Searching journal content for Barak A. Cohen in author.

Displaying results 1-10 of 11
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  1. Research: Mutational scanning of CRX classifies clinical variants and reveals biochemical properties of the transcriptional effector domain
    • James L. Shepherdson,
    • David M. Granas,
    • Jie Li,
    • Zara Shariff,
    • Stephen P. Plassmeyer,
    • Alex S. Holehouse,
    • Michael A. White,
    • and Barak A. Cohen
    Genome Res. October 2024 34: 1540-1552; Published in Advance September 25, 2024, doi:10.1101/gr.279415.124
    OPEN ACCESS ARTICLE
  2. Research: Pathogenic variants in CRX have distinct cis-regulatory effects on enhancers and silencers in photoreceptors
    • James L. Shepherdson,
    • Ryan Z. Friedman,
    • Yiqiao Zheng,
    • Chi Sun,
    • Inez Y. Oh,
    • David M. Granas,
    • Barak A. Cohen,
    • Shiming Chen,
    • and Michael A. White
    Genome Res. February 2024 34: 243-255; Published in Advance February 14, 2024, doi:10.1101/gr.278133.123
    OPEN ACCESS ARTICLE
  3. Research: Functional characterization of enhancer activity during a long terminal repeat's evolution
    • Alan Y. Du,
    • Xiaoyu Zhuo,
    • Vasavi Sundaram,
    • Nicholas O. Jensen,
    • Hemangi G. Chaudhari,
    • Nancy L. Saccone,
    • Barak A. Cohen,
    • and Ting Wang
    Genome Res. October 2022 32: 1840-1851; Published in Advance October 3, 2022, doi:10.1101/gr.276863.122
    OPEN ACCESS ARTICLE
  4. Research: Genomic environments scale the activities of diverse core promoters
    • Clarice K.Y. Hong and
    • Barak A. Cohen
    Genome Res. January 2022 32: 85-96; Published in Advance December 27, 2021, doi:10.1101/gr.276025.121
  5. Research: Local sequence features that influence AP-1 cis-regulatory activity
    • Hemangi G. Chaudhari and
    • Barak A. Cohen
    Genome Res. February 2018 28: 171-181; Published in Advance January 5, 2018, doi:10.1101/gr.226530.117
  6. Research: Interactions between pluripotency factors specify cis-regulation in embryonic stem cells
    • Chris Fiore and
    • Barak A. Cohen
    Genome Res. June 2016 26: 778-786; Published in Advance April 15, 2016, doi:10.1101/gr.200733.115
  7. Research: Promoter-distal RNA polymerase II binding discriminates active from inactive CCAAT/ enhancer-binding protein beta binding sites
    • Daniel Savic,
    • Brian S. Roberts,
    • Julia B. Carleton,
    • E. Christopher Partridge,
    • Michael A. White,
    • Barak A. Cohen,
    • Gregory M. Cooper,
    • Jason Gertz,
    • and Richard M. Myers
    Genome Res. December 2015 25: 1791-1800; Published in Advance October 20, 2015, doi:10.1101/gr.191593.115
  8. Research: High-throughput functional testing of ENCODE segmentation predictions
    • Jamie C. Kwasnieski,
    • Christopher Fiore,
    • Hemangi G. Chaudhari,
    • and Barak A. Cohen
    Genome Res. October 2014 24: 1595-1602; Published in Advance July 17, 2014, doi:10.1101/gr.173518.114
  9. Method: Massively parallel synthetic promoter assays reveal the in vivo effects of binding site variants
    • Ilaria Mogno,
    • Jamie C. Kwasnieski,
    • and Barak A. Cohen
    Genome Res. November 2013 23: 1908-1915; Published in Advance August 6, 2013, doi:10.1101/gr.157891.113
  10. Research: TATA is a modular component of synthetic promoters
    • Ilaria Mogno,
    • Francesco Vallania,
    • Robi D. Mitra,
    • and Barak A. Cohen
    Genome Res. October 2010 20: 1391-1397; Published in Advance July 13, 2010, doi:10.1101/gr.106732.110
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