LYS14(1) AND mRRPE(1) AND PAC(1) => SimExpr(YGR280C) OR SimExpr(other) : 6 2
EXPR: (0.190) LYS14 (P < 0.000) mRRPE (P < 0.000) PAC (P < 0.003)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YJR070C |
NO SYMBOL |
|
|
|
GAT3, YAP5 |
| YHR052W |
CIC1 |
protein catabolism -> macromolecule catabolism, protein metabolism |
protein binding\, bridging -> protein binding\, bridging |
nucleolus, proteasome complex (sensu Eukarya) -> nucleus, cytoplasm |
HAP4, MATa1 |
| YGL099W |
LSG1 |
conjugation with cellular fusion, sporulation (sensu Saccharomyces), ribosome nucleus export -> conjugation with cellular fusion, sporulation (sensu Fungi), cytoplasm organization and biogenesis, intracellular transport, protein metabolism, protein transport |
GTPase activity -> purine nucleotide binding, hydrolase activity\, acting on acid anhydrides |
cytoplasm -> cytoplasm |
PHO4 |
| YGR280C |
PXR1 |
35S primary transcript processing, snRNA processing -> cytoplasm organization and biogenesis, RNA metabolism, transcription |
RNA binding -> RNA binding |
nucleolus -> nucleus |
|
| YML093W |
UTP14 |
processing of 20S pre-rRNA -> cytoplasm organization and biogenesis, RNA metabolism, transcription |
snoRNA binding -> RNA binding |
small nucleolar ribonucleoprotein complex -> nucleus, ribonucleoprotein complex |
|
| YNL110C |
NOP15 |
ribosomal large subunit biogenesis -> cytoplasm organization and biogenesis |
|
nucleus, nucleolus -> nucleus |
|
| |YMR290C| |
HAS1 |
|
|
nucleolus, nuclear membrane -> nucleus, endomembrane system |
RAP1 |
| |YMR259C| |
NO SYMBOL |
|
|
|
ARG80, GCR2, GTS1, HIR1, SRD1 |
| Main: |
|
cytoplasm organization and biogenesis (0.80) |
RNA binding (0.50) |
nucleus (0.83) |
GCR2 (0.20) |
| Score: |
|
0.70 |
0.17 |
0.73 |
0.000 |
| P-value: |
|
3.295E-03 (ribosome biogenesis) |
6.494E-01 (RNA binding) |
3.761E-05 (nucleolus) |
9.470E-01 (MATa1) |
CSRE(1) AND ALPHA1(1) AND STRE(1) => SimExpr(YKL085W) OR SimExpr(other) : 5 1
EXPR: (0.199) STRE (P < 0.005) CSRE (P < 0.000) ALPHA1 (P < 0.000)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| |YGL062W| |
PYC1 |
NADPH regeneration, gluconeogenesis -> coenzymes and prosthetic group metabolism, alcohol metabolism, carbohydrate metabolism, vitamin metabolism, biosynthesis, energy pathways |
pyruvate carboxylase activity -> pyruvate carboxylase activity |
cytosol -> cytoplasm |
DIG1, GCR1, STE12 |
| YKL085W |
MDH1 |
tricarboxylic acid cycle, malate metabolism -> carbohydrate metabolism, organic acid metabolism, energy pathways |
L-malate dehydrogenase activity -> L-malate dehydrogenase activity |
mitochondrial matrix -> cytoplasm |
IME4, MTH1, RTG1, YJL206C |
| YIL052C |
RPL34B |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
RME1 |
| YNL098C |
RAS2 |
pseudohyphal growth, sporulation (sensu Saccharomyces), adenylate cyclase activation, RAS protein signal transduction -> cell organization and biogenesis, sporulation, signal transduction |
RAS small monomeric GTPase activity -> RAS small monomeric GTPase activity |
plasma membrane -> plasma membrane |
ACE2, SKN7 |
| YMR291W |
NO SYMBOL |
|
|
|
RAP1 |
| YDR276C |
PMP3 |
cation transport -> transport |
|
plasma membrane -> plasma membrane |
GAT1 |
| Main: |
|
energy pathways (0.40) |
pyruvate carboxylase activity (0.25) |
cytoplasm (0.60) |
RTG1 (0.17) |
| Score: |
|
0.20 |
0.00 |
0.40 |
0.000 |
| P-value: |
|
8.572E-02 (main pathways of carbohydrate metabolism) |
2.077E+00 (enzyme activity) |
4.197E-01 (plasma membrane) |
5.170E-01 (GAT1) |
RAP1(1) AND MCM1'(1) => SimExpr(YOL120C) OR SimExpr(other) : 18 2
EXPR: (0.127) MCM1' (P < 0.000) RAP1 (P < 0.000)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| |YPL180W| |
BIT89 |
glycerol metabolism -> alcohol metabolism, glycerol ether metabolism, lipid metabolism |
|
|
REB1, RGT1, SIG1 |
| YMR230W |
RPS10B |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> cytosol, eukaryotic 43S pre-initiation complex, eukaryotic 48S initiation complex, ribosome |
FHL1, RAP1 |
| YKL006W |
RPL14A |
protein biosynthesis -> biosynthesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, GAT3, GRF10(Pho2), GTS1, RAP1 |
| YIL018W |
RPL2B |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, GAT3, PDR1, RAP1, RGM1, SWI5, YAP5 |
| YGR254W |
ENO1 |
gluconeogenesis, glycolysis -> alcohol metabolism, carbohydrate biosynthesis, carbohydrate metabolism, energy derivation by oxidation of organic compounds, biosynthesis, catabolism |
phosphopyruvate hydratase activity -> phosphopyruvate hydratase activity |
phosphopyruvate hydratase complex, cytoplasm -> cytosol, cytoplasm |
FKH2, MSN4, PDR1, SWI5, YAP5 |
| |YLR452C| |
SST2 |
signal transduction, adaptation to pheromone during conjugation with cellular fusion -> signal transduction, conjugation, perception of external stimulus, sexual reproduction, response to abiotic stimulus |
GTPase activator activity -> GTPase activator activity |
plasma membrane -> plasma membrane |
DIG1, FHL1, RAP1, STE12 |
| YNL069C |
RPL16B |
protein biosynthesis -> biosynthesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, GAT3, PDR1, RAP1, RGM1, YAP5 |
| YDL130W |
RPP1B |
protein biosynthesis, translational elongation -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, GAL4, RAP1, RFX1 |
| YPL090C |
RPS6A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> cytosol, eukaryotic 43S pre-initiation complex, eukaryotic 48S initiation complex, ribosome |
FHL1, GAT3, INO4, RAP1, YAP5 |
| YJR139C |
HOM6 |
homoserine biosynthesis, methionine metabolism, threonine metabolism -> amine metabolism, sulfur metabolism, biosynthesis, amino acid and derivative metabolism, organic acid metabolism |
homoserine dehydrogenase activity -> homoserine dehydrogenase activity |
|
HMS1, RAP1 |
| YMR142C |
RPL13B |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, GAT3, RAP1, RGM1, YAP5 |
| YGL147C |
RPL9A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, MBP1, RAP1, SWI4 |
| YGL030W |
RPL30 |
protein biosynthesis, rRNA processing, mRNA splicing, regulation of translation -> cell organization and biogenesis, biosynthesis, transcription, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya), cytoplasm -> cytosol, cytoplasm, ribosome |
FHL1, GAT3, RAP1, SFP1 |
| YOL120C |
RPL18A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, MAL13, RAP1, YAP5 |
| YML073C |
RPL6A |
protein biosynthesis, ribosomal large subunit assembly and maintenance -> biosynthesis, cell organization and biogenesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, GAT3, RAP1, YAP5 |
| YGR214W |
RPS0A |
protein biosynthesis, ribosomal small subunit assembly and maintenance -> biosynthesis, cell organization and biogenesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> cytosol, eukaryotic 43S pre-initiation complex, eukaryotic 48S initiation complex, ribosome |
FHL1, RAP1 |
| YDR450W |
RPS18A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> cytosol, eukaryotic 43S pre-initiation complex, eukaryotic 48S initiation complex, ribosome |
FHL1, GAT3, HIR2, RAP1, RGM1, YAP5 |
| YKL152C |
GPM1 |
gluconeogenesis, glycolysis -> alcohol metabolism, carbohydrate biosynthesis, carbohydrate metabolism, energy derivation by oxidation of organic compounds, biosynthesis, catabolism |
phosphoglycerate mutase activity -> phosphoglycerate mutase activity |
cytosol -> cytosol |
GCR1, GCR2, HSF1, RAP1 |
| YLR344W |
RPL26A |
protein biosynthesis -> biosynthesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, RAP1 |
| YGR085C |
RPL11B |
protein biosynthesis, ribosomal large subunit assembly and maintenance -> biosynthesis, cell organization and biogenesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, MIG1 |
| Main: |
|
biosynthesis (0.90) |
structural constituent of ribosome (0.79) |
cytosol (0.94) |
RAP1 (0.85) |
| Score: |
|
0.82 |
0.61 |
0.89 |
0.832 |
| P-value: |
|
1.901E-09 (protein biosynthesis) |
2.406E-14 (structural constituent of ribosome) |
3.100E-16 (cytosolic ribosome (sensu Eukarya)) |
1.225E-20 (FHL1) |
RAP1(1) AND mRRPE(1) => SimExpr(YOL120C) OR SimExpr(other) : 7 3
EXPR: (0.160) mRRPE (P < 0.000) RAP1 (P < 0.108)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YMR116C |
ASC1 |
|
|
cytoplasm -> cytoplasm |
FHL1, RAP1 |
| YLR249W |
YEF3 |
translational elongation -> macromolecule biosynthesis, protein metabolism |
translation elongation factor activity -> translation elongation factor activity |
ribosome -> cytoplasm, ribonucleoprotein complex |
INO2, INO4 |
| YDL130W |
RPP1B |
protein biosynthesis, translational elongation -> macromolecule biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, GAL4, RAP1, RFX1 |
| |YMR013C| |
SEC59 |
protein-ER targeting, protein amino acid glycosylation -> cytoplasm organization and biogenesis, macromolecule biosynthesis, intracellular transport, secretory pathway, protein modification, glycoprotein metabolism, protein metabolism, protein transport |
dolichol kinase activity -> dolichol kinase activity |
membrane -> membrane |
FHL1, NDD1, RAP1, RLM1, RME1 |
| |YDR449C| |
UTP6 |
processing of 20S pre-rRNA -> cytoplasm organization and biogenesis, RNA metabolism, transcription |
snoRNA binding -> snoRNA binding |
small nucleolar ribonucleoprotein complex -> nucleus, ribonucleoprotein complex |
FHL1, GAT3, HIR2, RAP1, RGM1, YAP5 |
| YGL030W |
RPL30 |
protein biosynthesis, rRNA processing, mRNA splicing, regulation of translation -> cytoplasm organization and biogenesis, macromolecule biosynthesis, transcription\, DNA-dependent, RNA metabolism, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya), cytoplasm -> cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, RAP1, SFP1 |
| YOL120C |
RPL18A |
protein biosynthesis -> macromolecule biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, MAL13, RAP1, YAP5 |
| |YMR014W| |
BUD22 |
bud site selection -> cytokinesis, cytoplasm organization and biogenesis |
|
nucleus -> nucleus |
CUP9, HAL9, HIR2, LEU3, NDD1, RLM1, ROX1, SMP1, YAP6 |
| YOL121C |
RPS19A |
protein biosynthesis -> macromolecule biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> eukaryotic 48S initiation complex, cytoplasm, ribonucleoprotein complex |
AZF1, FHL1, GCR1, GCR2, HAL9, MET31, MOT3, PDR1, RAP1, ROX1, RPH1, SMP1, YAP6, ZAP1 |
| YPR080W |
TEF1 |
translational elongation -> macromolecule biosynthesis, protein metabolism |
translation elongation factor activity -> translation elongation factor activity |
ribosome -> cytoplasm, ribonucleoprotein complex |
FHL1, PDR1, RAP1, YAP5 |
| Main: |
|
protein metabolism (0.78) |
structural constituent of ribosome (0.50) |
cytoplasm (0.70) |
RAP1 FHL1 (0.80) |
| Score: |
|
0.72 |
0.25 |
0.62 |
0.689 |
| P-value: |
|
3.639E-04 (translational elongation) |
6.981E-03 (translation elongation factor activity) |
1.478E-04 (ribonucleoprotein complex) |
6.276E-10 (FHL1) |
RAP1(1) AND SWI5(1) AND MCM1'(1) => SimExpr(YOL120C) OR SimExpr(other) : 6 1
EXPR: (0.121) SWI5 (P < 0.000) MCM1' (P < 0.000) RAP1 (P < 0.030)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YKL006W |
RPL14A |
protein biosynthesis -> protein biosynthesis |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosolic ribosome (sensu Eukarya), large ribosomal subunit |
FHL1, GAT3, GRF10(Pho2), GTS1, RAP1 |
| |YLR452C| |
SST2 |
