Searching journal content for Atsushi Toyoda in author.

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  1. Method: Early embryonic mutations reveal dynamics of somatic and germ cell lineages in mice
    • Arikuni Uchimura,
    • Hirotaka Matsumoto,
    • Yasunari Satoh,
    • Yohei Minakuchi,
    • Sayaka Wakayama,
    • Teruhiko Wakayama,
    • Mayumi Higuchi,
    • Masakazu Hashimoto,
    • Ryutaro Fukumura,
    • Atsushi Toyoda,
    • Yoichi Gondo,
    • and Takeshi Yagi
    Genome Res. May 2022 32: 945-955; Published in Advance May 9, 2022, doi:10.1101/gr.276363.121
    OPEN ACCESS ARTICLE
  2. Research: Shared evolutionary trajectories of three independent neo-sex chromosomes in Drosophila
    • Masafumi Nozawa,
    • Yohei Minakuchi,
    • Kazuhiro Satomura,
    • Shu Kondo,
    • Atsushi Toyoda,
    • and Koichiro Tamura
    Genome Res. November 2021 31: 2069-2079; Published in Advance October 21, 2021, doi:10.1101/gr.275503.121
    OPEN ACCESS ARTICLE
  3. Research: Germline mutation rates and the long-term phenotypic effects of mutation accumulation in wild-type laboratory mice and mutator mice
    • Arikuni Uchimura,
    • Mayumi Higuchi,
    • Yohei Minakuchi,
    • Mizuki Ohno,
    • Atsushi Toyoda,
    • Asao Fujiyama,
    • Ikuo Miura,
    • Shigeharu Wakana,
    • Jo Nishino,
    • and Takeshi Yagi
    Genome Res. August 2015 25: 1125-1134; Published in Advance June 30, 2015, doi:10.1101/gr.186148.114
  4. Resource: Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads
    • Rei Kajitani,
    • Kouta Toshimoto,
    • Hideki Noguchi,
    • Atsushi Toyoda,
    • Yoshitoshi Ogura,
    • Miki Okuno,
    • Mitsuru Yabana,
    • Masayuki Harada,
    • Eiji Nagayasu,
    • Haruhiko Maruyama,
    • Yuji Kohara,
    • Asao Fujiyama,
    • Tetsuya Hayashi,
    • and Takehiko Itoh
    Genome Res. August 2014 24: 1384-1395; Published in Advance April 22, 2014, doi:10.1101/gr.170720.113
    OPEN ACCESS ARTICLE
  5. Resource: A biochemical landscape of A-to-I RNA editing in the human brain transcriptome
    • Masayuki Sakurai,
    • Hiroki Ueda,
    • Takanori Yano,
    • Shunpei Okada,
    • Hideki Terajima,
    • Toutai Mitsuyama,
    • Atsushi Toyoda,
    • Asao Fujiyama,
    • Hitomi Kawabata,
    • and Tsutomu Suzuki
    Genome Res. March 2014 24: 522-534; Published in Advance January 9, 2014, doi:10.1101/gr.162537.113
  6. Resource: Coelacanth genomes reveal signatures for evolutionary transition from water to land
    • Masato Nikaido,
    • Hideki Noguchi,
    • Hidenori Nishihara,
    • Atsushi Toyoda,
    • Yutaka Suzuki,
    • Rei Kajitani,
    • Hikoyu Suzuki,
    • Miki Okuno,
    • Mitsuto Aibara,
    • Benjamin P. Ngatunga,
    • Semvua I. Mzighani,
    • Hassan W.J. Kalombo,
    • Kawilarang W.A. Masengi,
    • Josef Tuda,
    • Sadao Nogami,
    • Ryuichiro Maeda,
    • Masamitsu Iwata,
    • Yoshitaka Abe,
    • Koji Fujimura,
    • Masataka Okabe,
    • Takanori Amano,
    • Akiteru Maeno,
    • Toshihiko Shiroishi,
    • Takehiko Itoh,
    • Sumio Sugano,
    • Yuji Kohara,
    • Asao Fujiyama,
    • and Norihiro Okada
    Genome Res. October 2013 23: 1740-1748; Published in Advance July 22, 2013, doi:10.1101/gr.158105.113
    OPEN ACCESS ARTICLE
  7. Resource: The ancestor of extant Japanese fancy mice contributed to the mosaic genomes of classical inbred strains
    • Toyoyuki Takada,
    • Toshinobu Ebata,
    • Hideki Noguchi,
    • Thomas M. Keane,
    • David J. Adams,
    • Takanori Narita,
    • Tadasu Shin-I,
    • Hironori Fujisawa,
    • Atsushi Toyoda,
    • Kuniya Abe,
    • Yuichi Obata,
    • Yoshiyuki Sakaki,
    • Kazuo Moriwaki,
    • Asao Fujiyama,
    • Yuji Kohara,
    • and Toshihiko Shiroishi
    Genome Res. August 2013 23: 1329-1338; Published in Advance April 19, 2013, doi:10.1101/gr.156497.113
    OPEN ACCESS ARTICLE
  8. Research: Targeted gene silencing in mouse germ cells by insertion of a homologous DNA into a piRNA generating locus
    • Yasuhiro Yamamoto,
    • Toshiaki Watanabe,
    • Yuko Hoki,
    • Kenjiro Shirane,
    • Yufeng Li,
    • Kenji Ichiiyanagi,
    • Satomi Kuramochi-Miyagawa,
    • Atsushi Toyoda,
    • Asao Fujiyama,
    • Masayuki Oginuma,
    • Hitomi Suzuki,
    • Takashi Sado,
    • Toru Nakano,
    • and Hiroyuki Sasaki
    Genome Res. February 2013 23: 292-299; Published in Advance November 6, 2012, doi:10.1101/gr.137224.112
  9. Research: Evolutionary history of novel genes on the tammar wallaby Y chromosome: Implications for sex chromosome evolution
    • Veronica J. Murtagh,
    • Denis O'Meally,
    • Natasha Sankovic,
    • Margaret L. Delbridge,
    • Yoko Kuroki,
    • Jeffrey L. Boore,
    • Atsushi Toyoda,
    • Kristen S. Jordan,
    • Andrew J. Pask,
    • Marilyn B. Renfree,
    • Asao Fujiyama,
    • Jennifer A. Marshall Graves,
    • and Paul D. Waters
    Genome Res. March 2012 22: 498-507; Published in Advance November 29, 2011, doi:10.1101/gr.120790.111
    OPEN ACCESS ARTICLE
  10. Research: Chickens possess centromeres with both extended tandem repeats and short non-tandem-repetitive sequences
    • Wei-Hao Shang,
    • Tetsuya Hori,
    • Atsushi Toyoda,
    • Jun Kato,
    • Kris Popendorf,
    • Yasubumi Sakakibara,
    • Asao Fujiyama,
    • and Tatsuo Fukagawa
    Genome Res. September 2010 20: 1219-1228; Published in Advance June 9, 2010, doi:10.1101/gr.106245.110
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