Historical RNA expression profiles from the extinct Tasmanian tiger

members magnitude magnitudeUnassigned count unassigned taxon rank Thylacine_Muscle_merged_Untrimmed_noUMIs_sequences.krakenuniq_kmers1000 139117 2759 139117 superkingdom kingdom 840 33090 840 phylum 35493 840 subphylum 131221 3193 840 clade clade 840 58023 840 clade 78536 840 clade 58024 class 840 3398 840 clade 1437183 71240 840 clade clade 840 91827 clade 840 1437201 840 clade 71275 91836 clade 840 3699 840 order 3700 family 840 840 tribe 981071 3705 genus 840 species 3711 node20.members.0.js 840 133979 clade 33154 17966 kingdom 4751 451864 1746 subkingdom phylum 1746 4890 1473 clade 716545 1473 subphylum 147538 716546 clade 1473 1473 class 147545 1473 subclass 451871 5042 1473 order 1131492 1473 family 939 genus 5052 939 subgenus 2720871 node34.members.0.js species 5061 939 534 genus 5073 254878 534 no rank 1108849 species node37.members.0.js 534 273 no rank 136265 273 node39.members.0.js species 175243 no rank 16220 57731 16220 node41.members.0.js species 175245 33208 116013 kingdom 6072 116013 clade 116013 clade 33213 33511 116013 clade 7711 116013 phylum 89593 116013 subphylum 7742 116013 clade clade 116013 7776 clade 116013 117570 clade 116013 117571 8287 80202 superclass clade 80202 1338369 80202 clade 32523 8292 class 828 8445 828 order 828 family 30380 194407 genus 828 828 node59.members.0.js 194408 species 79374 clade 32524 40674 class 79374 32525 79374 clade 9347 clade 15149 1437010 clade 15149 314146 15149 superorder 314147 9809 clade 9989 9809 order suborder 9809 1963758 337687 9809 clade family 9809 10066 39107 9809 subfamily 10088 9809 genus 862507 9809 subgenus 9809 node74.members.0.js species 10090 5340 order 9443 suborder 5340 376913 314293 infraorder 5340 parvorder 5340 9526 314295 superfamily 5340 9604 5340 family 207598 subfamily 5340 9605 5340 genus node83.members.0.js species 9606 5340 9263 64225 clade 38608 64225 order 9273 57390 family 57390 genus 9274 57390 species 9275 node88.members.0.js 9277 6835 family 9304 6835 genus 6835 node91.members.0.js species 9305 35811 superclass 7898 35811 class 186623 41665 35811 subclass 35811 infraclass 32443 35811 clade 1489341 186625 35811 no rank 186634 11961 cohort subcohort 11961 32519 11961 clade 186626 11961 superorder 186627 11961 order 7952 11961 suborder 30727 11961 family 2743709 2743711 11961 subfamily genus 11961 7954 node107.members.0.js 7955 species 11961 23850 cohort 1489388 clade 873 41705 8006 873 order 873 family 8015 504568 subfamily 873 8028 873 genus node114.members.0.js species 8032 873 22977 clade 123365 123366 22977 clade 123367 22977 clade 123368 clade 22977 123369 clade 22344 1489872 22344 clade 1489908 21687 clade 1489913 19076 superorder 76071 19076 order 28781 suborder 19076 19076 family 47757 8088 19076 subfamily 19076 genus 8089 8090 species node128.members.0.js 19076 1489920 clade 2611 1489921 2611 order suborder 1467 56717 family 1467 56718 1467 subfamily 703913 genus 1467 94311 species 181472 node135.members.0.js 1467 suborder 1144 123349 63826 family 1144 subfamily 1144 557415 210581 genus 1144 1144 species 441366 node140.members.0.js 1489874 657 clade 657 order 8064 657 family 8065 657 subfamily 390319 genus 657 289381 657 390379 species node146.members.0.js 1489838 clade 633 1489841 633 clade 1489843 633 clade 633 order 8043 1489845 suborder 633 8045 633 family 8048 genus 633 node154.members.0.js species 8049 633 61964 no rank 4298 species 100272 node156.members.0.js 4298

This Article

  1. Published in Advance July 18, 2023, doi: 10.1101/gr.277663.123 Genome Res. August 2023 vol. 33 no. 8 1299-1316
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