signal transduction, adaptation to pheromone during conjugation with cellular fusion -> signal transduction, adaptation to pheromone during conjugation with cellular fusion |
GTPase activator activity -> GTPase activator activity |
plasma membrane -> plasma membrane |
DIG1, FHL1, RAP1, STE12 |
| YNL069C |
RPL16B |
protein biosynthesis -> protein biosynthesis |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosolic ribosome (sensu Eukarya), large ribosomal subunit |
FHL1, GAT3, PDR1, RAP1, RGM1, YAP5 |
| YGL030W |
RPL30 |
protein biosynthesis, rRNA processing, mRNA splicing, regulation of translation -> protein biosynthesis, rRNA processing, mRNA splicing, regulation of translation |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya), cytoplasm -> cytosolic ribosome (sensu Eukarya), cytoplasm, large ribosomal subunit |
FHL1, GAT3, RAP1, SFP1 |
| YOL120C |
RPL18A |
protein biosynthesis -> protein biosynthesis |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosolic ribosome (sensu Eukarya), large ribosomal subunit |
FHL1, MAL13, RAP1, YAP5 |
| YDR450W |
RPS18A |
protein biosynthesis -> protein biosynthesis |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> cytosolic ribosome (sensu Eukarya), eukaryotic 43S pre-initiation complex, eukaryotic 48S initiation complex, small ribosomal subunit |
FHL1, GAT3, HIR2, RAP1, RGM1, YAP5 |
| YLR344W |
RPL26A |
protein biosynthesis -> protein biosynthesis |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosolic ribosome (sensu Eukarya), large ribosomal subunit |
FHL1, RAP1 |
| Main: |
|
protein biosynthesis (0.86) |
structural constituent of ribosome (0.86) |
cytosolic ribosome (sensu Eukarya) (0.86) |
RAP1 FHL1 (1.00) |
| Score: |
|
0.71 |
0.71 |
0.71 |
1.000 |
| P-value: |
|
1.319E-04 (protein biosynthesis) |
2.360E-06 (structural constituent of ribosome) |
5.663E-07 (cytosolic ribosome (sensu Eukarya)) |
2.380E-10 (FHL1) |
RAP1(1) AND ALPHA1'(1) AND MCM1'(1) => SimExpr(YOL120C) : 7
EXPR: (0.112) ALPHA1' (P < 0.000) MCM1' (P < 0.000) RAP1 (P < 0.022)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YGR254W |
ENO1 |
gluconeogenesis, glycolysis -> alcohol metabolism, carbohydrate biosynthesis, carbohydrate metabolism, energy derivation by oxidation of organic compounds, biosynthesis, catabolism |
phosphopyruvate hydratase activity -> phosphopyruvate hydratase activity |
phosphopyruvate hydratase complex, cytoplasm -> cytosol, cytoplasm |
FKH2, MSN4, PDR1, SWI5, YAP5 |
| YDL130W |
RPP1B |
protein biosynthesis, translational elongation -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, GAL4, RAP1, RFX1 |
| YPL090C |
RPS6A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> cytosol, eukaryotic 43S pre-initiation complex, eukaryotic 48S initiation complex, ribosome |
FHL1, GAT3, INO4, RAP1, YAP5 |
| YMR142C |
RPL13B |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, GAT3, RAP1, RGM1, YAP5 |
| YOL120C |
RPL18A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, MAL13, RAP1, YAP5 |
| YGR214W |
RPS0A |
protein biosynthesis, ribosomal small subunit assembly and maintenance -> biosynthesis, cell organization and biogenesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> cytosol, eukaryotic 43S pre-initiation complex, eukaryotic 48S initiation complex, ribosome |
FHL1, RAP1 |
| YLR344W |
RPL26A |
protein biosynthesis -> biosynthesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, RAP1 |
| Main: |
|
biosynthesis (1.00) |
structural constituent of ribosome (0.86) |
cytosol (1.00) |
RAP1 FHL1 (0.86) |
| Score: |
|
1.00 |
0.71 |
1.00 |
0.857 |
| P-value: |
|
1.173E-04 (protein biosynthesis) |
1.348E-06 (structural constituent of ribosome) |
7.722E-07 (cytosolic ribosome (sensu Eukarya)) |
5.806E-08 (FHL1) |
CSRE(1) AND HAP234(1) => SimExpr(YOR136W) OR SimExpr(other) : 5 1
EXPR: (0.172) CSRE (P < 0.000) HAP234 (P < 0.007)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| |YKL141W| |
SDH3 |
oxidative phosphorylation\, succinate to ubiquinone, tricarboxylic acid cycle -> electron transport, carbohydrate metabolism, phosphorus metabolism, energy pathways |
succinate dehydrogenase activity -> succinate dehydrogenase activity |
respiratory chain complex II (sensu Eukarya) -> cytoplasm, respiratory chain complex II, succinate dehydrogenase complex (ubiquinone), inner membrane |
|
| YPR145W |
ASN1 |
asparagine biosynthesis -> amine metabolism, amino acid and derivative metabolism, organic acid metabolism, biosynthesis |
asparagine synthase (glutamine-hydrolyzing) activity -> asparagine synthase (glutamine-hydrolyzing) activity |
|
DAL81, GCN4, GLN3, MET4, RAP1, SUM1 |
| YLR304C |
ACO1 |
tricarboxylic acid cycle, citrate metabolism, glutamate biosynthesis, propionate metabolism -> carbohydrate metabolism, amine metabolism, organic acid metabolism, energy pathways, amino acid and derivative metabolism, biosynthesis |
aconitate hydratase activity -> aconitate hydratase activity |
cytosol, mitochondrial matrix -> cytoplasm |
CIN5, YAP6 |
| YNL069C |
RPL16B |
protein biosynthesis -> biosynthesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, PDR1, RAP1, RGM1, YAP5 |
| YOR136W |
IDH2 |
tricarboxylic acid cycle, isocitrate metabolism, glutamate biosynthesis -> carbohydrate metabolism, amine metabolism, organic acid metabolism, energy pathways, amino acid and derivative metabolism, biosynthesis |
isocitrate dehydrogenase (NAD+) activity -> isocitrate dehydrogenase (NAD+) activity |
mitochondrial matrix, mitochondrion -> cytoplasm |
MET4 |
| YFR033C |
QCR6 |
aerobic respiration, oxidative phosphorylation\, ubiquinone to cytochrome c -> energy pathways, electron transport, phosphorus metabolism |
ubiquinol-cytochrome c reductase activity -> ubiquinol-cytochrome c reductase activity |
mitochondrion, respiratory chain complex III (sensu Eukarya) -> cytoplasm, respiratory chain complex III, inner membrane |
HAP4, MBP1 |
| Main: |
|
biosynthesis (0.67) |
RNA binding (0.17) |
cytoplasm (1.00) |
RAP1 MET4 (0.40) |
| Score: |
|
0.73 |
0.00 |
1.00 |
0.200 |
| P-value: |
|
4.809E-05 (tricarboxylic acid cycle) |
3.006E-02 (oxidoreductase activity) |
7.682E-03 (mitochondrial electron transport chain) |
5.318E-02 (MET4) |
RAP1(1) AND MCM1'(1) => SimExpr(YGR254W) OR SimExpr(other) : 18 2
RAP1(1) AND ALPHA1(1) AND SFF(1) => SimExpr(YGR254W) OR SimExpr(other) : 14 3
EXPR: (0.232) SFF (P < 0.000) RAP1 (P < 0.038) ALPHA1 (P < 0.000)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YMR116C |
ASC1 |
|
|
cytoplasm -> cytoplasm |
FHL1, RAP1 |
| |YMR224C| |
MRE11 |
DNA repair, double-strand break repair via nonhomologous end-joining, meiotic DNA double-strand break formation, meiotic DNA double-strand break processing, double-strand break repair via break-induced replication -> DNA metabolism, cell proliferation, catabolism |
endonuclease activity, 3'-5' exonuclease activity, protein binding -> endonuclease activity, 3'-5' exonuclease activity, protein binding |
nucleus -> nucleus |
RAP1 |
| YLR249W |
YEF3 |
translational elongation -> biosynthesis, protein metabolism |
translation elongation factor activity -> translation elongation factor activity |
ribosome -> cytoplasm, ribonucleoprotein complex |
INO2, INO4 |
| |YKR092C| |
SRP40 |
nucleocytoplasmic transport -> transport |
chaperone activity -> chaperone activity |
nucleolus -> nucleus |
CUP9, MET4, RAP1 |
| YKL006W |
RPL14A |
protein biosynthesis -> biosynthesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, GRF10(Pho2), GTS1, RAP1 |
| YKR057W |
RPS21A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> eukaryotic 48S initiation complex, cytoplasm, ribonucleoprotein complex |
ABF1, FHL1 |
| YGR254W |
ENO1 |
gluconeogenesis, glycolysis -> alcohol metabolism, carbohydrate biosynthesis, carbohydrate metabolism, energy derivation by oxidation of organic compounds, biosynthesis, catabolism |
phosphopyruvate hydratase activity -> phosphopyruvate hydratase activity |
phosphopyruvate hydratase complex, cytoplasm -> cytoplasm |
FKH2, MSN4, PDR1, SWI5, YAP5 |
| YJR139C |
HOM6 |
homoserine biosynthesis, methionine metabolism, threonine metabolism -> amine metabolism, sulfur metabolism, biosynthesis, amino acid and derivative metabolism, organic acid metabolism |
homoserine dehydrogenase activity -> homoserine dehydrogenase activity |
|
HMS1, RAP1 |
| YGL115W |
SNF4 |
regulation of transcription from Pol II promoter, peroxisome organization and biogenesis -> cell organization and biogenesis, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
protein kinase activator activity -> protein kinase activator activity |
plasma membrane, nucleus, cytoplasm -> plasma membrane, nucleus, cytoplasm |
BAS1, CAD1, MAC1, NRG1, PDR1, RAP1, SMP1, YAP5 |
| YML073C |
RPL6A |
protein biosynthesis, ribosomal large subunit assembly and maintenance -> biosynthesis, cell organization and biogenesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, RAP1, YAP5 |
| YKL180W |
RPL17A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya), cytoplasm -> cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, RAP1 |
| YMR231W |
PEP5 |
nonselective vesicle docking, homotypic vacuole fusion (non-autophagic), Golgi to endosome transport, late endosome to vacuole transport -> cell organization and biogenesis, transport, vesicle-mediated transport |
|
vacuolar membrane (sensu Fungi) -> cytoplasm, vacuole |
ARG81, DOT6, HAL9, HAP2, MCM1, YAP1 |
| YKL152C |
GPM1 |
gluconeogenesis, glycolysis -> alcohol metabolism, carbohydrate biosynthesis, carbohydrate metabolism, energy derivation by oxidation of organic compounds, biosynthesis, catabolism |
phosphoglycerate mutase activity -> phosphoglycerate mutase activity |
cytosol -> cytoplasm |
GCR1, GCR2, HSF1, RAP1 |
| YML026C |
RPS18B |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> eukaryotic 48S initiation complex, cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, RAP1, RGM1, SWI4, YAP5 |
| YPL131W |
RPL5 |
protein biosynthesis, ribosomal large subunit assembly and maintenance -> biosynthesis, cell organization and biogenesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, RAP1 |
| |YDL043C| |
PRP11 |
spliceosome assembly -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
RNA binding -> RNA binding |
snRNP U2 -> nucleus, ribonucleoprotein complex |
DAL81, STP1 |
| YGR085C |
RPL11B |
protein biosynthesis, ribosomal large subunit assembly and maintenance -> biosynthesis, cell organization and biogenesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, MIG1 |
| Main: |
|
biosynthesis (0.69) |
structural constituent of ribosome (0.47) |
cytoplasm (0.81) |
RAP1 (0.65) |
| Score: |
|
0.55 |
0.23 |
0.77 |
0.522 |
| P-value: |
|
3.514E-03 (ribosomal large subunit assembly and maintenance) |
2.744E-04 (structural constituent of ribosome) |
7.319E-05 (cytosolic ribosome (sensu Eukarya)) |
8.753E-09 (RAP1) |
RAP1(1) AND ALPHA1(1) AND SFF'(1) => SimExpr(YGR254W) OR SimExpr(other) : 14 4
EXPR: (0.237) SFF' (P < 0.000) RAP1 (P < 0.072) ALPHA1 (P < 0.000)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YMR116C |
ASC1 |
|
|
cytoplasm -> cytoplasm |
FHL1, RAP1 |
| |YMR224C| |
MRE11 |
DNA repair, double-strand break repair via nonhomologous end-joining, meiotic DNA double-strand break formation, meiotic DNA double-strand break processing, double-strand break repair via break-induced replication -> DNA metabolism, cell proliferation, catabolism |
