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Review: Population genetic inference from genomic sequence variation
- John E. Pool,
- Ines Hellmann,
- Jeffrey D. Jensen,
- and Rasmus Nielsen
Genome Res. March 2010 20: 291-300; Published in Advance January 12, 2010, doi:10.1101/gr.079509.108
...4: e1000083. doi: 10.1371/ journal.pgen.1000083. Braverman JM, Hudson RR, Kaplan NL, Langley CH, Stephan W. 1995. The hitchhiking effect on the site frequency spectrum of DNA polymorphisms. Genetics 140: 783796. Bryant D,WongW,Mockler T. 2009. QSRAa quality-value guided de novo short read ...
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Research: Somatic retrotransposition in the developing rhesus macaque brain
- Victor Billon,
- Francisco J. Sanchez-Luque,
- Jay Rasmussen,
- Gabriela O. Bodea,
- Daniel J. Gerhardt,
- Patricia Gerdes,
- Seth W. Cheetham,
- Stephanie N. Schauer,
- Prabha Ajjikuttira,
- Thomas J. Meyer,
- Cora E. Layman,
- Kimberly A. Nevonen,
- Natasha Jansz,
- Jose L. Garcia-Perez,
- Sandra R. Richardson,
- Adam D. Ewing,
- Lucia Carbone,
- and Geoffrey J. Faulkner
Genome Res. July 2022 32: 1298-1314; Published in Advance June 21, 2022, doi:10.1101/gr.276451.121
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Method: High-fidelity, large-scale targeted profiling of microsatellites
- Caitlin A. Loh,
- Danielle A. Shields,
- Adam Schwing,
- and Gilad D. Evrony
Genome Res. July 2024 34: 1008-1026; Published in Advance July 16, 2024, doi:10.1101/gr.278785.123
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Review: Leveraging the power of long reads for targeted sequencing
- Shruti V. Iyer,
- Sara Goodwin,
- and William Richard McCombie
Genome Res. November 2024 34: 1701-1718; doi:10.1101/gr.279168.124
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Research: Cell-type- and chromosome-specific chromatin landscapes and DNA replication programs of Drosophila testis tumor stem cell–like cells
- Jennifer A. Urban,
- Daniel Ringwalt,
- John M. Urban,
- Wingel Xue,
- Ryan Gleason,
- Keji Zhao,
- and Xin Chen
Genome Res. January 2026 36: 83-101; Published in Advance December 10, 2025, doi:10.1101/gr.280809.125
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Research: Transposable elements contribute to the evolution of host shift–related genes in cactophilic Drosophila species
- Daniel Siqueira de Oliveira,
- Anaïs Larue,
- William Vilas Boas Nunes,
- Francois Sabot,
- Alejandra Bodelón,
- María Pilar García Guerreiro,
- Cristina Vieira,
- and Claudia Marcia Aparecida Carareto
Genome Res. March 2026 36: 487-505; Published in Advance February 10, 2026, doi:10.1101/gr.280463.125
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ARTICLE: Copy number variation and evolution in humans and chimpanzees
- George H. Perry,
- Fengtang Yang,
- Tomas Marques-Bonet,
- Carly Murphy,
- Tomas Fitzgerald,
- Arthur S. Lee,
- Courtney Hyland,
- Anne C. Stone,
- Matthew E. Hurles,
- Chris Tyler-Smith,
- Evan E. Eichler,
- Nigel P. Carter,
- Charles Lee,
- and Richard Redon
Genome Res. November 2008 18: 1698-1710; Published in Advance September 4, 2008, doi:10.1101/gr.082016.108
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ARTICLE: Sensitivity, reproducibility, and accuracy in short tandem repeat genotyping using capillary array electrophoresis.
- E S Mansfield,
- M Vainer,
- S Enad,
- D L Barker,
- D Harris,
- E Rappaport,
- and P Fortina
Genome Res. September 1996 6: 893-903; doi:10.1101/gr.6.9.893
.... Electrophoresis 6 : 23 28 . Bashkin, J., , Roach, D. , Leong, J. , Barker, D. , Johnston. R. Bashkin, J., Roach, D. Leong, J. Barker, D. and Johnston. R. 1996b . Implementation of a capillary array electrophoresis instrument. J. Capil. Electrophoresis (in press). Butler, J.M. 1995. Sizing and quantitation ...
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LETTER: Anomalies in the Expression Profile of Interspecific Hybrids of Drosophila melanogaster and Drosophila simulans
- José M. Ranz,
- Kalsang Namgyal,
- Greg Gibson,
- and Daniel L. Hartl
Genome Res. March 2004 14: 373-379; Published in Advance February 12, 2004, doi:10.1101/gr.2019804
...-44-1223-333992. Received September 26, 2003. Revision received January 9, 2004. Cold Spring Harbor Laboratory Press Daniel L, Hartl Greg Hartl Daniel L. DanielL Hartl Greg, Gibson D Hartl Jos M, Ranz JM Ranz Ranz Hartl, Daniel L Hartl, DL Daniel L Hartl Jos M Ranz Jos M. Ranz, J.M D.L. Hartl DL ...
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LETTER: Genomic Gene Clustering Analysis of Pathways in Eukaryotes
- Jennifer M. Lee and
- Erik L.L. Sonnhammer
Genome Res. May 1, 2003 13: 875-882; Published in Advance April 14, 2003, doi:10.1101/gr.737703
.... Received August 28, 2002. Accepted January 28, 2003. Cold Spring Harbor Laboratory Press Sonnhammer, Erik LL E.L. Sonnhammer Lee Jennifer M. Lee, J.M Jennifer Lee LL Erik LL Sonnhammer J Lee E Sonnhammer JM Lee Lee, Jennifer M Sonnhammer Erik L.L. Jennifer M, Lee Sonnhammer, EL ...

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