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  1. ...,whichwecall biedgedgraphs (Fig. 2D), givean equivalent representation. We call a bidirected graph in which each node is labeled with a nucleotide string a sequence graph (Novak et al. 2017; E Garrison, J Sirn, AM Novak, G Hickey, JM Eizenga, ET Dawson, W Jones, OJ Buske, MF Lin, B Paten, et al., in prep.). In a sequence ...
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  2. ...: an empirically improved memory-efficient shortread de novo assembler. Gigascience 1: 18. Maretty L, Jensen JM, Petersen B, Sibbesen JA, Liu S, Villesen P, Skov L, Belling K, Theil Have C, Izarzugaza JMG, et al. 2017. Sequencing and de novo assembly of 150 s from Denmark as a population reference. Nature doi: 10 ...
  3. ...of Biological Sciences at Carnegie Mellon University. Author contributions:C.J.M. conceived of the experiments and designed the study. C.J.M., G.E.M., and P.S. performed the experiments. C.J.M. and A.S. analyzed the data. C.J.M. wrote the manuscript with input from all authors. References Altman DG, Bland JM ...
  4. .... References The 1000 Genomes Project Consortium. 2010. A map of human variation from population-scale sequencing. Nature 467: 10611073. Alkan C, Kidd JM, Marques-Bonet T, Aksay G, Antonacci F, Hormozdiari F, Kitzman JO, Baker C, Malig M, Mutlu O, et al. 2009. Personalized copy number and segmental ...
  5. ... 2011 by Cold Spring Harbor Laboratory Press JM Kidd Malig Eichler, Evan E Mario Emily Turner Saba Sajjadian Emily H, Turner Baker Carl Richard RichardK Wilson Graves, Tina A R.K. Wilson Eichler Evan E. Marques-Bonet Archidiacono, N Shendure, J Eichler, E.E J.M. Kidd A Navarro T.A. Graves Arcadi ...
  6. ...the middle regions of genes. The mapped ESTs should prove useful as new gene-based markers for mapping and candidate gene hunting, particularly when anchored to a well-developed physical map of the human . Footnotes Copyright Cold Spring Harbor Laboratory Press References Adams, M.D., , Kelley, J.M ...
  7. ...culture. J Clin Microbiol 37: 3722 3724. Blanc G, NgwamidibaM, Ogata H, Fournier PE, Claverie JM, Raoult D. 2005. Molecular evolution of Rickettsia surface antigens: Evidence of positive selection. Mol Biol Evol 22: 20732083. Blanc G, Ogata H, Robert C, Audic S, Suhre K, Vestris G, Claverie JM, Raoult D ...
  8. .... Genomewide quantitative enhancer activity maps identified by STARR-seq. Science 339: 10741077. Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, et al. 2000. Gene ontology: tool for the unificationofbiology.TheGeneOntologyConsortium.NatGenet25 ...
  9. ...library of the immunoglobulin repertoire on phage lambda. Science 246 : 1275 1281 . 7.. Mullinax, R.L., , Gross, E.A. , Amberg, J.R. , Hay, B.N. , Hogrefe, H.H. , Kubitz, M.M. , Greener, A. , Alting-Mees, M. , Ardourel, D. , Short, J.M. , Sorge, J.A. , Shopes. B. Mullinax, R.L., Gross, E.A. Amberg, J ...
  10. .... Abstract Footnotes Copyright Cold Spring Harbor Laboratory Press du Breuil, R du R M du Breuil RM duBreuil Mendelow J M Mendelow, B Patel RM du Breuil du Breuil, R.M Patel, J B.V. Mendelow B V, Mendelow J Patel Patel, J.M Patel J M B Mendelow B V Mendelow Mendelow, B.V Patel, JM R du ...
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