endonuclease activity, 3'-5' exonuclease activity, protein binding -> endonuclease activity, 3'-5' exonuclease activity, protein binding |
nucleus -> nucleus |
RAP1 |
| YLR249W |
YEF3 |
translational elongation -> biosynthesis, protein metabolism |
translation elongation factor activity -> translation elongation factor activity |
ribosome -> cytoplasm, ribonucleoprotein complex |
INO2, INO4 |
| |YKR092C| |
SRP40 |
nucleocytoplasmic transport -> transport |
chaperone activity -> chaperone activity |
nucleolus -> nucleus |
CUP9, MET4, RAP1 |
| YKL006W |
RPL14A |
protein biosynthesis -> biosynthesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, GRF10(Pho2), GTS1, RAP1 |
| YKR057W |
RPS21A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> eukaryotic 48S initiation complex, cytoplasm, ribonucleoprotein complex |
ABF1, FHL1 |
| YGR254W |
ENO1 |
gluconeogenesis, glycolysis -> alcohol metabolism, carbohydrate biosynthesis, carbohydrate metabolism, energy derivation by oxidation of organic compounds, biosynthesis, catabolism |
phosphopyruvate hydratase activity -> phosphopyruvate hydratase activity |
phosphopyruvate hydratase complex, cytoplasm -> cytoplasm |
FKH2, MSN4, PDR1, SWI5, YAP5 |
| YJR139C |
HOM6 |
homoserine biosynthesis, methionine metabolism, threonine metabolism -> amine metabolism, sulfur metabolism, biosynthesis, amino acid and derivative metabolism, organic acid metabolism |
homoserine dehydrogenase activity -> homoserine dehydrogenase activity |
|
HMS1, RAP1 |
| |YMR013C| |
SEC59 |
protein-ER targeting, protein amino acid glycosylation -> cell organization and biogenesis, biosynthesis, protein modification, protein metabolism, transport |
dolichol kinase activity -> dolichol kinase activity |
membrane -> membrane |
FHL1, NDD1, RAP1, RLM1, RME1 |
| YGL115W |
SNF4 |
regulation of transcription from Pol II promoter, peroxisome organization and biogenesis -> cell organization and biogenesis, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
protein kinase activator activity -> protein kinase activator activity |
plasma membrane, nucleus, cytoplasm -> membrane, nucleus, cytoplasm |
BAS1, CAD1, MAC1, NRG1, PDR1, RAP1, SMP1, YAP5 |
| YML073C |
RPL6A |
protein biosynthesis, ribosomal large subunit assembly and maintenance -> biosynthesis, cell organization and biogenesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, RAP1, YAP5 |
| YKL180W |
RPL17A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya), cytoplasm -> cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, RAP1 |
| YMR231W |
PEP5 |
nonselective vesicle docking, homotypic vacuole fusion (non-autophagic), Golgi to endosome transport, late endosome to vacuole transport -> cell organization and biogenesis, transport, vesicle-mediated transport |
|
vacuolar membrane (sensu Fungi) -> cytoplasm, vacuole |
ARG81, DOT6, HAL9, HAP2, MCM1, YAP1 |
| YKL152C |
GPM1 |
gluconeogenesis, glycolysis -> alcohol metabolism, carbohydrate biosynthesis, carbohydrate metabolism, energy derivation by oxidation of organic compounds, biosynthesis, catabolism |
phosphoglycerate mutase activity -> phosphoglycerate mutase activity |
cytosol -> cytoplasm |
GCR1, GCR2, HSF1, RAP1 |
| YML026C |
RPS18B |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> eukaryotic 48S initiation complex, cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, RAP1, RGM1, SWI4, YAP5 |
| YPL131W |
RPL5 |
protein biosynthesis, ribosomal large subunit assembly and maintenance -> biosynthesis, cell organization and biogenesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, RAP1 |
| |YDL043C| |
PRP11 |
spliceosome assembly -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
RNA binding -> RNA binding |
snRNP U2 -> nucleus, ribonucleoprotein complex |
DAL81, STP1 |
| YGR085C |
RPL11B |
protein biosynthesis, ribosomal large subunit assembly and maintenance -> biosynthesis, cell organization and biogenesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, MIG1 |
| Main: |
|
biosynthesis (0.71) |
structural constituent of ribosome (0.44) |
cytoplasm (0.76) |
RAP1 (0.67) |
| Score: |
|
0.59 |
0.20 |
0.68 |
0.549 |
| P-value: |
|
1.754E-03 (biosynthesis) |
4.264E-04 (structural constituent of ribosome) |
1.154E-04 (cytosolic ribosome (sensu Eukarya)) |
8.002E-10 (RAP1) |
RAP1(1) AND ALPHA1(1) AND MCM1'(1) => SimExpr(YGR254W) : 9
EXPR: (0.189) MCM1' (P < 0.000) RAP1 (P < 0.005) ALPHA1 (P < 0.000)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YKL006W |
RPL14A |
protein biosynthesis -> biosynthesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, GAT3, GRF10(Pho2), GTS1, RAP1 |
| YIL018W |
RPL2B |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, GAT3, PDR1, RAP1, RGM1, SWI5, YAP5 |
| YGR254W |
ENO1 |
gluconeogenesis, glycolysis -> alcohol metabolism, carbohydrate biosynthesis, carbohydrate metabolism, energy derivation by oxidation of organic compounds, biosynthesis, catabolism |
phosphopyruvate hydratase activity -> phosphopyruvate hydratase activity |
phosphopyruvate hydratase complex, cytoplasm -> cytosol, cytoplasm |
FKH2, MSN4, PDR1, SWI5, YAP5 |
| YDL130W |
RPP1B |
protein biosynthesis, translational elongation -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, GAL4, RAP1, RFX1 |
| YJR139C |
HOM6 |
homoserine biosynthesis, methionine metabolism, threonine metabolism -> amine metabolism, sulfur metabolism, biosynthesis, amino acid and derivative metabolism, organic acid metabolism |
homoserine dehydrogenase activity -> homoserine dehydrogenase activity |
|
HMS1, RAP1 |
| YMR142C |
RPL13B |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, GAT3, RAP1, RGM1, YAP5 |
| YML073C |
RPL6A |
protein biosynthesis, ribosomal large subunit assembly and maintenance -> biosynthesis, cell organization and biogenesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, GAT3, RAP1, YAP5 |
| YKL152C |
GPM1 |
gluconeogenesis, glycolysis -> alcohol metabolism, carbohydrate biosynthesis, carbohydrate metabolism, energy derivation by oxidation of organic compounds, biosynthesis, catabolism |
phosphoglycerate mutase activity -> phosphoglycerate mutase activity |
cytosol -> cytosol |
GCR1, GCR2, HSF1, RAP1 |
| YGR085C |
RPL11B |
protein biosynthesis, ribosomal large subunit assembly and maintenance -> biosynthesis, cell organization and biogenesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, MIG1 |
| Main: |
|
biosynthesis (1.00) |
structural constituent of ribosome (0.67) |
cytosol (1.00) |
RAP1 (0.78) |
| Score: |
|
1.00 |
0.42 |
1.00 |
0.806 |
| P-value: |
|
3.235E-05 (biosynthesis) |
2.921E-05 (structural constituent of ribosome) |
9.879E-08 (cytosolic large ribosomal subunit (sensu Eukarya)) |
9.189E-07 (FHL1) |
CSRE(1) AND RAP1(1) AND MCM1'(1) => SimExpr(YGR254W) : 9
EXPR: (0.191) MCM1' (P < 0.000) CSRE (P < 0.000) RAP1 (P < 0.002)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YGR254W |
ENO1 |
gluconeogenesis, glycolysis -> alcohol metabolism, carbohydrate biosynthesis, carbohydrate metabolism, energy derivation by oxidation of organic compounds, biosynthesis, catabolism |
phosphopyruvate hydratase activity -> phosphopyruvate hydratase activity |
phosphopyruvate hydratase complex, cytoplasm -> cytosol, cytoplasm |
FKH2, MSN4, PDR1, SWI5, YAP5 |
| YNL069C |
RPL16B |
protein biosynthesis -> biosynthesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, GAT3, PDR1, RAP1, RGM1, YAP5 |
| YPL090C |
RPS6A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> cytosol, eukaryotic 43S pre-initiation complex, eukaryotic 48S initiation complex, ribosome |
FHL1, GAT3, INO4, RAP1, YAP5 |
| YGL147C |
RPL9A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, MBP1, RAP1, SWI4 |
| YML073C |
RPL6A |
protein biosynthesis, ribosomal large subunit assembly and maintenance -> biosynthesis, cell organization and biogenesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, GAT3, RAP1, YAP5 |
| YGR214W |
RPS0A |
protein biosynthesis, ribosomal small subunit assembly and maintenance -> biosynthesis, cell organization and biogenesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> cytosol, eukaryotic 43S pre-initiation complex, eukaryotic 48S initiation complex, ribosome |
FHL1, RAP1 |
| YDR450W |
RPS18A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> cytosol, eukaryotic 43S pre-initiation complex, eukaryotic 48S initiation complex, ribosome |
FHL1, GAT3, HIR2, RAP1, RGM1, YAP5 |
| YKL152C |
GPM1 |
gluconeogenesis, glycolysis -> alcohol metabolism, carbohydrate biosynthesis, carbohydrate metabolism, energy derivation by oxidation of organic compounds, biosynthesis, catabolism |
phosphoglycerate mutase activity -> phosphoglycerate mutase activity |
cytosol -> cytosol |
GCR1, GCR2, HSF1, RAP1 |
| YLR344W |
RPL26A |
protein biosynthesis -> biosynthesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, RAP1 |
| Main: |
|
biosynthesis (1.00) |
structural constituent of ribosome (0.78) |
cytosol (1.00) |
RAP1 (0.89) |
| Score: |
|
1.00 |
0.58 |
1.00 |
0.889 |
| P-value: |
|
3.145E-05 (biosynthesis) |
7.679E-07 (structural constituent of ribosome) |
3.470E-08 (cytosol) |
1.004E-08 (FHL1) |
RAP1(1) AND ALPHA1'(1) AND MCM1'(1) => SimExpr(YGR254W) : 7
REB1(1) AND ALPHA2(1) AND SWI5(1) => SimExpr(YOR025W) : 5
EXPR: (0.181) ALPHA2 (P < 0.000) SWI5 (P < 0.000) REB1 (P < 0.000)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YOR152C |
NO SYMBOL |
|
|
|
HIR2 |
| YNL197C |
WHI3 |
regulation of cell size -> cell organization and biogenesis |
RNA binding -> RNA binding |
|
REB1 |
| YNL111C |
CYB5 |
sterol biosynthesis -> alcohol metabolism, biosynthesis, lipid metabolism |
electron transporter activity -> electron transporter activity |
microsome -> microsome |
ABF1, GCR2, GTS1, NRG1, REB1, ROX1 |
| YNL090W |
RHO2 |
microtubule-based process, cell wall organization and biogenesis, small GTPase mediated signal transduction, establishment of cell polarity (sensu Saccharomyces), actin filament organization -> signal transduction, cell organization and biogenesis, organelle organization and biogenesis |
Rho small monomeric GTPase activity, signal transducer activity -> Rho small monomeric GTPase activity, signal transducer activity |
intracellular -> intracellular |
INO4, REB1 |
| YOR025W |
HST3 |
chromatin silencing at telomere, short-chain fatty acid metabolism -> cell organization and biogenesis, lipid metabolism, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism, transcription, organic acid metabolism |
DNA binding -> DNA binding |
intracellular -> intracellular |
IXR1, NDD1 |
| Main: |
|
cell organization and biogenesis (0.75) |
DNA binding (0.25) |
intracellular (0.67) |
REB1 (0.60) |
| Score: |
|
0.67 |
0.00 |
0.33 |
0.300 |
| P-value: |
|
1.465E-01 (lipid metabolism) |
7.055E-01 (binding) |
3.995E+00 (intracellular) |
5.118E-03 (REB1) |
CSRE(1) AND HAP234(1) => SimExpr(YLR304C) : 6
CSRE(1) AND PDR(1) AND ATRepeat(1) => SimExpr(YLR304C) : 5
EXPR: (0.171) PDR (P < 0.003) ATRepeat (P < 0.000) CSRE (P < 0.000)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YGL062W |
PYC1 |
NADPH regeneration, gluconeogenesis -> coenzymes and prosthetic group metabolism, alcohol metabolism, carbohydrate metabolism, vitamin metabolism, biosynthesis, energy pathways |
pyruvate carboxylase activity -> pyruvate carboxylase activity |
cytosol -> cytoplasm |
