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ARTICLES: Human chromosome-specific cDNA libraries: new tools for gene identification and genome annotation.
- R G Del Mastro,
- L Wang,
- A D Simmons,
- T D Gallardo,
- G A Clines,
- J A Ashley,
- C J Hilliard,
- J J Wasmuth,
- J D McPherson,
- and M Lovett
Genome Res. September 1995 5: 185-194; doi:10.1101/gr.5.2.185
...Harbor Laboratory Press References Adams, M.D., , Kelley, J.M. , Gocayne, J.D. , Dubnick, M. , Polymeropoulos, M.H. , Xiao; H. , Merril, C.R. , Wu, A. , Olde, B. , Moreno. R.F. Adams, M.D., Kelley, J.M. Gocayne, J.D. Dubnick, M. Polymeropoulos, M.H. Xiao; H. Merril, C.R. Wu, A. Olde, B. and Moreno. R ...
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Research: Personal and population genomics of human regulatory variation
- Benjamin Vernot,
- Andrew B. Stergachis,
- Matthew T. Maurano,
- Jeff Vierstra,
- Shane Neph,
- Robert E. Thurman,
- John A. Stamatoyannopoulos,
- and Joshua M. Akey
Genome Res. September 2012 22: 1689-1697; doi:10.1101/gr.134890.111
...Vernot Stergachis, Andrew B Joshua M, Akey Robert E, Thurman Matthew T, Maurano Akey, JM MatthewT Maurano Vierstra, Jeff Shane Stamatoyannopoulos, JA B Vernot Vernot, Benjamin Robert E Matthew T Maurano JA Stamatoyannopoulos Andrew B, Stergachis Akey, J J Akey RobertE Thurman Andrew Joshua M Vierstra ...
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Research: Genetic, epigenetic, and environmental mechanisms govern allele-specific gene expression
- Celine L. St. Pierre,
- Juan F. Macias-Velasco,
- Jessica P. Wayhart,
- Li Yin,
- Clay F. Semenkovich,
- and Heather A. Lawson
Genome Res. June 2022 32: 1042-1057; Published in Advance May 2, 2022, doi:10.1101/gr.276193.121
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Research: A low-abundance class of Dicer-dependent siRNAs produced from a variety of features in C. elegans
- Thiago L. Knittel,
- Brooke E. Montgomery,
- Alex J. Tate,
- Ennis W. Deihl,
- Anastasia S. Nawrocki,
- Frederic J. Hoerndli,
- and Taiowa A. Montgomery
Genome Res. December 2024 34: 2203-2216; Published in Advance December 2, 2024, doi:10.1101/gr.279083.124
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ARTICLE: 2006 expressed-sequence tags derived from human chromosome 7-enriched cDNA libraries.
- J W Touchman,
- G G Bouffard,
- L A Weintraub,
- J R Idol,
- L Wang,
- C M Robbins,
- J C Nussbaum,
- M Lovett,
- and E D Green
Genome Res. March 1997 7: 281-292; doi:10.1101/gr.7.3.281
.... Footnotes Copyright Cold Spring Harbor Laboratory Press References Adams, M.D., , Kelley, J.M. , Gocayne, J.D. , Dubnick, M. , Polymeropoulos, M.H. , Xiao, H. , Merril, C.R. , Wu, A. , Olde, B. , Moreno, R.F. , Kerlavage, A.R. , McCombie, W.R. , Venter. J.C. Adams, M.D., Kelley, J.M. Gocayne, J.D. Dubnick ...
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LETTER: Human Haplotype Block Sizes Are Negatively Correlated With Recombination Rates
- Tiffany A. Greenwood,
- Brinda K. Rana,
- and Nicholas J. Schork
Genome Res. July 2004 14: 1358-1361; doi:10.1101/gr.1540404
..., 2003. Cold Spring Harbor Laboratory Press References Akey, J.M., Zhang, K., Xiong, M., and Jin, L. 2003 . The effect of single nucleotide polymorphism identification strategies on estimates of linkage disequilibrium. Mol. Biol. Evol. 20 : 232 242. Cullen, M., Perfetto, S.P., Klitz, W., Nelson, G ...
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Resource: A reference data set of 5.4 million phased human variants validated by genetic inheritance from sequencing a three-generation 17-member pedigree
- Michael A. Eberle,
- Epameinondas Fritzilas,
- Peter Krusche,
- Morten Källberg,
- Benjamin L. Moore,
- Mitchell A. Bekritsky,
- Zamin Iqbal,
- Han-Yu Chuang,
- Sean J. Humphray,
- Aaron L. Halpern,
- Semyon Kruglyak,
- Elliott H. Margulies,
- Gil McVean,
- and David R. Bentley
Genome Res. January 2017 27: 157-164; Published in Advance November 30, 2016, doi:10.1101/gr.210500.116
..., et al. 2011. Variation in -wide mutation rates within and between human families. Nat Genet 43: 712714. Dausset J, Cann H, Cohen D, LathropM, Lalouel JM,White R. 1990. Centre dEtude du Polymorphisme Humain (CEPH): collaborative geneticmapping of the human . Genomics 6: 575577. DePristo MA, Banks E ...
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Method: Whole-genome bisulfite sequencing with improved accuracy and cost
- Masako Suzuki,
- Will Liao,
- Frank Wos,
- Andrew D. Johnston,
- Justin DeGrazia,
- Jennifer Ishii,
- Toby Bloom,
- Michael C. Zody,
- Soren Germer,
- and John M. Greally
Genome Res. September 2018 28: 1364-1371; Published in Advance August 9, 2018, doi:10.1101/gr.232587.117
...in nuclear waste, extreme resistance, and potential applications gleaned from the sequence of Kineococcus radiotolerans SRS30216. PLoS One 3: e3878. Bibikova M, Barnes B, Tsan C, Ho V, Klotzle B, Le JM, Delano D, Zhang L, Schroth GP, Gunderson KL, et al. 2011. High density DNA methylation array with single ...
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Research: Evolutionary patterns of metazoan microRNAs reveal targeting principles in the let-7 and miR-10 families
- Justin M. Wolter,
- Hoai Huang Thi Le,
- Alexander Linse,
- Victoria A. Godlove,
- Thuy-Duyen Nguyen,
- Kasuen Kotagama,
- Alissa Lynch,
- Alan Rawls,
- and Marco Mangone
Genome Res. January 2017 27: 53-63; Published in Advance December 7, 2016, doi:10.1101/gr.209361.116
...M, Kwon Y, Choi I, Chang H, Ryu D, Lee B, et al. 2013. MiRGator v3.0: a microRNA portal for deep sequencing, expression profiling and mRNA targeting. Nucleic Acids Res 41: D252D257. Crooks GE, Hon G, Chandonia JM, Brenner SE. 2004.WebLogo: a sequence logo generator. Genome Res 14: 1188 ...
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Method: Network properties derived from deep sequencing of human B-cell receptor repertoires delineate B-cell populations
- Rachael J.M. Bashford-Rogers,
- Anne L. Palser,
- Brian J. Huntly,
- Richard Rance,
- George S. Vassiliou,
- George A. Follows,
- and Paul Kellam
Genome Res. November 2013 23: 1874-1884; Published in Advance June 6, 2013, doi:10.1101/gr.154815.113
...Method Rachael J.M. Bashford-Rogers,1 Anne L. Palser,1 Brian J. Huntly,2 Richard Rance,1 George S. Vassiliou,1 George A. Follows,3 and Paul Kellam1,4,5 1Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, United Kingdom; 2CIMR, Addenbrookes Hospital, Hills ...
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