
David R. Bentley
,
and
Anthony R. Green
Genome Res.
May 1, 2002
12
:
749
-
759
;
doi:
10.1101/gr.45502
Abstract
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LETTER
:
Long-Range Comparison of Human and Mouse
SCL
Loci: Localized Regions of Sensitivity to Restriction Endonucleases Correspond Precisely with Peaks of Conserved Noncoding Sequences
Berthold Göttgens
,
James G.R. Gilbert
,
Linda M. Barton
,
Darren Grafham
,
Jane Rogers
,
David R. Bentley
,
and
Anthony R. Green
Genome Res.
January 1, 2001
11
:
87
-
97
;
doi:
10.1101/gr.153001
Abstract
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