DIG1, GCR1, STE12 |
| YKL141W |
SDH3 |
oxidative phosphorylation\, succinate to ubiquinone, tricarboxylic acid cycle -> electron transport, carbohydrate metabolism, phosphorus metabolism, energy pathways |
succinate dehydrogenase activity -> succinate dehydrogenase activity |
respiratory chain complex II (sensu Eukarya) -> cytoplasm, respiratory chain complex II, succinate dehydrogenase complex (ubiquinone), inner membrane |
|
| YLR304C |
ACO1 |
tricarboxylic acid cycle, citrate metabolism, glutamate biosynthesis, propionate metabolism -> carbohydrate metabolism, amine metabolism, organic acid metabolism, energy pathways, amino acid and derivative metabolism, biosynthesis |
aconitate hydratase activity -> aconitate hydratase activity |
cytosol, mitochondrial matrix -> cytoplasm |
CIN5, YAP6 |
| YOR153W |
PDR5 |
drug transport, response to drug -> transport, response to abiotic stimulus |
xenobiotic-transporting ATPase activity -> xenobiotic-transporting ATPase activity |
plasma membrane -> plasma membrane |
YAP6 |
| YNL231C |
PDR16 |
phospholipid transport, sterol biosynthesis, response to drug -> transport, alcohol metabolism, response to abiotic stimulus, biosynthesis, lipid metabolism |
phosphatidylinositol transporter activity -> phosphatidylinositol transporter activity |
cytoplasm -> cytoplasm |
HSF1, MBP1, SWI4, YAP1 |
| Main: |
|
biosynthesis (0.60) |
pyruvate carboxylase activity (0.20) |
cytoplasm (0.80) |
YAP6 (0.50) |
| Score: |
|
0.60 |
0.00 |
0.60 |
0.167 |
| P-value: |
|
2.167E-03 (main pathways of carbohydrate metabolism) |
5.353E-01 (transporter activity) |
7.999E-01 (cytosol) |
1.030E-01 (YAP6) |
CSRE(1) AND RAP1(1) => SimExpr(YML073C) OR SimExpr(other) : 12 2
EXPR: (0.158) CSRE (P < 0.000) RAP1 (P < 0.026)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YOR096W |
RPS7A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> eukaryotic 48S initiation complex, cytoplasm, ribonucleoprotein complex |
FHL1, FKH2, RAP1 |
| YGR254W |
ENO1 |
gluconeogenesis, glycolysis -> alcohol metabolism, carbohydrate biosynthesis, carbohydrate metabolism, energy derivation by oxidation of organic compounds, biosynthesis, catabolism |
phosphopyruvate hydratase activity -> phosphopyruvate hydratase activity |
phosphopyruvate hydratase complex, cytoplasm -> cytoplasm |
FKH2, MSN4, PDR1, SWI5, YAP5 |
| YNL069C |
RPL16B |
protein biosynthesis -> biosynthesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, PDR1, RAP1, RGM1, YAP5 |
| YPL090C |
RPS6A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> eukaryotic 48S initiation complex, cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, INO4, RAP1, YAP5 |
| YJR145C |
RPS4A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya), cytoplasm -> eukaryotic 48S initiation complex, cytoplasm, ribonucleoprotein complex |
ACE2, CIN5, FHL1, INO4, MTH1, RAP1, YAP6 |
| |YOR213C| |
SAS5 |
chromatin silencing at telomere -> cell organization and biogenesis, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism, transcription |
acetyltransferase activity -> acetyltransferase activity |
nuclear chromosome\, telomeric region, nuclear chromatin -> chromosome, nuclear chromosome |
GRF10(Pho2), SUM1 |
| YGL147C |
RPL9A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, MBP1, RAP1, SWI4 |
| YML073C |
RPL6A |
protein biosynthesis, ribosomal large subunit assembly and maintenance -> biosynthesis, cell organization and biogenesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, RAP1, YAP5 |
| YGR214W |
RPS0A |
protein biosynthesis, ribosomal small subunit assembly and maintenance -> biosynthesis, cell organization and biogenesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> eukaryotic 48S initiation complex, cytoplasm, ribonucleoprotein complex |
FHL1, RAP1 |
| YDR450W |
RPS18A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> eukaryotic 48S initiation complex, cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, HIR2, RAP1, RGM1, YAP5 |
| YKL152C |
GPM1 |
gluconeogenesis, glycolysis -> alcohol metabolism, carbohydrate biosynthesis, carbohydrate metabolism, energy derivation by oxidation of organic compounds, biosynthesis, catabolism |
phosphoglycerate mutase activity -> phosphoglycerate mutase activity |
cytosol -> cytoplasm |
GCR1, GCR2, HSF1, RAP1 |
| YLR344W |
RPL26A |
protein biosynthesis -> biosynthesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, RAP1 |
| YOR312C |
RPL20B |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, FKH2, GAT3, RAP1 |
| |YDL043C| |
PRP11 |
spliceosome assembly -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
RNA binding -> RNA binding |
snRNP U2 -> nucleus, ribonucleoprotein complex |
DAL81, STP1 |
| Main: |
|
biosynthesis (0.86) |
structural constituent of ribosome (0.71) |
cytoplasm (0.86) |
RAP1 (0.79) |
| Score: |
|
0.76 |
0.53 |
0.84 |
0.670 |
| P-value: |
|
8.659E-06 (protein biosynthesis) |
3.542E-09 (structural constituent of ribosome) |
2.930E-10 (cytosolic ribosome (sensu Eukarya)) |
8.001E-12 (FHL1) |
CSRE(1) AND RAP1(1) AND MCM1'(1) => SimExpr(YML073C) : 9
RAP1(1) AND ALPHA1(1) AND MCM1'(1) => SimExpr(YML073C) : 9
CSRE(1) AND RAP1(1) => SimExpr(YGL147C) OR SimExpr(other) : 12 2
CSRE(1) AND RAP1(1) AND MCM1'(1) => SimExpr(YGL147C) : 9
CSRE(1) AND RAP1(1) => SimExpr(YJR145C) OR SimExpr(other) : 11 3
ABF1(1) AND ALPHA1'(1) AND PAC(1) => SimExpr(YPR010C) : 5
EXPR: (0.166) ABF1 (P < 0.000) ALPHA1' (P < 0.000) PAC (P < 0.000)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YOL041C |
NOP12 |
rRNA metabolism -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
RNA binding -> RNA binding |
nucleolus -> nucleus |
GTS1, MET31 |
| YPR010C |
RPA135 |
transcription from Pol I promoter -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
DNA-directed RNA polymerase activity -> transferase activity\, transferring phosphorus-containing groups |
DNA-directed RNA polymerase I complex -> nucleus |
ROX1, SIG1 |
| YNL292W |
PUS4 |
tRNA modification -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
pseudouridylate synthase activity -> carbon-oxygen lyase activity |
mitochondrion, nucleus -> cytoplasm, nucleus |
RCS1 |
| YNL112W |
DBP2 |
|
RNA helicase activity -> RNA binding |
bud neck -> site of polarized growth (sensu Fungi) |
|
| YKL014C |
NO SYMBOL |
|
|
|
ABF1 |
| Main: |
|
nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism (1.00) |
RNA binding (0.50) |
nucleus (0.75) |
ABF1 (0.25) |
| Score: |
|
1.00 |
0.17 |
0.50 |
0.000 |
| P-value: |
|
2.994E-01 (RNA metabolism) |
3.258E-01 (RNA binding) |
9.452E-02 (nucleolus) |
3.281E-01 (SIG1) |
CSRE(1) AND RAP1(1) => SimExpr(YOR312C) OR SimExpr(other) : 12 2
CSRE(1) AND HAP234(1) => SimExpr(YFR033C) OR SimExpr(other) : 5 1
CSRE(1) AND ALPHA1(1) AND SFF'(1) AND CCA(1) => SimExpr(YOL082W) OR SimExpr(other) : 5 2
EXPR: (0.218) SFF' (P < 0.000) CCA (P < 0.002) CSRE (P < 0.000) ALPHA1 (P < 0.000)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| |YKL141W| |
SDH3 |
oxidative phosphorylation\, succinate to ubiquinone, tricarboxylic acid cycle -> electron transport, carbohydrate metabolism, phosphorus metabolism, energy pathways |
succinate dehydrogenase activity -> succinate dehydrogenase activity |
respiratory chain complex II (sensu Eukarya) -> cytoplasm, respiratory chain complex II, succinate dehydrogenase complex (ubiquinone), inner membrane |
|
| YOR152C |
NO SYMBOL |
|
|
|
HIR2 |
| YLR328W |
NMA1 |
nicotinamide adenine dinucleotide metabolism -> coenzymes and prosthetic group metabolism, vitamin metabolism |
nicotinamide-nucleotide adenylyltransferase activity -> nicotinamide-nucleotide adenylyltransferase activity |
|
CIN5, MSN1, ROX1 |
| YOL082W |
CVT19 |
protein-vacuolar targeting -> cell organization and biogenesis, protein metabolism, transport |
protein binding -> protein binding |
vacuole, peripheral membrane protein of membrane fraction, cytoplasm -> cytoplasm, membrane fraction |
GTS1, MCM1, RAP1, STE12 |
| YMR008C |
PLB1 |
glycerophospholipid metabolism -> lipid metabolism |
lysophospholipase activity -> lysophospholipase activity |
cell wall (sensu Fungi) -> cell wall |
RAP1 |
| |YLR406C| |
RPL31B |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, FKH1, MTH1, RAP1 |
| YKR003W |
OSH6 |
steroid biosynthesis -> biosynthesis, lipid metabolism |
oxysterol binding -> oxysterol binding |
|
|
| Main: |
|
biosynthesis (0.33) |
nicotinamide-nucleotide adenylyltransferase activity (0.17) |
cytoplasm (0.75) |
RAP1 (0.60) |
| Score: |
|
0.20 |
0.00 |
0.50 |
0.300 |
| P-value: |
|
2.539E-01 (lipid metabolism) |
2.769E+00 (binding) |
4.385E+00 (cytoplasm) |
7.002E-02 (RAP1) |
RAP1(1) AND MCM1'(1) => SimExpr(YPL090C) OR SimExpr(other) : 19 1
CSRE(1) AND RAP1(1) => SimExpr(YPL090C) OR SimExpr(other) : 12 2
CSRE(1) AND RAP1(1) AND MCM1'(1) => SimExpr(YPL090C) : 9
RAP1(1) AND ALPHA1'(1) AND MCM1'(1) => SimExpr(YPL090C) : 7
CSRE(1) AND GCN4(1) => SimExpr(YPR145W) OR SimExpr(other) : 5 2
EXPR: (0.223) GCN4 (P < 0.030) CSRE (P < 0.022)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| |YGL184C| |
STR3 |
methionine biosynthesis -> amine metabolism, sulfur metabolism, biosynthesis, amino acid and derivative metabolism, organic acid metabolism |
cystathionine beta-lyase activity -> cystathionine beta-lyase activity |
peroxisome -> cytoplasm |
INO4, MET31, MET4 |
| |YNL019C| |
NO SYMBOL |
|
|
|
|
| YLR355C |
ILV5 |
branched chain family amino acid biosynthesis, mitochondrial genome maintenance -> amine metabolism, cell organization and biogenesis, amino acid and derivative metabolism, organic acid metabolism, biosynthesis |
ketol-acid reductoisomerase activity -> ketol-acid reductoisomerase activity |
mitochondrion -> cytoplasm |
GCN4, MET4 |
| YPR145W |
ASN1 |
asparagine biosynthesis -> amine metabolism, amino acid and derivative metabolism, organic acid metabolism, biosynthesis |
asparagine synthase (glutamine-hydrolyzing) activity -> asparagine synthase (glutamine-hydrolyzing) activity |
|
DAL81, GCN4, GLN3, MET4, RAP1, SUM1 |
| YGL207W |
SPT16 |
chromatin modeling, regulation of global transcription from Pol II promoter, RNA elongation from Pol II promoter -> cell organization and biogenesis, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism, DNA metabolism |
transcriptional elongation regulator activity -> transcriptional elongation regulator activity |
alpha DNA polymerase\:primase complex, nuclear chromatin, transcription elongation factor complex -> nucleus, chromosome |
RTG1 |
| YNL098C |
RAS2 |
pseudohyphal growth, sporulation (sensu Saccharomyces), adenylate cyclase activation, RAS protein signal transduction -> cell organization and biogenesis, sporulation, signal transduction |
RAS small monomeric GTPase activity -> RAS small monomeric GTPase activity |
plasma membrane -> plasma membrane |
ACE2, SKN7 |
| YOL092W |
NO SYMBOL |
|
|
|
MAC1 |
| Main: |
|
cell organization and biogenesis (0.60) |
RAS small monomeric GTPase activity (0.20) |
cytoplasm (0.50) |
MET4 (0.50) |
| Score: |
|
0.60 |
0.00 |
0.17 |
0.200 |
| P-value: |
|
1.165E-02 (amino acid biosynthesis) |
1.628E+00 (enzyme activity) |
4.869E+00 (cytoplasm) |
1.489E-03 (MET4) |
CSRE(1) AND HAP234(1) => SimExpr(YPR145W) : 6
CSRE(1) AND MCB(1) => SimExpr(YMR076C) OR SimExpr(other) : 5 2
EXPR: (0.191) MCB (P < 0.121) CSRE (P < 0.000)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YDR309C |
