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Table of Contents
December 2020; 30 (12)
Research
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Complex mosaic structural variations in human fetal brains
Shobana Sekar
,
Livia Tomasini
,
Christos Proukakis
,
Taejeong Bae
,
Logan Manlove
,
Yeongjun Jang
,
Soraya Scuderi
,
Bo Zhou
,
Maria Kalyva
,
Anahita Amiri
,
Jessica Mariani
,
Fritz J. Sedlazeck
,
Alexander E. Urban
,
Flora M. Vaccarino
,
and
Alexej Abyzov
Genome Res.
December 2020
30
:
1695
-
1704
;
Published in Advance
October 29, 2020
,
doi:
10.1101/gr.262667.120
Abstract
Full Text
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Widespread intron retention impairs protein homeostasis in C9orf72 ALS brains
Qingqing Wang
,
Erin G. Conlon
,
James L. Manley
,
and
Donald C. Rio
Genome Res.
December 2020
30
:
1705
-
1715
;
Published in Advance
October 14, 2020
,
doi:
10.1101/gr.265298.120
Abstract
Full Text
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Sequence analysis in
Bos taurus
reveals pervasiveness of X–Y arms races in mammalian lineages
Jennifer F. Hughes
,
Helen Skaletsky
,
Tatyana Pyntikova
,
Natalia Koutseva
,
Terje Raudsepp
,
Laura G. Brown
,
Daniel W. Bellott
,
Ting-Jan Cho
,
Shannon Dugan-Rocha
,
Ziad Khan
,
Colin Kremitzki
,
Catrina Fronick
,
Tina A. Graves-Lindsay
,
Lucinda Fulton
,
Wesley C. Warren
,
Richard K. Wilson
,
Elaine Owens
,
James E. Womack
,
William J. Murphy
,
Donna M. Muzny
,
Kim C. Worley
,
Bhanu P. Chowdhary
,
Richard A. Gibbs
,
and
David C. Page
Genome Res.
December 2020
30
:
1716
-
1726
;
Published in Advance
November 18, 2020
,
doi:
10.1101/gr.269902.120
Abstract
Full Text
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Tissue-specific patterns of regulatory changes underlying gene expression differences among
Ficedula
flycatchers and their naturally occurring F
1
hybrids
Carina F. Mugal
,
Mi Wang
,
Niclas Backström
,
David Wheatcroft
,
Murielle Ålund
,
Marie Sémon
,
S. Eryn McFarlane
,
Ludovic Dutoit
,
Anna Qvarnström
,
and
Hans Ellegren
Genome Res.
December 2020
30
:
1727
-
1739
;
Published in Advance
November 3, 2020
,
doi:
10.1101/gr.254508.119
Abstract
Full Text
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Loss of histone H3.3 results in DNA replication defects and altered origin dynamics in
C. elegans
Maude Strobino
,
Joanna M. Wenda
,
Laura Padayachy
,
and
Florian A. Steiner
Genome Res.
December 2020
30
:
1740
-
1751
;
Published in Advance
November 10, 2020
,
doi:
10.1101/gr.260794.120
Abstract
Full Text
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Distinctive regulatory architectures of germline-active and somatic genes in
C. elegans
Jacques Serizay
,
Yan Dong
,
Jürgen Jänes
,
Michael Chesney
,
Chiara Cerrato
,
and
Julie Ahringer
Genome Res.
December 2020
30
:
1752
-
1765
;
Published in Advance
October 22, 2020
,
doi:
10.1101/gr.265934.120
Abstract
Full Text
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Global regulatory features of alternative splicing across tissues and within the nervous system of
C. elegans
Bina Koterniak
,
Pallavi P. Pilaka
,
Xicotencatl Gracida
,
Lisa-Marie Schneider
,
Iva Pritišanac
,
Yun Zhang
,
and
John A. Calarco
Genome Res.
