Historical RNA expression profiles from the extinct Tasmanian tiger

members magnitude magnitudeUnassigned count unassigned taxon rank Thylacine_Muscle_merged_over18nt_noUMIs_sequences.krakenuniq_kmers1000 1390405 2759 1388424 superkingdom kingdom 33090 3534 3534 35493 phylum 131221 3534 subphylum clade 3193 3534 clade 58023 3534 clade 3534 78536 clade 58024 3534 3398 3534 class 3534 1437183 clade clade 71240 3534 clade 91827 3534 3534 1437201 clade 71275 3534 clade 91836 3534 clade order 3699 3534 family 3700 3534 tribe 3534 981071 3534 3705 genus species node20.members.0.js 3534 3711 1343172 33154 clade kingdom 1294887 33208 clade 1294887 6072 clade 1294887 33213 clade 1294887 33511 1294887 7711 phylum 1294887 89593 subphylum clade 1294887 7742 clade 1294887 7776 117570 1294887 clade clade 1294887 117571 1123781 8287 superclass clade 1338369 1123781 32523 1123781 clade class 8292 9574 9574 8445 order 30380 5058 family 5058 194407 genus node39.members.0.js 5058 194408 species 4516 1277737 family 264009 4516 genus species node42.members.0.js 4516 1415580 clade 1114207 32524 1114207 40674 class clade 32525 1114207 9347 169294 clade clade 1437010 169294 169072 314146 superorder clade 314147 70100 9989 70100 order suborder 1963758 70100 clade 70100 337687 family 10066 70100 subfamily 39107 70100 70100 10088 genus subgenus 70100 862507 70100 10090 node57.members.0.js species order 98972 9443 98972 376913 suborder 314293 98972 infraorder 9526 98972 parvorder superfamily 98972 314295 9604 98972 family subfamily 207598 98972 9605 98972 genus 9606 98972 node66.members.0.js species superorder 222 314145 order 222 33554 379584 222 suborder family 222 9608 9611 222 genus node72.members.0.js 222 9612 species 944913 9263 clade order 38605 209363 family 209363 9265 209363 126287 subfamily genus 209363 13615 species node78.members.0.js 13616 209363 38608 735550 order family 643118 9273 9274 643118 genus species 9275 643118 node82.members.0.js family 92432 9277 genus 9304 92432 species 9305 92432 node85.members.0.js superclass 7898 171106 class 186623 171106 41665 171106 subclass infraclass 171106 32443 clade 1489341 171106 no rank 186625 171106 107340 186634 cohort subcohort 282425 1469 order 32446 1469 1489459 1469 suborder family 1469 299319 genus 299320 1469 species 1469 299321 node98.members.0.js 32519 105871 subcohort clade 186626 105871 105871 186627 superorder 105871 7952 order suborder 30727 105871 family 105871 2743709 2743711 105871 subfamily 105871 7954 genus node107.members.0.js 7955 105871 species 1489388 63766 cohort clade 123365 55000 clade 123366 55000 123367 55000 clade clade 123368 55000 4660 1489838 clade 1489841 4660 clade 1489843 4660 clade 4660 8043 order 4660 1489845 suborder family 4660 8045 4660 8048 genus node120.members.0.js 8049 4660 species clade 123369 50340 1489872 50340 clade 1489908 45612 clade 1489920 9978 clade order 1489921 9978 123349 4649 suborder family 63826 4649 subfamily 4649 557415 genus 4649 210581 species node130.members.0.js 4649 441366 suborder 5329 56717 56718 5329 family subfamily 703913 5329 5329 94311 genus node135.members.0.js 181472 5329 species 35634 1489913 superorder order 76071 35634 28781 35634 suborder 35634 47757 family subfamily 8088 35634 genus 35634 8089 species node142.members.0.js 35634 8090 clade 1489874 4728 4728 8064 order 4728 8065 family subfamily 4728 390319 genus 289381 4728 4728 390379 node148.members.0.js species clade 8766 41705 order 8006 8766 8015 8766 family 378 504567 subfamily 27772 378 genus no rank 378 2649731 node155.members.0.js 861768 378 species subfamily 504568 8388 genus 8388 8028 node158.members.0.js 8388 8032 species kingdom 48285 4751 451864 2960 subkingdom phylum 4890 2960 clade 822 716545 822 147538 subphylum 822 716546 clade 822 147545 class subclass 822 451871 5042 822 order 822 1131492 family genus 822 5073 254878 822 no rank 1108849 822 node171.members.0.js species 2138 136265 no rank node173.members.0.js 175243 2138 species no rank 57731 45325 species node175.members.0.js 45325 175245 no rank 61964 41718 100272 41718 node177.members.0.js species superkingdom 1981 2 no rank 48479 1981 node180.members.0.js 1981 77133 species

This Article

  1. Genome Res. August 2023 vol. 33 no. 8 1299-1316

Preprint Server