GIC2 |
axial budding, Rho protein signal transduction, establishment of cell polarity (sensu Saccharomyces) -> axial budding, small GTPase mediated signal transduction, organelle organization and biogenesis |
small GTPase regulatory/interacting protein activity -> small GTPase regulatory/interacting protein activity |
actin cap (sensu Saccharomyces), bud tip, shmoo tip, incipient bud site -> cell cortex, site of polarized growth (sensu Fungi), incipient bud site, cytoplasm |
ASH1, HSF1, MBP1, PHD1, RLM1, SKN7, STB1, STE12, SWI4, SWI6 |
| |YJR006W| |
HYS2 |
leading strand elongation, lagging strand elongation, mutagenesis, base-excision repair, nucleotide-excision repair, postreplication repair, mismatch repair -> mutagenesis, DNA repair, postreplication repair, DNA replication and chromosome cycle, mitotic cell cycle, DNA metabolism |
delta DNA polymerase activity -> delta DNA polymerase activity |
delta DNA polymerase complex -> cytoplasm, nucleus |
ABF1 |
| YML027W |
YOX1 |
negative regulation of transcription from Pol II promoter\, mitotic, regulation of mitotic cell cycle -> mitotic cell cycle, M phase, regulation of transcription, nuclear division, transcription\, DNA-dependent, regulation of cell cycle |
specific transcriptional repressor activity, DNA binding -> specific transcriptional repressor activity, DNA binding |
nucleus -> nucleus |
MBP1, SWI4, SWI6 |
| YDR134C |
NO SYMBOL |
|
|
|
ASH1, NRG1, SOK2, SWI4 |
| |YMR279C| |
NO SYMBOL |
|
|
|
IXR1, MIG1, MTH1, RFX1, SWI4, SWI6 |
| YMR076C |
PDS5 |
mitotic sister chromatid cohesion, mitotic chromosome condensation -> DNA replication and chromosome cycle, M phase, mitotic cell cycle |
structural molecule activity -> structural molecule activity |
condensed nuclear chromosome -> chromosome, nucleus |
FKH2, MBP1, SWI6 |
| YHR110W |
ERP5 |
secretory pathway -> secretory pathway |
|
integral to membrane -> integral to membrane |
DOT6, RGT1 |
| Main: |
|
mitotic cell cycle (0.60) |
DNA binding (0.25) |
nucleus (0.60) |
SWI4 SWI6 (0.57) |
| Score: |
|
0.30 |
0.00 |
0.40 |
0.429 |
| P-value: |
|
1.664E-01 (mitotic cell cycle) |
2.000E+00 |
2.837E+00 (nucleus) |
5.504E-04 (SWI6) |
ALPHA1(1) AND MCB(1) => SimExpr(YMR076C) OR SimExpr(other) : 22 10
EXPR: (0.203) MCB (P < 0.055) ALPHA1 (P < 0.000)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YMR179W |
SPT21 |
regulation of transcription from Pol II promoter -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
|
|
MBP1, STB1, SWI4, SWI6, UGA3 |
| YML027W |
YOX1 |
negative regulation of transcription from Pol II promoter\, mitotic, regulation of mitotic cell cycle -> transcription, cell cycle |
specific transcriptional repressor activity, DNA binding -> specific transcriptional repressor activity, DNA binding |
nucleus -> intracellular |
MBP1, SWI4, SWI6 |
| |YPR185W| |
APG13 |
protein-vacuolar targeting, autophagy -> cell organization and biogenesis, autophagy, protein metabolism, transport |
protein binding -> protein binding |
extrinsic to membrane -> extrinsic to membrane |
MET4, SWI6 |
| YDL003W |
MCD1 |
mitotic sister chromatid cohesion, mitotic chromosome condensation -> cell proliferation, cell cycle |
|
nuclear cohesin complex -> intracellular |
CIN5, MBP1, SWI6 |
| |YMR125W| |
STO1 |
mRNA splicing -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
mRNA binding -> RNA binding |
commitment complex, snRNA cap binding complex -> intracellular |
ABF1, FZF1, HAP3, MET31, RTG1, SRD1, SUM1, YAP6, ZAP1 |
| YGR189C |
CRH1 |
|
|
cell wall, incipient bud site -> cell wall, intracellular |
GRF10(Pho2), MBP1, RLM1, STE12, SWI4, SWI5 |
| |YJR030C| |
NO SYMBOL |
|
|
|
MBP1, PHO4, RTG1, SWI6 |
| YNL233W |
BNI4 |
cytokinesis -> cell proliferation |
protein binding -> protein binding |
contractile ring (sensu Saccharomyces) -> site of polarized growth (sensu Fungi), intracellular |
PHO4 |
| YGR109C |
CLB6 |
regulation of CDK activity, G1/S transition of mitotic cell cycle, premeiotic DNA synthesis -> cell proliferation, cell cycle, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
cyclin-dependent protein kinase\, regulator activity -> transferase activity\, transferring phosphorus-containing groups, protein kinase regulator activity |
|
MBP1, STB1, SWI4, SWI6 |
| |YMR102C| |
NO SYMBOL |
|
|
|
|
| YPR135W |
CTF4 |
DNA dependent DNA replication, DNA repair -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism, cell proliferation |
DNA binding -> DNA binding |
nucleus -> intracellular |
BAS1, DIG1, FZF1 |
| YNL077W |
APJ1 |
|
chaperone activity -> chaperone activity |
|
HSF1, MSN4 |
| YNL039W |
BDP1 |
transcription initiation from Pol III promoter -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
RNA polymerase III transcription factor activity -> RNA polymerase III transcription factor activity |
transcription factor TFIIIB complex -> intracellular |
|
| YMR076C |
PDS5 |
mitotic sister chromatid cohesion, mitotic chromosome condensation -> cell proliferation, cell cycle |
structural molecule activity -> structural molecule activity |
condensed nuclear chromosome -> intracellular |
FKH2, MBP1, SWI6 |
| |YJL095W| |
BCK1 |
protein amino acid phosphorylation, protein kinase cascade, response to nutrients, establishment of cell polarity (sensu Saccharomyces) -> phosphorus metabolism, signal transduction, response to extracellular stimulus, cell organization and biogenesis, protein metabolism, response to abiotic stimulus |
MAP kinase kinase kinase activity -> transferase activity\, transferring phosphorus-containing groups |
intracellular -> intracellular |
YAP1 |
| YFR027W |
ECO1 |
sister chromatid cohesion, DNA replication, DNA repair -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism, cell proliferation |
acetyltransferase activity -> transferase activity\, transferring acyl groups |
nuclear chromatin -> intracellular |
|
| YNL102W |
POL1 |
DNA replication\, priming, DNA replication initiation, lagging strand elongation, DNA repair synthesis -> DNA metabolism, cell proliferation |
alpha DNA polymerase activity -> transferase activity\, transferring phosphorus-containing groups |
alpha DNA polymerase\:primase complex -> intracellular |
LEU3, MBP1 |
| |YGR085C| |
RPL11B |
protein biosynthesis, ribosomal large subunit assembly and maintenance -> biosynthesis, cell organization and biogenesis, protein metabolism |
structural constituent of ribosome -> structural molecule activity |
cytosolic large ribosomal subunit (sensu Eukarya) -> intracellular |
FHL1, MIG1 |
| YLR313C |
SPH1 |
actin filament organization, polar budding, pseudohyphal growth, Rho protein signal transduction, establishment of cell polarity (sensu Saccharomyces) -> asexual reproduction, signal transduction, cell organization and biogenesis |
cytoskeletal regulatory protein binding -> protein binding |
polarisome, actin cap (sensu Saccharomyces), shmoo tip -> site of polarized growth (sensu Fungi), site of polarized growth (sensu Saccharomyces), intracellular |
GCR1, RPH1 |
| YML012W |
ERV25 |
ER to Golgi transport -> transport, vesicle-mediated transport |
|
COPII-coated vesicle -> intracellular |
ABF1 |
| YDR097C |
MSH6 |
mismatch repair -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism, cell proliferation |
ATPase activity, ATP binding, DNA binding -> purine nucleotide binding, DNA binding, hydrolase activity\, acting on acid anhydrides |
nucleus -> intracellular |
DOT6, MBP1, SWI6 |
| |YOL006C| |
TOP1 |
negative regulation of recombination within rDNA repeats, DNA topological change, DNA strand elongation, chromatin assembly/disassembly, regulation of transcription from Pol II promoter, RNA elongation from Pol II promoter, mitotic chromosome condensation, nuclear migration -> cell organization and biogenesis, cell cycle, mitotic cell cycle, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
DNA topoisomerase type I activity -> other isomerase activity |
nucleus -> intracellular |
REB1 |
| |YPL140C| |
MKK2 |
protein amino acid phosphorylation, signal transduction -> phosphorus metabolism, signal transduction, protein metabolism |
MAP kinase kinase activity -> transferase activity\, transferring phosphorus-containing groups |
intracellular -> intracellular |
FKH1, FKH2 |
| YKR077W |
NO SYMBOL |
|
|
|
|
| YOR284W |
HUA2 |
|
|
|
RFX1, YAP6 |
| |YLR430W| |
SEN1 |
35S primary transcript processing -> cell organization and biogenesis, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
ATP dependent RNA helicase activity -> RNA binding, purine nucleotide binding, hydrolase activity\, acting on acid anhydrides |
nucleolus -> intracellular |
ARG80, GTS1, HAP5, RTG3, SIP4 |
| |YNR028W| |
CPR8 |
|
peptidyl-prolyl cis-trans isomerase activity -> cis-trans isomerase activity |
|
ASH1, DIG1, MCM1 |
| YOR144C |
ELG1 |
negative regulation of DNA transposition, negative regulation of DNA recombination -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
|
|
YJL206C |
| YDR134C |
NO SYMBOL |
|
|
|
ASH1, NRG1, SOK2, SWI4 |
| YGL225W |
VRG4 |
nucleotide-sugar transport, N-linked glycosylation, lipid glycosylation -> transport, biosynthesis, lipid metabolism, protein metabolism |
nucleotide-sugar transporter activity -> nucleotide-sugar transporter activity |
Golgi apparatus -> intracellular |
|
| YNL206C |
RTT106 |
negative regulation of DNA transposition -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
|
|
MSS11, SIP4, SUM1 |
| YNL082W |
PMS1 |
mismatch repair, meiosis -> DNA metabolism, cell proliferation |
ATPase activity, ATP binding, DNA binding -> purine nucleotide binding, DNA binding, hydrolase activity\, acting on acid anhydrides |
nuclear chromosome -> intracellular |
MTH1 |
| Main: |
|
nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism (0.46) |
DNA binding (0.19) |
intracellular (0.95) |
MBP1 (0.33) |
| Score: |
|
0.42 |
0.09 |
0.90 |
0.162 |
| P-value: |
|
1.223E-03 (DNA replication) |
2.092E+00 (isomerase activity) |
5.299E-01 (chromosome) |
1.349E-05 (MBP1) |
CSRE(1) AND ALPHA1(1) AND SFF'(1) AND CCA(1) => SimExpr(YMR008C) OR SimExpr(other) : 5 2
mRRPE(1) AND Leu3(1) => SimExpr(YLR355C) OR SimExpr(other) : 5 1
EXPR: (0.179) mRRPE (P < 0.004) Leu3 (P < 0.026)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YLR355C |
ILV5 |
branched chain family amino acid biosynthesis, mitochondrial genome maintenance -> amine metabolism, cell organization and biogenesis, amino acid and derivative metabolism, organic acid metabolism, biosynthesis |
ketol-acid reductoisomerase activity -> oxidoreductase activity\, acting on the CH-OH group of donors\, NAD or NADP as acceptor |
mitochondrion -> cytoplasm |
GCN4, MET4 |
| YJR016C |
ILV3 |
branched chain family amino acid biosynthesis -> amine metabolism, amino acid and derivative metabolism, organic acid metabolism, biosynthesis |
dihydroxy-acid dehydratase activity -> hydro-lyase activity |
mitochondrion -> cytoplasm |
|
| YKL029C |
MAE1 |
pyruvate metabolism, amino acid metabolism -> amine metabolism, organic acid metabolism, amino acid and derivative metabolism |
malate dehydrogenase (oxaloacetate decarboxylating) activity -> malate dehydrogenase activity, oxidoreductase activity\, acting on the CH-OH group of donors\, NAD or NADP as acceptor |
mitochondrion -> cytoplasm |
ABF1, CIN5 |
| YKR071C |
DRE2 |
|
|
|
