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Research
:
Revisiting chromatin packaging in mouse sperm
Qiangzong Yin
,
Chih-Hsiang Yang
,
Olga S. Strelkova
,
Jingyi Wu
,
Yu Sun
,
Sneha Gopalan
,
Liyan Yang
,
Job Dekker
,
Thomas G. Fazzio
,
Xin Zhiguo Li
,
Johan Gibcus
,
and
Oliver J. Rando
Genome Res.
December 2023
33
:
2079
-
2093
;
Published in Advance
December 21, 2023
,
doi:
10.1101/gr.277845.123
Abstract
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Research
:
tRNA-derived small RNAs are embedded in the gene regulatory network instructing
Drosophila
metamorphosis
Junling Shi
,
Jiaqi Xu
,
Jun Ma
,
and
Feng He
Genome Res.
December 2023
33
:
2119
-
2132
;
Published in Advance
November 16, 2023
,
doi:
10.1101/gr.278128.123
Abstract
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Research
:
Transcriptional programs mediating neuronal toxicity and altered glial–neuronal signaling in a
Drosophila
knock-in tauopathy model
Hassan Bukhari
,
Vanitha Nithianandam
,
Rachel A. Battaglia
,
Anthony Cicalo
,
Souvarish Sarkar
,
Aram Comjean
,
Yanhui Hu
,
Matthew J. Leventhal
,
Xianjun Dong
,
and
Mel B. Feany
Genome Res.
April 2024
34
:
590
-
605
;
Published in Advance
April 10, 2024
,
doi:
10.1101/gr.278576.123
Abstract
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Research
:
Differences in activity and stability drive transposable element variation in tropical and temperate maize
Shujun Ou
,
Armin Scheben
,
Tyler Collins
,
Yinjie Qiu
,
Arun S. Seetharam
,
Claire C. Menard
,
Nancy Manchanda
,
Jonathan I. Gent
,
Michael C. Schatz
,
Sarah N. Anderson
,
Matthew B. Hufford
,
and
Candice N. Hirsch
Genome Res.
August 2024
34
:
1140
-
1153
;
Published in Advance
September 9, 2024
,
doi:
10.1101/gr.278131.123
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:
Comprehensive identification of genomic and environmental determinants of phenotypic plasticity in maize
Laura E. Tibbs-Cortes
,
Tingting Guo
,
Carson M. Andorf
,
Xianran Li
,
and
Jianming Yu
Genome Res.
August 2024
34
:
1253
-
1263
;
Published in Advance
September 13, 2024
,
doi:
10.1101/gr.279027.124
Abstract
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Resource
:
Global compositional and functional states of the human gut microbiome in health and disease
Sunjae Lee
,
Theo Portlock
,
Emmanuelle Le Chatelier
,
Fernando Garcia-Guevara
,
Frederick Clasen
,
Florian Plaza Oñate
,
Nicolas Pons
,
Neelu Begum
,
Azadeh Harzandi
,
Ceri Proffitt
,
Dorines Rosario
,
Stefania Vaga
,
Junseok Park
,
Kalle von Feilitzen
,
Fredric Johansson
,
Cheng Zhang
,
Lindsey A. Edwards
,
Vincent Lombard
,
Franck Gauthier
,
Claire J. Steves
,
David Gomez-Cabrero
,
Bernard Henrissat
,
Doheon Lee
,
Lars Engstrand
,
Debbie L. Shawcross
,
Gordon Proctor
,
Mathieu Almeida
,
Jens Nielsen
,
Adil Mardinoglu
,
David L. Moyes
,
Stanislav Dusko Ehrlich
,
Mathias Uhlen
,
and
Saeed Shoaie
Genome Res.
June 2024
34
:
967
-
978
;
Published in Advance
July 22, 2024
,
doi:
10.1101/gr.278637.123
Abstract
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Resource
:
Streamlined spatial and environmental expression signatures characterize the minimalist duckweed
Wolffia australiana
Tom Denyer
,
Pin-Jou Wu
,
Kelly Colt
,
Bradley W. Abramson
,
Zhili Pang
,
Pavel Solansky
,
Allen Mamerto
,
Tatsuya Nobori
,
Joseph R. Ecker
,
Eric Lam
,
Todd P. Michael
,
and
Marja C.P. Timmermans
Genome Res.
July 2024
34
:
1106
-
1120
;
Published in Advance
July 1, 2024
,
doi:
10.1101/gr.279091.124
Abstract
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Research
:
Evidence for compensatory evolution within pleiotropic regulatory elements
Zane Kliesmete
,
Peter Orchard
,
Victor Yan Kin Lee
,
Johanna Geuder
,
Simon M. Krauß
,
Mari Ohnuki
,
Jessica Jocher
,
Beate Vieth
,
Wolfgang Enard
,
and
Ines Hellmann
Genome Res.
October 2024
34
:
1528
-
1539
;
Published in Advance
September 10, 2024
,
doi:
10.1101/gr.279001.124
Abstract
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Method
:
Systematic identification of interchromosomal interaction networks supports the existence of specialized RNA factories
Borislav Hrisimirov Hristov
,
William Stafford Noble
,
and
Alessandro Bertero
Genome Res.
October 2024
34
:
1610
-
1623
;
Published in Advance
September 25, 2024
,
doi:
10.1101/gr.278327.123
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Research
:
De novo genome assemblies of two cryptodiran turtles with ZZ/ZW and XX/XY sex chromosomes provide insights into patterns of genome reshuffling and uncover novel 3D genome folding in amniotes
Basanta Bista
,
Laura González-Rodelas
,
Lucía Álvarez-González
,
Zhi-qiang Wu
,
Eugenia E. Montiel
,
Ling Sze Lee
,
Daleen B. Badenhorst
,
Srihari Radhakrishnan
,
Robert Literman
,
Beatriz Navarro-Dominguez
,
John B. Iverson
,
Simon Orozco-Arias
,
Josefa González
,
Aurora Ruiz-Herrera
,
and
Nicole Valenzuela
Genome Res.
October 2024
34
:
1553
-
1569
;
Published in Advance
October 16, 2024
,
doi:
10.1101/gr.279443.124
Abstract
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