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Alex Hastie
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Displaying results 1-4 of
4
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Method
:
OMKar automates genome karyotyping using optical maps to identify constitutional abnormalities
Siavash Raeisi Dehkordi
,
Zhaoyang Jia
,
Joey Estabrook
,
Jen Hauenstein
,
Neil Miller
,
Naz Güleray-Lafci
,
Jürgen Neesen
,
Alex Hastie
,
Alka Chaubey
,
Andy Wing Chun Pang
,
Paul Dremsek
,
and
Vineet Bafna
Genome Res.
December 2025
35
:
2671
-
2681
;
Published in Advance
November 14, 2025
,
doi:
10.1101/gr.280536.125
Abstract
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Research
:
Optical genome mapping enables accurate testing of large repeat expansions
Bart van der Sanden
,
Kornelia Neveling
,
Syukri Shukor
,
Michael D. Gallagher
,
Joyce Lee
,
Stephanie L. Burke
,
Maartje Pennings
,
Ronald van Beek
,
Michiel Oorsprong
,
Ellen Kater-Baats
,
Eveline Kamping
,
Alide A. Tieleman
,
Nicol C. Voermans
,
Ingrid E. Scheffer
,
Jozef Gecz
,
Mark A. Corbett
,
Lisenka E.L.M. Vissers
,
Andy Wing Chun Pang
,
Alex Hastie
,
Erik-Jan Kamsteeg
,
and
Alexander Hoischen
Genome Res.
April 2025
35
:
810
-
823
;
Published in Advance
March 20, 2025
,
doi:
10.1101/gr.279491.124
Abstract
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Research
:
Optical genome mapping identifies rare structural variants in neural tube defects
Nikhil S. Sahajpal
,
Jane Dean
,
Benjamin Hilton
,
Timothy Fee
,
Cindy Skinner
,
Alex Hastie
,
Barbara R. DuPont
,
Alka Chaubey
,
Michael J. Friez
,
and
Roger E. Stevenson
Genome Res.
April 2025
35
:
798
-
809
;
Published in Advance
March 19, 2025
,
doi:
10.1101/gr.279318.124
Abstract
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Method
:
Long-read single-molecule maps of the functional methylome
Hila Sharim
,
Assaf Grunwald
,
Tslil Gabrieli
,
Yael Michaeli
,
Sapir Margalit
,
Dmitry Torchinsky
,
Rani Arielly
,
Gil Nifker
,
Matyas Juhasz
,
Felix Gularek
,
Miguel Almalvez
,
Brandon Dufault
,
Sreetama Sen Chandra
,
Alexander Liu
,
Surajit Bhattacharya
,
Yi-Wen Chen
,
Eric Vilain
,
Kathryn R. Wagner
,
Jonathan Pevsner
,
Jeff Reifenberger
,
Ernest T. Lam
,
Alex R. Hastie
,
Han Cao
,
Hayk Barseghyan
,
Elmar Weinhold
,
and
Yuval Ebenstein
Genome Res.
April 2019
29
:
646
-
656
;
Published in Advance
March 7, 2019
,
doi:
10.1101/gr.240739.118
Abstract
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March 2026, 36 (3)
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Single-cell gene signature scoring
Chromosome engineering in 8p syndrome
Convergent evolution in arid rodents
Short tandem repeat genotyping using long reads
Spectral component approach for recent population structure
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