CAD1, HSF1, YAP1, YAP3 |
| YPR074C |
TKL1 |
pentose-phosphate shunt -> coenzymes and prosthetic group metabolism, alcohol metabolism, water-soluble vitamin metabolism, carbohydrate metabolism, energy derivation by oxidation of organic compounds, catabolism |
transketolase activity -> transketolase and transaldolase activity |
cytoplasm -> cytoplasm |
REB1 |
| |YDR043C| |
NRG1 |
response to pH, glucose metabolism, regulation of transcription from Pol II promoter, invasive growth -> cell homeostasis, alcohol metabolism, cell organization and biogenesis, response to abiotic stimulus, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism, carbohydrate metabolism |
transcriptional repressor activity, DNA binding -> transcriptional repressor activity, DNA binding |
nucleus -> nucleus |
NRG1, SKN7 |
| Main: |
|
amino acid and derivative metabolism (0.60) |
oxidoreductase activity\, acting on the CH-OH group of donors\, NAD or NADP as acceptor (0.40) |
cytoplasm (0.80) |
YAP1 (0.20) |
| Score: |
|
0.50 |
0.10 |
0.60 |
0.000 |
| P-value: |
|
7.579E-03 (branched chain family amino acid biosynthesis) |
4.606E-02 (oxidoreductase activity\, acting on the CH-OH group of donors\, NAD or NADP as acceptor) |
1.995E-01 (mitochondrion) |
1.412E-01 (YAP3) |
CSRE(1) AND RAP1(1) => SimExpr(YDR450W) OR SimExpr(other) : 12 2
CSRE(1) AND RAP1(1) AND MCM1'(1) => SimExpr(YDR450W) : 9
ALPHA1(1) AND PDR(1) AND ATRepeat(1) => SimExpr(YOR153W) OR SimExpr(other) : 6 2
EXPR: (0.193) PDR (P < 0.001) ATRepeat (P < 0.000) ALPHA1 (P < 0.000)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| |YGL062W| |
PYC1 |
NADPH regeneration, gluconeogenesis -> coenzymes and prosthetic group metabolism, alcohol metabolism, carbohydrate metabolism, vitamin metabolism, biosynthesis, energy pathways |
pyruvate carboxylase activity -> pyruvate carboxylase activity |
cytosol -> cytoplasm |
DIG1, GCR1, STE12 |
| YOR273C |
TPO4 |
polyamine transport -> transport |
spermine transporter activity, spermidine transporter activity -> spermine transporter activity, spermidine transporter activity |
plasma membrane, vacuolar membrane -> plasma membrane, cytoplasm |
ARO80, BAS1, FZF1, HIR1, IME4, NRG1, PDR1, PHO4, SFP1, SKN7, STP1 |
| YOR153W |
PDR5 |
drug transport, response to drug -> transport, response to abiotic stimulus |
xenobiotic-transporting ATPase activity -> xenobiotic-transporting ATPase activity |
plasma membrane -> plasma membrane |
YAP6 |
| |YGL057C| |
NO SYMBOL |
|
|
|
|
| YGL197W |
MDS3 |
sporulation -> sporulation |
|
cytoplasm -> cytoplasm |
MTH1 |
| YKL141W |
SDH3 |
oxidative phosphorylation\, succinate to ubiquinone, tricarboxylic acid cycle -> electron transport, carbohydrate metabolism, phosphorus metabolism, energy pathways |
succinate dehydrogenase activity -> succinate dehydrogenase activity |
respiratory chain complex II (sensu Eukarya) -> cytoplasm, respiratory chain complex II, succinate dehydrogenase complex (ubiquinone), inner membrane |
|
| YNL231C |
PDR16 |
phospholipid transport, sterol biosynthesis, response to drug -> transport, alcohol metabolism, response to abiotic stimulus, biosynthesis, lipid metabolism |
phosphatidylinositol transporter activity -> phosphatidylinositol transporter activity |
cytoplasm -> cytoplasm |
HSF1, MBP1, SWI4, YAP1 |
| YGR281W |
YOR1 |
transport, response to drug -> transport, response to abiotic stimulus |
xenobiotic-transporting ATPase activity -> xenobiotic-transporting ATPase activity |
plasma membrane -> plasma membrane |
|
| Main: |
|
transport (0.57) |
xenobiotic-transporting ATPase activity (0.33) |
cytoplasm (0.71) |
YAP1 (0.20) |
| Score: |
|
0.38 |
0.07 |
0.62 |
0.000 |
| P-value: |
|
2.468E-04 (response to drug) |
4.681E-03 (xenobiotic-transporting ATPase activity) |
8.119E-02 (plasma membrane) |
1.000E+00 |
ALPHA1(1) AND MCB(1) => SimExpr(YML027W) OR SimExpr(other) : 22 10
ALPHA1(1) AND MCB(1) AND MCM1'(1) => SimExpr(YML027W) OR SimExpr(other) : 7 3
EXPR: (0.215) MCB (P < 0.253) MCM1' (P < 0.000) ALPHA1 (P < 0.000)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YML027W |
YOX1 |
negative regulation of transcription from Pol II promoter\, mitotic, regulation of mitotic cell cycle -> mitotic cell cycle, M phase, regulation of transcription, nuclear division, transcription\, DNA-dependent, regulation of cell cycle |
specific transcriptional repressor activity, DNA binding -> specific transcriptional repressor activity, DNA binding |
nucleus -> nucleus |
MBP1, SWI4, SWI6 |
| YGR189C |
CRH1 |
|
|
cell wall, incipient bud site -> cell wall, incipient bud site |
GRF10(Pho2), MBP1, RLM1, STE12, SWI4, SWI5 |
| YGR109C |
CLB6 |
regulation of CDK activity, G1/S transition of mitotic cell cycle, premeiotic DNA synthesis -> DNA replication and chromosome cycle, regulation of cell cycle, mitotic cell cycle, DNA metabolism |
cyclin-dependent protein kinase\, regulator activity -> cyclin-dependent protein kinase\, regulator activity |
|
MBP1, STB1, SWI4, SWI6 |
| |YMR102C| |
NO SYMBOL |
|
|
|
|
| YPR135W |
CTF4 |
DNA dependent DNA replication, DNA repair -> DNA replication and chromosome cycle, DNA repair, mitotic cell cycle, DNA metabolism |
DNA binding -> DNA binding |
nucleus -> nucleus |
BAS1, DIG1, FZF1 |
| |YGR085C| |
RPL11B |
protein biosynthesis, ribosomal large subunit assembly and maintenance -> protein biosynthesis, ribosome biogenesis and assembly |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, MIG1 |
| |YNR028W| |
CPR8 |
|
peptidyl-prolyl cis-trans isomerase activity -> peptidyl-prolyl cis-trans isomerase activity |
|
ASH1, DIG1, MCM1 |
| YDR134C |
NO SYMBOL |
|
|
|
ASH1, NRG1, SOK2, SWI4 |
| YGL225W |
VRG4 |
nucleotide-sugar transport, N-linked glycosylation, lipid glycosylation -> nucleotide-sugar transport, protein biosynthesis, lipid glycosylation, protein modification, glycoprotein metabolism |
nucleotide-sugar transporter activity -> nucleotide-sugar transporter activity |
Golgi apparatus -> cytoplasm |
|
| YNL082W |
PMS1 |
mismatch repair, meiosis -> DNA replication and chromosome cycle, M phase, DNA repair, mitotic cell cycle, DNA metabolism |
ATPase activity, ATP binding, DNA binding -> ATPase activity, ATP binding, DNA binding |
nuclear chromosome -> chromosome, nucleus |
MTH1 |
| Main: |
|
mitotic cell cycle (0.67) |
DNA binding (0.43) |
nucleus (0.50) |
SWI4 (0.50) |
| Score: |
|
0.47 |
0.14 |
0.27 |
0.286 |
| P-value: |
|
5.091E-02 (DNA replication) |
1.637E-01 (DNA binding) |
4.464E+00 (nucleus) |
9.947E-03 (SWI4) |
CSRE(1) AND MCB(1) => SimExpr(YML027W) OR SimExpr(other) : 5 2
MCM1(1) AND MCB(1) => SimExpr(YML027W) OR SimExpr(other) : 7 2
EXPR: (0.191) MCB (P < 0.080) MCM1 (P < 0.000)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YML027W |
YOX1 |
negative regulation of transcription from Pol II promoter\, mitotic, regulation of mitotic cell cycle -> regulation of transcription, M phase, transcription, cell cycle |
specific transcriptional repressor activity, DNA binding -> specific transcriptional repressor activity, DNA binding |
nucleus -> nucleus |
MBP1, SWI4, SWI6 |
| YGR189C |
CRH1 |
|
|
cell wall, incipient bud site -> cell wall, incipient bud site |
GRF10(Pho2), MBP1, RLM1, STE12, SWI4, SWI5 |
| YGL163C |
RAD54 |
double-strand break repair via synthesis-dependent strand annealing, heteroduplex formation, double-strand break repair via break-induced replication, telomerase-independent telomere maintenance, double-strand break repair via single-strand annealing, chromatin modeling -> mating-type switching/recombination, chromosome organization and biogenesis (sensu Eukarya), DNA repair, response to DNA damage, DNA metabolism |
DNA supercoiling activity, DNA dependent ATPase activity -> DNA binding, purine nucleotide binding, hydrolase activity\, acting on acid anhydrides |
nucleus -> nucleus |
|
| |YIL066C| |
RNR3 |
DNA replication -> cell cycle, DNA metabolism |
ribonucleoside-diphosphate reductase activity -> oxidoreductase activity\, acting on CH2 groups |
cytoplasm -> cytoplasm |
RFX1, STB1 |
| YGR109C |
CLB6 |
regulation of CDK activity, G1/S transition of mitotic cell cycle, premeiotic DNA synthesis -> cell cycle, mitotic cell cycle, DNA metabolism |
cyclin-dependent protein kinase\, regulator activity -> transferase activity\, transferring phosphorus-containing groups, protein kinase regulator activity |
|
MBP1, STB1, SWI4, SWI6 |
| YDR309C |
GIC2 |
axial budding, Rho protein signal transduction, establishment of cell polarity (sensu Saccharomyces) -> budding, intracellular signaling cascade, cytoplasm organization and biogenesis |
small GTPase regulatory/interacting protein activity -> small GTPase regulatory/interacting protein activity |
actin cap (sensu Saccharomyces), bud tip, shmoo tip, incipient bud site -> cell cortex, site of polarized growth (sensu Fungi), incipient bud site, cytoplasm |
ASH1, HSF1, MBP1, PHD1, RLM1, SKN7, STB1, STE12, SWI4, SWI6 |
| YKR077W |
NO SYMBOL |
|
|
|
|
| |YNR028W| |
CPR8 |
|
peptidyl-prolyl cis-trans isomerase activity -> cis-trans isomerase activity |
|
ASH1, DIG1, MCM1 |
| YDR279W |
RNH202 |
|
|
|
GCR2, MBP1, RIM101, RLM1, SWI6, THI2 |
| Main: |
|
DNA metabolism (0.60) |
DNA binding (0.33) |
cytoplasm (0.40) |
MBP1 (0.71) |
| Score: |
|
0.50 |
0.07 |
0.30 |
0.619 |
| P-value: |
|
4.056E-01 (mitotic cell cycle) |
7.505E-01 (DNA binding) |
5.771E-03 (incipient bud site) |
5.451E-05 (MBP1) |
RAP1(1) AND MCM1'(1) => SimExpr(YKL152C) OR SimExpr(other) : 18 2
CSRE(1) AND RAP1(1) => SimExpr(YKL152C) OR SimExpr(other) : 12 2
CSRE(1) AND RAP1(1) AND MCM1'(1) => SimExpr(YKL152C) : 9
RAP1(1) AND ALPHA1(1) AND MCM1'(1) => SimExpr(YKL152C) : 9
CSRE(1) AND RAP1(1) => SimExpr(YGR214W) OR SimExpr(other) : 12 2
RAP1(1) AND MCM1'(1) => SimExpr(YGR214W) OR SimExpr(other) : 18 2
CSRE(1) AND RAP1(1) AND MCM1'(1) => SimExpr(YGR214W) : 9
RAP1(1) AND ALPHA1'(1) AND MCM1'(1) => SimExpr(YGR214W) : 7
HAP234(1) AND MCM1'(1) => SimExpr(YNL069C) OR SimExpr(other) : 9 4
EXPR: (0.212) MCM1' (P < 0.000) HAP234 (P < 0.074)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YDL181W |
INH1 |
ATP synthesis coupled proton transport -> transport |
|
proton-transporting ATP synthase complex (sensu Eukarya) -> cytoplasm, proton-transporting ATP synthase complex, integral to membrane, inner membrane |
HAP4 |
| YLR304C |
ACO1 |
tricarboxylic acid cycle, citrate metabolism, glutamate biosynthesis, propionate metabolism -> carbohydrate metabolism, amine metabolism, organic acid metabolism, energy pathways, amino acid and derivative metabolism, biosynthesis |
aconitate hydratase activity -> carbon-oxygen lyase activity |
cytosol, mitochondrial matrix -> cytoplasm |
CIN5, YAP6 |
| YNL069C |
RPL16B |
protein biosynthesis -> biosynthesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, PDR1, RAP1, RGM1, YAP5 |
| |YPL177C| |
CUP9 |
copper ion homeostasis, transcription initiation from Pol II promoter -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism, cell homeostasis, transcription |
specific RNA polymerase II transcription factor activity -> specific RNA polymerase II transcription factor activity |
nucleus -> nucleus |
BAS1, CIN5, MAC1, PHD1, SWI4, YAP6 |
| |YJL079C| |
PRY1 |
|
|
nuclear membrane, endoplasmic reticulum -> nucleus, cytoplasm, endomembrane system |
NDD1, PHD1, RAP1 |
| YDL137W |
ARF2 |
