Searching journal content for Barbara E. Engelhardt in author.

Displaying results 1-6 of 6
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  1. Method: netNMF-sc: leveraging gene–gene interactions for imputation and dimensionality reduction in single-cell expression analysis
    • Rebecca Elyanow,
    • Bianca Dumitrascu,
    • Barbara E. Engelhardt,
    • and Benjamin J. Raphael
    Genome Res. February 2020 30: 195-204; Published in Advance January 28, 2020, doi:10.1101/gr.251603.119
  2. Research: Glucocorticoid receptor recruits to enhancers and drives activation by motif-directed binding
    • Ian C. McDowell,
    • Alejandro Barrera,
    • Anthony M. D'Ippolito,
    • Christopher M. Vockley,
    • Linda K. Hong,
    • Sarah M. Leichter,
    • Luke C. Bartelt,
    • William H. Majoros,
    • Lingyun Song,
    • Alexias Safi,
    • D. Dewran Koçak,
    • Charles A. Gersbach,
    • Alexander J. Hartemink,
    • Gregory E. Crawford,
    • Barbara E. Engelhardt,
    • and Timothy E. Reddy
    Genome Res. September 2018 28: 1272-1284; Published in Advance August 10, 2018, doi:10.1101/gr.233346.117
    OPEN ACCESS ARTICLE
  3. Method: Co-expression networks reveal the tissue-specific regulation of transcription and splicing
    • Ashis Saha,
    • Yungil Kim,
    • Ariel D.H. Gewirtz,
    • Brian Jo,
    • Chuan Gao,
    • Ian C. McDowell,
    • The GTEx Consortium,
    • Barbara E. Engelhardt,
    • and Alexis Battle
    Genome Res. November 2017 27: 1843-1858; Published in Advance October 11, 2017, doi:10.1101/gr.216721.116
    OPEN ACCESS ARTICLE
  4. Method: Identifying cis-mediators for trans-eQTLs across many human tissues using genomic mediation analysis
    • Fan Yang,
    • Jiebiao Wang,
    • The GTEx Consortium,
    • Brandon L. Pierce,
    • and Lin S. Chen
    Genome Res. November 2017 27: 1859-1871; Published in Advance October 11, 2017, doi:10.1101/gr.216754.116
  5. Method: Detecting differential growth of microbial populations with Gaussian process regression
    • Peter D. Tonner,
    • Cynthia L. Darnell,
    • Barbara E. Engelhardt,
    • and Amy K. Schmid
    Genome Res. February 2017 27: 320-333; Published in Advance November 18, 2016, doi:10.1101/gr.210286.116
    OPEN ACCESS ARTICLE
  6. Resource: Genome-scale phylogenetic function annotation of large and diverse protein families
    • Barbara E. Engelhardt,
    • Michael I. Jordan,
    • John R. Srouji,
    • and Steven E. Brenner
    Genome Res. November 2011 21: 1969-1980; Published in Advance July 22, 2011, doi:10.1101/gr.104687.109
    OPEN ACCESS ARTICLE
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