Searching journal content for Arul M. Chinnaiyan in author.

Displaying results 1-9 of 9
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  1. Method: Rapid molecular assays to study human centromere genomics
    • Rafael Contreras-Galindo,
    • Sabrina Fischer,
    • Anjan K. Saha,
    • John D. Lundy,
    • Patrick W. Cervantes,
    • Mohamad Mourad,
    • Claire Wang,
    • Brian Qian,
    • Manhong Dai,
    • Fan Meng,
    • Arul Chinnaiyan,
    • Gilbert S. Omenn,
    • Mark H. Kaplan,
    • and David M. Markovitz
    Genome Res. December 2017 27: 2040-2049; Published in Advance November 15, 2017, doi:10.1101/gr.219709.116
  2. Method: The use of exome capture RNA-seq for highly degraded RNA with application to clinical cancer sequencing
    • Marcin Cieslik,
    • Rashmi Chugh,
    • Yi-Mi Wu,
    • Ming Wu,
    • Christine Brennan,
    • Robert Lonigro,
    • Fengyun Su,
    • Rui Wang,
    • Javed Siddiqui,
    • Rohit Mehra,
    • Xuhong Cao,
    • David Lucas,
    • Arul M. Chinnaiyan,
    • and Dan Robinson
    Genome Res. September 2015 25: 1372-1381; Published in Advance August 7, 2015, doi:10.1101/gr.189621.115
  3. Resource: The landscape of antisense gene expression in human cancers
    • O. Alejandro Balbin,
    • Rohit Malik,
    • Saravana M. Dhanasekaran,
    • John R. Prensner,
    • Xuhong Cao,
    • Yi-Mi Wu,
    • Dan Robinson,
    • Rui Wang,
    • Guoan Chen,
    • David G. Beer,
    • Alexey I. Nesvizhskii,
    • and Arul M. Chinnaiyan
    Genome Res. July 2015 25: 1068-1079; Published in Advance June 10, 2015, doi:10.1101/gr.180596.114
  4. Research: HIV infection reveals widespread expansion of novel centromeric human endogenous retroviruses
    • Rafael Contreras-Galindo,
    • Mark H. Kaplan,
    • Shirley He,
    • Angie C. Contreras-Galindo,
    • Marta J. Gonzalez-Hernandez,
    • Ferdinand Kappes,
    • Derek Dube,
    • Susana M. Chan,
    • Dan Robinson,
    • Fan Meng,
    • Manhong Dai,
    • Scott D. Gitlin,
    • Arul M. Chinnaiyan,
    • Gilbert S. Omenn,
    • and David M. Markovitz
    Genome Res. September 2013 23: 1505-1513; Published in Advance May 8, 2013, doi:10.1101/gr.144303.112
    OPEN ACCESS ARTICLE
  5. Research: Deep sequencing reveals distinct patterns of DNA methylation in prostate cancer
    • Jung H. Kim,
    • Saravana M. Dhanasekaran,
    • John R. Prensner,
    • Xuhong Cao,
    • Daniel Robinson,
    • Shanker Kalyana-Sundaram,
    • Christina Huang,
    • Sunita Shankar,
    • Xiaojun Jing,
    • Matthew Iyer,
    • Ming Hu,
    • Lee Sam,
    • Catherine Grasso,
    • Christopher A. Maher,
    • Nallasivam Palanisamy,
    • Rohit Mehra,
    • Hal D. Kominsky,
    • Javed Siddiqui,
    • Jindan Yu,
    • Zhaohui S. Qin,
    • and Arul M. Chinnaiyan
    Genome Res. July 2011 21: 1028-1041; doi:10.1101/gr.119347.110
  6. Research: Copy number and targeted mutational analysis reveals novel somatic events in metastatic prostate tumors
    • Christiane M. Robbins,
    • Waibov A. Tembe,
