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LETTER: Lateral gene transfer between obligate intracellular bacteria: Evidence from the Rickettsia massiliae genome
- Guillaume Blanc,
- Hiroyuki Ogata,
- Catherine Robert,
- Stéphane Audic,
- Jean-Michel Claverie,
- and Didier Raoult
Genome Res. November 2007 17: 1657-1664; Published in Advance October 4, 2007, doi:10.1101/gr.6742107
.... , Suhre, P.K. , Vestris, G. , Claverie, J.-M. , Raoult, D. ( 2007 ) Reductive evolution from the mother of Rickettsia . PLoS Genet. 3 : e14 , doi: 10.1371/journal.pgen.0030014 . Bordenstein, S.R. , Reznikoff, W.S. ( 2005 ) Mobile DNA in obligate intracellular bacteria . Nat. Rev. Microbiol. 3 : 688 ...
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LETTER: Unique genes in giant viruses: Regular substitution pattern and anomalously short size
- Hiroyuki Ogata and
- Jean-Michel Claverie
Genome Res. September 2007 17: 1353-1361; Published in Advance July 25, 2007, doi:10.1101/gr.6358607
...with the human . Nature 437 : 69 87 . Claverie, J.M. ( 2006 ) Viruses take center stage in cellular evolution . Genome Biol. 7 : 110 , doi: 10.1186/gb-2006-7-6-110 . Claverie, J.M. , Ogata, H. , Audic, S. , Abergel, C. , Suhre, K. , Fournier, P.E. ( 2006 ) Mimivirus and the emerging concept of giant virus ...
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Resource: High-resolution mapping of open chromatin in the rice genome
- Wenli Zhang,
- Yufeng Wu,
- James C. Schnable,
- Zixian Zeng,
- Michael Freeling,
- Gregory E. Crawford,
- and Jiming Jiang
Genome Res. January 2012 22: 151-162; Published in Advance November 22, 2011, doi:10.1101/gr.131342.111
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Research: MicroRNA, mRNA, and protein expression link development and aging in human and macaque brain
- Mehmet Somel,
- Song Guo,
- Ning Fu,
- Zheng Yan,
- Hai Yang Hu,
- Ying Xu,
- Yuan Yuan,
- Zhibin Ning,
- Yuhui Hu,
- Corinna Menzel,
- Hao Hu,
- Michael Lachmann,
- Rong Zeng,
- Wei Chen,
- and Philipp Khaitovich
Genome Res. September 2010 20: 1207-1218; Published in Advance July 20, 2010, doi:10.1101/gr.106849.110
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Method: Methylation profiling in individuals with uniparental disomy identifies novel differentially methylated regions on chromosome 15
- Andrew J. Sharp,
- Eugenia Migliavacca,
- Yann Dupre,
- Elisavet Stathaki,
- Mohammad Reza Sailani,
- Alessandra Baumer,
- Albert Schinzel,
- Deborah J. Mackay,
- David O. Robinson,
- Gilda Cobellis,
- Luigi Cobellis,
- Han G. Brunner,
- Bernhard Steiner,
- and Stylianos E. Antonarakis
Genome Res. September 2010 20: 1271-1278; Published in Advance July 14, 2010, doi:10.1101/gr.108597.110
..., Schwartz S, Nicholls RD, Horsthemke B. 1995. Inherited microdeletions in the Angelman and Prader-Willi syndromes define an imprinting centre on human chromosome 15.Nat Genet 9: 395400. Cheverud JM, Hager R, Roseman C, Fawcett G, Wang B, Wolf JB. 2008. Genomic imprinting effects on adult body composition ...
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Research: The effect of translocation-induced nuclear reorganization on gene expression
- Louise Harewood,
- Frédéric Schütz,
- Shelagh Boyle,
- Paul Perry,
- Mauro Delorenzi,
- Wendy A. Bickmore,
- and Alexandre Reymond
Genome Res. May 2010 20: 554-564; Published in Advance March 8, 2010, doi:10.1101/gr.103622.109
...Stat Soc Ser B Methodol 57: 289300. Boyle S, Gilchrist S, Bridger JM, Mahy NL, Ellis JA, Bickmore WA. 2001. The spatial organization of human chromosomes within the nuclei of normal and emerin-mutant cells. Hum Mol Genet 10: 211219. Brown JM, Green J, Pires das Neves R, Wallace HA, Smith AJ, Hughes J ...
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Perspective: Enabling functional genomics with genome engineering
- Isaac B. Hilton and
- Charles A. Gersbach
Genome Res. October 2015 25: 1442-1455; doi:10.1101/gr.190124.115
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LETTER: Serum response factor binding sites differ in three human cell types
- Sara J. Cooper,
- Nathan D. Trinklein,
- Loan Nguyen,
- and Richard M. Myers
Genome Res. February 2007 17: 136-144; Published in Advance January 2, 2007, doi:10.1101/gr.5875007
..., and integration of a wound-response gene expression signature in predicting breast cancer survival . Proc. Natl. Acad. Sci. 102 : 3738 3743 . Diehn, M. , Sherlock, G. , Binkley, G. , Jin, H. , Matese, J.C. , Hernandez-Boussard, T. , Rees, C.A. , Cherry, J.M. , Botstein, D. , Brown, P.O. , et al. ( 2003 ...
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Review: Contrasting genetic architectures in different mouse reference populations used for studying complex traits
- David A. Buchner and
- Joseph H. Nadeau
Genome Res. June 2015 25: 775-791; Published in Advance May 7, 2015, doi:10.1101/gr.187450.114
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Research: High-throughput sequencing of complete human mtDNA genomes from the Philippines
- Ellen D. Gunnarsdóttir,
- Mingkun Li,
- Marc Bauchet,
- Knut Finstermeier,
- and Mark Stoneking
Genome Res. January 2011 21: 1-11; Published in Advance December 8, 2010, doi:10.1101/gr.107615.110
...Pugach, and Janet Kelso for technical assistance and valuable discussion. This research was funded by the Max Planck Society. References AbdullaMA, Ahmed I, Assawamakin A, Bhak J, Brahmachari SK, Calacal GC, Chaurasia A, Chen CH, Chen JM, Chen YT, et al. 2009. Mapping human genetic diversity in Asia ...

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