Method:DNA copy number analysis of fresh and formalin-fixed specimens by shallow whole-genome sequencing with identification and
exclusion of problematic regions in the genome assembly
Ilari Scheinin,
Daoud Sie,
Henrik Bengtsson,
Mark A. van de Wiel,
Adam B. Olshen,
Hinke F. van Thuijl,
Hendrik F. van Essen,
Paul P. Eijk,
François Rustenburg,
Gerrit A. Meijer,
Jaap C. Reijneveld,
Pieter Wesseling,
Daniel Pinkel,
Donna G. Albertson,
and Bauke Ylstra
Genome Res. December 2014 24: 2022-2032; Published in Advance September 18, 2014, doi:10.1101/gr.175141.114