    • Angela Baker,
    • Shripad Sinari,
    • Tracy Y. Moses,
    • Stephen Beckstrom-Sternberg,
    • James Beckstrom-Sternberg,
    • Michael Barrett,
    • James Long,
    • Arul Chinnaiyan,
    • James Lowey,
    • Edward Suh,
    • John V. Pearson,
    • David W. Craig,
    • David B. Agus,
    • Kenneth J. Pienta,
    • and John D. Carpten
    Genome Res. January 2011 21: 47-55; Published in Advance December 8, 2010, doi:10.1101/gr.107961.110
  7. Research: Discovery of non-ETS gene fusions in human prostate cancer using next-generation RNA sequencing
    • Dorothee Pflueger,
    • Stéphane Terry,
    • Andrea Sboner,
    • Lukas Habegger,
    • Raquel Esgueva,
    • Pei-Chun Lin,
    • Maria A. Svensson,
    • Naoki Kitabayashi,
    • Benjamin J. Moss,
    • Theresa Y. MacDonald,
    • Xuhong Cao,
    • Terrence Barrette,
    • Ashutosh K. Tewari,
    • Mark S. Chee,
    • Arul M. Chinnaiyan,
    • David S. Rickman,
    • Francesca Demichelis,
    • Mark B. Gerstein,
    • and Mark A. Rubin
    Genome Res. January 2011 21: 56-67; Published in Advance October 29, 2010, doi:10.1101/gr.110684.110
  8. Letter: New class of microRNA targets containing simultaneous 5′-UTR and 3′-UTR interaction sites
    • Inhan Lee,
    • Subramanian S. Ajay,
    • Jong In Yook,
    • Hyun Sil Kim,
    • Su Hyung Hong,
    • Nam Hee Kim,
    • Saravana M. Dhanasekaran,
    • Arul M. Chinnaiyan,
    • and Brian D. Athey
    Genome Res. July 2009 19: 1175-1183; Published in Advance March 31, 2009, doi:10.1101/gr.089367.108
    OPEN ACCESS ARTICLE
  9. RESOURCE: Development of Human Protein Reference Database as an Initial Platform for Approaching Systems Biology in Humans
    • Suraj Peri,
    • J. Daniel Navarro,
    • Ramars Amanchy,
    • Troels Z. Kristiansen,
    • Chandra Kiran Jonnalagadda,
    • Vineeth Surendranath,
    • Vidya Niranjan,
    • Babylakshmi Muthusamy,
    • T.K.B. Gandhi,
    • Mads Gronborg,
    • Nieves Ibarrola,
    • Nandan Deshpande,
    • K. Shanker,
    • H.N. Shivashankar,
    • B.P. Rashmi,
    • M.A. Ramya,
    • Zhixing Zhao,
    • K.N. Chandrika,
    • N. Padma,
    • H.C. Harsha,
    • A.J. Yatish,
    • M.P. Kavitha,
    • Minal Menezes,
    • Dipanwita Roy Choudhury,
    • Shubha Suresh,
    • Neelanjana Ghosh,
    • R. Saravana,
    • Sreenath Chandran,
    • Subhalakshmi Krishna,
    • Mary Joy,
    • Sanjeev K. Anand,
    • V. Madavan,
    • Ansamma Joseph,
    • Guang W. Wong,
    • William P. Schiemann,
    • Stefan N. Constantinescu,
    • Lily Huang,
    • Roya Khosravi-Far,
    • Hanno Steen,
    • Muneesh Tewari,
    • Saghi Ghaffari,
    • Gerard C. Blobe,
    • Chi V. Dang,
    • Joe G.N. Garcia,
    • Jonathan Pevsner,
    • Ole N. Jensen,
    • Peter Roepstorff,
    • Krishna S. Deshpande,
    • Arul M. Chinnaiyan,
    • Ada Hamosh,
    • Aravinda Chakravarti,
    • and Akhilesh Pandey
    Genome Res. October 2003 13: 2363-2371; doi:10.1101/gr.1680803
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