December 2020
30
:
1766
-
1780
;
Published in Advance
October 30, 2020
,
doi:
10.1101/gr.267328.120
Abstract
Full Text
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Sequencing identifies multiple early introductions of SARS-CoV-2 to the New York City region
Matthew T. Maurano
,
Sitharam Ramaswami
,
Paul Zappile
,
Dacia Dimartino
,
Ludovic Boytard
,
André M. Ribeiro-dos-Santos
,
Nicholas A. Vulpescu
,
Gael Westby
,
Guomiao Shen
,
Xiaojun Feng
,
Megan S. Hogan
,
Manon Ragonnet-Cronin
,
Lily Geidelberg
,
Christian Marier
,
Peter Meyn
,
Yutong Zhang
,
John Cadley
,
Raquel Ordoñez
,
Raven Luther
,
Emily Huang
,
Emily Guzman
,
Carolina Arguelles-Grande
,
Kimon V. Argyropoulos
,
Margaret Black
,
Antonio Serrano
,
Melissa E. Call
,
Min Jae Kim
,
Brendan Belovarac
,
Tatyana Gindin
,
Andrew Lytle
,
Jared Pinnell
,
Theodore Vougiouklakis
,
John Chen
,
Lawrence H. Lin
,
Amy Rapkiewicz
,
Vanessa Raabe
,
Marie I. Samanovic
,
George Jour
,
Iman Osman
,
Maria Aguero-Rosenfeld
,
Mark J. Mulligan
,
Erik M. Volz
,
Paolo Cotzia
,
Matija Snuderl
,
and
Adriana Heguy
Genome Res.
December 2020
30
:
1781
-
1788
;
Published in Advance
October 22, 2020
,
doi:
10.1101/gr.266676.120
Abstract
Full Text
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Methods
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Ultrafast and scalable variant annotation and prioritization with big functional genomics data
Dandan Huang
,
Xianfu Yi
,
Yao Zhou
,
Hongcheng Yao
,
Hang Xu
,
Jianhua Wang
,
Shijie Zhang
,
Wenyan Nong
,
Panwen Wang
,
Lei Shi
,
Chenghao Xuan
,
Miaoxin Li
,
Junwen Wang
,
Weidong Li
,
Hoi Shan Kwan
,
Pak Chung Sham
,
Kai Wang
,
and
Mulin Jun Li
Genome Res.
December 2020
30
:
1789
-
1801
;
Published in Advance
October 15, 2020
,
doi:
10.1101/gr.267997.120
Abstract
Full Text
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Identifying chromosomal subpopulations based on their recombination histories advances the study of the genetic basis of phenotypic traits
Carlos Ruiz-Arenas
,
Alejandro Cáceres
,
Marcos López
,
Dolors Pelegrí-Sisó
,
Josefa González
,
and
Juan R. González
Genome Res.
December 2020
30
:
1802
-
1814
;
Published in Advance
November 17, 2020
,
doi:
10.1101/gr.258301.119
Abstract
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Cross-species analysis of enhancer logic using deep learning
Liesbeth Minnoye
,
Ibrahim Ihsan Taskiran
,
David Mauduit
,
Maurizio Fazio
,
Linde Van Aerschot
,
Gert Hulselmans
,
Valerie Christiaens
,
Samira Makhzami
,
Monika Seltenhammer
,
Panagiotis Karras
,
Aline Primot
,
Edouard Cadieu
,
Ellen van Rooijen
,
Jean-Christophe Marine
,
Giorgia Egidy
,
Ghanem-Elias Ghanem
,
Leonard Zon
,
Jasper Wouters
,
and
Stein Aerts
Genome Res.
December 2020
30
:
1815
-
1834
;
Published in Advance
July 30, 2020
,
doi:
10.1101/gr.260844.120
Abstract
Full Text
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Predicting unrecognized enhancer-mediated genome topology by an ensemble machine learning model
Li Tang
,
Matthew C. Hill
,
Jun Wang
,
Jianxin Wang
,
James F. Martin
,
and
Min Li
Genome Res.
December 2020
30
:
1835
-
1845
;
Published in Advance
November 12, 2020
,
doi:
10.1101/gr.264606.120
Abstract
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Pooled protein tagging, cellular imaging, and in situ sequencing for monitoring drug action in real time
Andreas Reicher
,
Anna Koren
,
and
Stefan Kubicek
Genome Res.
December 2020
30
:
1846
-
1855
;
Published in Advance
November 17, 2020
,
doi:
10.1101/gr.261503.120
Abstract
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Corrigendum
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Corrigendum: Transcriptome evidence reveals enhanced autophagy-lysosomal function in centenarians
Genome Res.
December 2020
30
:
1856
;
doi:
10.1101/gr.273623.120
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Reviewer Index
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Reviewer Index, Volume 30, 2020
Genome Res.
December 2020
30
:
1857
-
1861
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December 2020;
30
(12)
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