ER to Golgi transport, intra-Golgi transport -> transport, vesicle-mediated transport |
ARF small monomeric GTPase activity -> purine nucleotide binding, hydrolase activity\, acting on acid anhydrides |
Golgi vesicle, cytosol -> cytoplasm, Golgi apparatus |
MSS11, REB1, RGT1, SIG1, SKN7, SOK2 |
| YMR143W |
RPS16A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> eukaryotic 48S initiation complex, cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, RAP1, RGM1, YAP5 |
| YPR035W |
GLN1 |
nitrogen metabolism, glutamine biosynthesis -> nitrogen metabolism, amine metabolism, amino acid and derivative metabolism, organic acid metabolism, biosynthesis |
glutamate-ammonia ligase activity -> ligase activity\, forming carbon-nitrogen bonds |
cytoplasm -> cytoplasm |
CIN5, DAL81, FKH1, FKH2, GLN3, HSF1, INO4, MSN1, REB1, SWI4 |
| |YNL040W| |
NO SYMBOL |
|
|
|
FZF1, GCR2, RTG3, YAP7 |
| |YKL198C| |
PTK1 |
polyamine transport -> transport |
protein kinase activity -> transferase activity\, transferring phosphorus-containing groups |
|
INO2 |
| YDR377W |
ATP17 |
ATP synthesis coupled proton transport -> transport |
hydrogen-transporting ATP synthase activity -> cation transporter activity |
proton-transporting ATP synthase complex\, coupling factor F(o) (sensu Eukarya) -> cytoplasm, proton-transporting ATP synthase complex, integral to membrane, inner membrane |
ARO80, HAP2, HAP3, HAP4, RPH1 |
| YFR033C |
QCR6 |
aerobic respiration, oxidative phosphorylation\, ubiquinone to cytochrome c -> energy pathways, electron transport, phosphorus metabolism |
ubiquinol-cytochrome c reductase activity -> oxidoreductase activity\, acting on diphenols and related substances as donors, primary active transporter activity, cation transporter activity |
mitochondrion, respiratory chain complex III (sensu Eukarya) -> cytoplasm, respiratory chain complex III, inner membrane |
HAP4, MBP1 |
| YDL140C |
RPO21 |
transcription from Pol II promoter -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
DNA-directed RNA polymerase activity -> transferase activity\, transferring phosphorus-containing groups |
DNA-directed RNA polymerase II\, core complex -> nucleus |
REB1 |
| Main: |
|
biosynthesis (0.36) |
structural constituent of ribosome (0.20) |
cytoplasm (0.82) |
REB1 HAP4 RAP1 CIN5 (0.23) |
| Score: |
|
0.25 |
0.07 |
0.71 |
0.167 |
| P-value: |
|
4.375E-02 (ATP synthesis coupled proton transport) |
1.008E-01 (hydrogen ion transporter activity) |
3.537E-02 (proton-transporting ATP synthase complex) |
2.498E-02 (HAP4) |
CSRE(1) AND RAP1(1) => SimExpr(YNL069C) OR SimExpr(other) : 12 2
CSRE(1) AND HAP234(1) => SimExpr(YNL069C) : 6
CSRE(1) AND RAP1(1) AND MCM1'(1) => SimExpr(YNL069C) : 9
RAP1(1) AND MCM1'(1) => SimExpr(YLR344W) OR SimExpr(other) : 19 1
RAP1(1) AND SWI5(1) => SimExpr(YLR344W) OR SimExpr(other) : 16 7
EXPR: (0.218) SWI5 (P < 0.000) RAP1 (P < 0.150)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| |YNL311C| |
NO SYMBOL |
|
|
|
GCN4, RAP1 |
| |YMR224C| |
MRE11 |
DNA repair, double-strand break repair via nonhomologous end-joining, meiotic DNA double-strand break formation, meiotic DNA double-strand break processing, double-strand break repair via break-induced replication -> DNA metabolism, cell proliferation, catabolism |
endonuclease activity, 3'-5' exonuclease activity, protein binding -> nuclease activity, protein binding |
nucleus -> nucleus |
RAP1 |
| YLR452C |
SST2 |
signal transduction, adaptation to pheromone during conjugation with cellular fusion -> signal transduction, conjugation, perception of external stimulus, sexual reproduction, response to abiotic stimulus |
GTPase activator activity -> GTPase activator activity |
plasma membrane -> membrane |
DIG1, FHL1, RAP1, STE12 |
| YNL069C |
RPL16B |
protein biosynthesis -> biosynthesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, PDR1, RAP1, RGM1, YAP5 |
| YJR145C |
RPS4A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya), cytoplasm -> eukaryotic 48S initiation complex, cytoplasm, ribonucleoprotein complex |
ACE2, CIN5, FHL1, INO4, MTH1, RAP1, YAP6 |
| YGL030W |
RPL30 |
protein biosynthesis, rRNA processing, mRNA splicing, regulation of translation -> cell organization and biogenesis, biosynthesis, transcription, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya), cytoplasm -> cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, RAP1, SFP1 |
| |YGL196W| |
NO SYMBOL |
|
|
|
|
| YDR450W |
RPS18A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> eukaryotic 48S initiation complex, cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, HIR2, RAP1, RGM1, YAP5 |
| |YJL217W| |
NO SYMBOL |
|
|
|
CIN5, MAC1, PHD1, SWI5, YAP6 |
| YMR194W |
RPL36A |
protein biosynthesis -> biosynthesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
ARG80, ARO80, BAS1, CUP9, FHL1, HAL9, HAP4, HAP5, HMS1, MET31, NRG1, RAP1, RCS1, RME1, STP2 |
| YLR441C |
RPS1A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> eukaryotic 48S initiation complex, cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, RAP1, YAP5 |
| YPR080W |
TEF1 |
translational elongation -> biosynthesis, protein metabolism |
translation elongation factor activity -> translation elongation factor activity |
ribosome -> cytoplasm, ribonucleoprotein complex |
FHL1, PDR1, RAP1, YAP5 |
| YOR312C |
RPL20B |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, FKH2, GAT3, RAP1 |
| YLR249W |
YEF3 |
translational elongation -> biosynthesis, protein metabolism |
translation elongation factor activity -> translation elongation factor activity |
ribosome -> cytoplasm, ribonucleoprotein complex |
INO2, INO4 |
| |YKR092C| |
SRP40 |
nucleocytoplasmic transport -> transport |
chaperone activity -> chaperone activity |
nucleolus -> nucleus |
CUP9, MET4, RAP1 |
| YKL006W |
RPL14A |
protein biosynthesis -> biosynthesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, GRF10(Pho2), GTS1, RAP1 |
| |YPR161C| |
SGV1 |
transcription, protein amino acid phosphorylation -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism, phosphorus metabolism, protein metabolism |
cyclin-dependent protein kinase activity -> phosphotransferase activity\, alcohol group as acceptor |
nucleus -> nucleus |
RAP1 |
| |YOR213C| |
SAS5 |
chromatin silencing at telomere -> cell organization and biogenesis, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism, transcription |
acetyltransferase activity -> transferase activity\, transferring groups other than amino-acyl groups |
nuclear chromosome\, telomeric region, nuclear chromatin -> chromosome, nuclear chromosome |
GRF10(Pho2), SUM1 |
| YOR369C |
RPS12 |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> eukaryotic 48S initiation complex, cytoplasm, ribonucleoprotein complex |
ARG80, FHL1, FKH2, LEU3, NDD1, PDR1, RME1, SMP1, YAP6 |
| YMR013C |
SEC59 |
protein-ER targeting, protein amino acid glycosylation -> cell organization and biogenesis, biosynthesis, protein modification, protein metabolism, transport |
dolichol kinase activity -> phosphotransferase activity\, alcohol group as acceptor |
membrane -> membrane |
FHL1, NDD1, RAP1, RLM1, RME1 |
| YGL115W |
SNF4 |
regulation of transcription from Pol II promoter, peroxisome organization and biogenesis -> cell organization and biogenesis, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
protein kinase activator activity -> protein kinase activator activity |
plasma membrane, nucleus, cytoplasm -> membrane, nucleus, cytoplasm |
BAS1, CAD1, MAC1, NRG1, PDR1, RAP1, SMP1, YAP5 |
| YOL120C |
RPL18A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, MAL13, RAP1, YAP5 |
| YLR344W |
RPL26A |
protein biosynthesis -> biosynthesis, protein metabolism |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, RAP1 |
| Main: |
|
protein metabolism (0.75) |
structural constituent of ribosome (0.55) |
cytoplasm (0.70) |
RAP1 (0.82) |
| Score: |
|
0.59 |
0.30 |
0.53 |
0.745 |
| P-value: |
|
3.851E-07 (protein biosynthesis) |
3.734E-07 (structural constituent of ribosome) |
1.306E-08 (cytosolic ribosome (sensu Eukarya)) |
4.765E-17 (RAP1) |
CSRE(1) AND RAP1(1) => SimExpr(YLR344W) OR SimExpr(other) : 12 2
RAP1(1) AND SWI5(1) AND SCB(1) => SimExpr(YLR344W) : 5
EXPR: (0.146) SWI5 (P < 0.000) SCB (P < 0.000) RAP1 (P < 0.003)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YMR194W |
RPL36A |
protein biosynthesis -> protein biosynthesis |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
ARG80, ARO80, BAS1, CUP9, FHL1, HAL9, HAP4, HAP5, HMS1, MET31, NRG1, RAP1, RCS1, RME1, STP2 |
| YPR080W |
TEF1 |
translational elongation -> protein biosynthesis |
translation elongation factor activity -> translation elongation factor activity |
ribosome -> ribosome |
FHL1, PDR1, RAP1, YAP5 |
| YLR249W |
YEF3 |
translational elongation -> protein biosynthesis |
translation elongation factor activity -> translation elongation factor activity |
ribosome -> ribosome |
INO2, INO4 |
| YOR369C |
RPS12 |
protein biosynthesis -> protein biosynthesis |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> cytosol, eukaryotic 43S pre-initiation complex, eukaryotic 48S initiation complex, ribosome |
ARG80, FHL1, FKH2, LEU3, NDD1, PDR1, RME1, SMP1, YAP6 |
| YLR344W |
RPL26A |
protein biosynthesis -> protein biosynthesis |
RNA binding, structural constituent of ribosome -> RNA binding, structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytosol, ribosome |
FHL1, RAP1 |
| Main: |
|
protein biosynthesis (1.00) |
structural constituent of ribosome (0.60) |
ribosome (1.00) |
FHL1 (0.80) |
| Score: |
|
1.00 |
0.40 |
1.00 |
0.600 |
| P-value: |
|
1.836E-04 (protein biosynthesis) |
1.741E-03 (translation elongation factor activity) |
3.393E-05 (ribosome) |
9.347E-05 (FHL1) |
RAP1(1) AND SWI5(1) AND MCM1'(1) => SimExpr(YLR344W) : 7
RAP1(1) AND ALPHA1'(1) AND MCM1'(1) => SimExpr(YLR344W) : 7
CSRE(1) AND RAP1(1) AND MCM1'(1) => SimExpr(YLR344W) : 9
SFF(1) AND mRRPE(1) AND ECB(1) => SimExpr(YML058W) OR SimExpr(other) : 7 2
EXPR: (0.220) SFF (P < 0.000) mRRPE (P < 0.000) ECB (P < 0.002)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YLR333C |
RPS25B |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> eukaryotic 48S initiation complex, cytoplasm, ribonucleoprotein complex |
FHL1, RAP1 |
| YOR315W |
NO SYMBOL |
|
|
|
ACE2, CIN5, CUP9, FKH2, IXR1, MCM1, NDD1, NRG1, RLM1, ROX1, SKN7, SUM1, SWI4, SWI6, YAP1, YAP6 |
| YDL140C |
RPO21 |
transcription from Pol II promoter -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
DNA-directed RNA polymerase activity -> nucleotidyltransferase activity |
DNA-directed RNA polymerase II\, core complex -> nucleus |
REB1 |
| YNR053C |
NOG2 |
mRNA splicing -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
GTPase activity -> guanyl nucleotide binding, hydrolase activity\, acting on acid anhydrides\, in phosphorus-containing anhydrides |
nucleus, nucleolus, nucleoplasm -> nucleus, nucleoplasm |
ABF1, AZF1 |
| YLR328W |
NMA1 |
nicotinamide adenine dinucleotide metabolism -> coenzymes and prosthetic group metabolism, vitamin metabolism |
nicotinamide-nucleotide adenylyltransferase activity -> nucleotidyltransferase activity |
|
CIN5, MSN1, ROX1 |
| |YOR066W| |
NO SYMBOL |
|
|
|
MBP1, MCM1 |
| |YPL128C| |
TBF1 |
loss of chromatin silencing -> cell organization and biogenesis, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism, transcription |
DNA binding, transcription factor activity -> DNA binding, transcription factor activity |
nuclear chromosome\, telomeric region, nuclear chromosome, nucleus -> chromosome, nucleus |
|
| YML058W |
SML1 |
response to DNA damage, mitochondrion organization and biogenesis -> response to biotic stimulus, cell organization and biogenesis |
enzyme inhibitor activity -> enzyme inhibitor activity |
|
NDD1, RFX1, SWI6 |
| YJL159W |
HSP150 |
cell wall organization and biogenesis -> cell organization and biogenesis |
structural constituent of cell wall -> structural constituent of cell wall |
cell wall -> cell wall |
ACE2, HIR2, MCM1, RLM1, SWI5 |
| Main: |
|
cell organization and biogenesis (0.43) |
nucleotidyltransferase activity (0.29) |
nucleus (0.60) |
MCM1 (0.38) |
| Score: |
|
0.29 |
0.05 |
0.30 |
0.179 |
| P-value: |
|
2.826E+00 (transcription\, DNA-dependent) |
8.582E-02 (nucleotidyltransferase activity) |
7.322E-01 (nucleoplasm) |
7.098E-02 (MCM1) |
ALPHA1'(1) AND SFF(1) AND mRRPE(1) AND ECB(1) => SimExpr(YML058W) : 6
EXPR: (0.182) ALPHA1' (P < 0.000) SFF (P < 0.000) mRRPE (P < 0.000) ECB (P < 0.000)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YLR333C |
RPS25B |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> cytosolic small ribosomal subunit (sensu Eukarya) |
FHL1, RAP1 |
| YOR315W |
NO SYMBOL |
|
|
|
ACE2, CIN5, CUP9, FKH2, IXR1, MCM1, NDD1, NRG1, RLM1, ROX1, SKN7, SUM1, SWI4, SWI6, YAP1, YAP6 |
| YNR053C |
NOG2 |
mRNA splicing -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
GTPase activity -> GTPase activity |
nucleus, nucleolus, nucleoplasm -> nucleus, nucleolus, nucleoplasm |
ABF1, AZF1 |
| YLR328W |
NMA1 |
nicotinamide adenine dinucleotide metabolism -> coenzymes and prosthetic group metabolism, vitamin metabolism |
nicotinamide-nucleotide adenylyltransferase activity -> nicotinamide-nucleotide adenylyltransferase activity |
|
CIN5, MSN1, ROX1 |
| YML058W |
SML1 |
response to DNA damage, mitochondrion organization and biogenesis -> response to biotic stimulus, cell organization and biogenesis |
enzyme inhibitor activity -> enzyme inhibitor activity |
|
NDD1, RFX1, SWI6 |
| YJL159W |
HSP150 |
cell wall organization and biogenesis -> cell organization and biogenesis |
structural constituent of cell wall -> structural constituent of cell wall |
cell wall -> cell wall |
ACE2, HIR2, MCM1, RLM1, SWI5 |
| Main: |
|
cell organization and biogenesis (0.40) |
structural constituent of cell wall (0.20) |
nucleolus (0.33) |
RLM1 ACE2 SWI6 CIN5 NDD1 ROX1 MCM1 (0.33) |
| Score: |
|
0.10 |
0.00 |
0.00 |
0.200 |
| P-value: |
|
3.811E+00 (cell organization and biogenesis) |
5.051E-01 (structural molecule activity) |
3.999E+00 (intracellular) |
6.777E-02 (ACE2) |
BAS1(1) AND MCB(1) => SimExpr(YGR109C) OR SimExpr(other) : 5 1
EXPR: (0.169) BAS1 (P < 0.000) MCB (P < 0.034)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| |YIL066C| |
RNR3 |
DNA replication -> cell proliferation, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
ribonucleoside-diphosphate reductase activity -> ribonucleoside-diphosphate reductase activity |
cytoplasm -> cytoplasm |
RFX1, STB1 |
| YGR109C |
CLB6 |
regulation of CDK activity, G1/S transition of mitotic cell cycle, premeiotic DNA synthesis -> cell proliferation, cell cycle, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
cyclin-dependent protein kinase\, regulator activity -> cyclin-dependent protein kinase\, regulator activity |
|
MBP1, STB1, SWI4, SWI6 |
| YJR154W |
NO SYMBOL |
|
|
|
CIN5, GCN4, RIM101 |
| YHR110W |
ERP5 |
secretory pathway -> transport |
|
integral to membrane -> integral to membrane |
DOT6, RGT1 |
| YJL181W |
NO SYMBOL |
|
|
|
|
| YPR185W |
APG13 |
protein-vacuolar targeting, autophagy -> cell organization and biogenesis, autophagy, protein metabolism, transport |
protein binding -> protein binding |
extrinsic to membrane -> extrinsic to membrane |
MET4, SWI6 |
| Main: |
|
cell proliferation (0.50) |
cyclin-dependent protein kinase\, regulator activity (0.33) |
extrinsic to membrane (0.33) |
SWI6 STB1 (0.40) |
| Score: |
|
0.33 |
0.00 |
0.00 |
0.200 |
| P-value: |
|
1.640E-01 (DNA replication) |
2.725E+00 (enzyme activity) |
1.666E+00 (membrane) |
2.568E-02 (STB1) |
MCM1(1) AND MCB(1) => SimExpr(YKR077W) OR SimExpr(other) : 6 3
SFF(1) AND mRRPE(1) AND MCB(1) => SimExpr(YDR279W) OR SimExpr(other) : 5 2
EXPR: (0.205) SFF (P < 0.000) mRRPE (P < 0.000) MCB (P < 0.038)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| |YOR033C| |
EXO1 |
mismatch repair -> DNA replication and chromosome cycle, DNA repair, mitotic cell cycle, DNA metabolism |
exonuclease activity, flap endonuclease activity, 5'-3' exonuclease activity -> DNA binding, nuclease activity |
nucleus -> nucleus |
RGT1 |
| YFR031C |
SMC2 |
mitotic chromosome condensation, mitotic chromosome segregation -> DNA replication and chromosome cycle, M phase of mitotic cell cycle, M phase |
DNA secondary structure binding, AT DNA binding, double-stranded DNA binding, ATPase activity -> DNA binding, double-stranded DNA binding, purine nucleotide binding, hydrolase activity\, acting on acid anhydrides |
nuclear condensin complex -> chromosome, nucleus |
INO2, MET4 |
| YMR279C |
NO SYMBOL |
|
|
|
IXR1, MIG1, MTH1, RFX1, SWI4, SWI6 |
| YNL102W |
POL1 |
DNA replication\, priming, DNA replication initiation, lagging strand elongation, DNA repair synthesis -> DNA replication and chromosome cycle, mitotic recombination, mitotic cell cycle, DNA metabolism, DNA repair |
alpha DNA polymerase activity -> transferase activity\, transferring phosphorus-containing groups |
alpha DNA polymerase\:primase complex -> nucleus |
LEU3, MBP1 |
| |YDR093W| |
DNF2 |
intracellular protein transport -> intracellular protein transport |
phospholipid-translocating ATPase activity -> phospholipid binding, purine nucleotide binding, primary active transporter activity, cation transporter activity, hydrolase activity\, acting on acid anhydrides |
plasma membrane -> plasma membrane |
GTS1 |
| YDR279W |
RNH202 |
|
|
|
GCR2, MBP1, RIM101, RLM1, SWI6, THI2 |
| YJR001W |
AVT1 |
neutral amino acid transport -> amine/polyamine transport, carboxylic acid transport |
neutral amino acid transporter activity -> carboxylic acid transporter activity |
vacuole -> cytoplasm |
CRZ1, GAT3, MATa1 |
| Main: |
|
DNA replication and chromosome cycle (0.60) |
DNA binding (0.40) |
nucleus (0.60) |
MBP1 SWI6 (0.29) |
| Score: |
|
0.30 |
0.20 |
0.30 |
0.095 |
| P-value: |
|
1.005E-01 (DNA replication and chromosome cycle) |
6.142E-01 (ATPase activity) |
2.364E+00 (nucleus) |
3.407E-01 (SWI6) |
MCM1(1) AND PDR(1) => SimExpr(YOR273C) OR SimExpr(other) : 8 3
EXPR: (0.234) PDR (P < 0.009) MCM1 (P < 0.014)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YOR273C |
TPO4 |
polyamine transport -> transport |
spermine transporter activity, spermidine transporter activity -> spermine transporter activity, spermidine transporter activity |
plasma membrane, vacuolar membrane -> plasma membrane, cytoplasm |
ARO80, BAS1, FZF1, HIR1, IME4, NRG1, PDR1, PHO4, SFP1, SKN7, STP1 |
| YLR304C |
ACO1 |
tricarboxylic acid cycle, citrate metabolism, glutamate biosynthesis, propionate metabolism -> carbohydrate metabolism, amine metabolism, organic acid metabolism, energy pathways, amino acid and derivative metabolism, biosynthesis |
aconitate hydratase activity -> aconitate hydratase activity |
cytosol, mitochondrial matrix -> cytoplasm |
CIN5, YAP6 |
| YKR042W |
UTH1 |
mitochondrion organization and biogenesis -> cell organization and biogenesis |
|
cell wall, mitochondrial outer membrane -> cell wall, cytoplasm, outer membrane |
ACE2, ASH1, DAL81, FKH2, HSF1, MCM1, NDD1, SKN7, STE12, SWI4 |
| |YFR022W| |
NO SYMBOL |
|
|
|
|
| YML116W |
ATR1 |
multidrug transport -> transport, response to abiotic stimulus |
multidrug efflux pump activity -> multidrug efflux pump activity |
plasma membrane -> plasma membrane |
CAD1, CIN5, FKH2, HSF1, PHD1, YAP1, YAP6 |
| YJL082W |
IML2 |
|
|
|
|
| YMR291W |
NO SYMBOL |
|
|
|
RAP1 |
| |YNL289W| |
PCL1 |
cell cycle -> cell proliferation |
cyclin-dependent protein kinase\, regulator activity -> cyclin-dependent protein kinase\, regulator activity |
cyclin-dependent protein kinase holoenzyme complex -> cyclin-dependent protein kinase holoenzyme complex |
ASH1, MBP1, MCM1, STB1, STE12, SWI4, SWI6 |
| YKL163W |
PIR3 |
cell wall organization and biogenesis -> cell organization and biogenesis |
structural constituent of cell wall -> structural constituent of cell wall |
cell wall -> cell wall |
MCM1, SMP1, SWI5 |
| |YOL011W| |
PLB3 |
phosphoinositide metabolism, phosphatidylserine catabolism -> catabolism, lipid metabolism |
lysophospholipase activity -> lysophospholipase activity |
extracellular space, plasma membrane -> extracellular space, plasma membrane |
SWI4 |
| YML058W |
SML1 |
response to DNA damage, mitochondrion organization and biogenesis -> response to biotic stimulus, cell organization and biogenesis |
enzyme inhibitor activity -> enzyme inhibitor activity |
|
NDD1, RFX1, SWI6 |
| Main: |
|
cell organization and biogenesis (0.38) |
structural constituent of cell wall (0.14) |
cytoplasm (0.43) |
SWI4 MCM1 (0.33) |
| Score: |
|
0.14 |
0.00 |
0.33 |
0.278 |
| P-value: |
|
3.512E-01 (mitochondrion organization and biogenesis) |
3.385E-01 (enzyme regulator activity) |
2.965E-01 (plasma membrane) |
1.558E-01 (ASH1) |
RAP1(1) AND MCM1'(1) => SimExpr(YGR085C) OR SimExpr(other) : 18 2
RAP1(1) AND ALPHA1(1) AND MCM1'(1) => SimExpr(YGR085C) : 9
HAP234(1) AND MCM1'(1) => SimExpr(YMR143W) OR SimExpr(other) : 9 4
RAP1(1) AND SWI5(1) AND SCB(1) => SimExpr(YMR194W) : 5
RAP1(1) AND MCM1'(1) => SimExpr(YMR142C) OR SimExpr(other) : 18 2
RAP1(1) AND ALPHA1(1) AND MCM1'(1) => SimExpr(YMR142C) : 9
RAP1(1) AND ALPHA1'(1) AND MCM1'(1) => SimExpr(YMR142C) : 7
RAP1(1) AND mRRPE(1) => SimExpr(YMR116C) OR SimExpr(other) : 7 3
RAP1(1) AND SWI5(1) AND SCB(1) => SimExpr(YOR369C) : 5
RAP1(1) AND mRRPE(1) => SimExpr(YDL130W) OR SimExpr(other) : 7 3
RAP1(1) AND MCM1'(1) => SimExpr(YDL130W) OR SimExpr(other) : 18 2
RAP1(1) AND ALPHA1'(1) AND MCM1'(1) => SimExpr(YDL130W) : 7
RAP1(1) AND ALPHA1(1) AND MCM1'(1) => SimExpr(YDL130W) : 9
RAP1(1) AND PDR(1) => SimExpr(YML026C) OR SimExpr(other) : 5 1
EXPR: (0.161) PDR (P < 0.000) RAP1 (P < 0.122)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YML026C |
RPS18B |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> eukaryotic 48S initiation complex, cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, RAP1, RGM1, SWI4, YAP5 |
| YLR441C |
RPS1A |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> eukaryotic 48S initiation complex, cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, RAP1, YAP5 |
| YGR254W |
ENO1 |
gluconeogenesis, glycolysis -> alcohol metabolism, carbohydrate biosynthesis, carbohydrate metabolism, energy derivation by oxidation of organic compounds, biosynthesis, catabolism |
phosphopyruvate hydratase activity -> phosphopyruvate hydratase activity |
phosphopyruvate hydratase complex, cytoplasm -> cytoplasm |
FKH2, MSN4, PDR1, SWI5, YAP5 |
| YPR080W |
TEF1 |
translational elongation -> biosynthesis, protein metabolism |
translation elongation factor activity -> translation elongation factor activity |
ribosome -> cytoplasm, ribonucleoprotein complex |
FHL1, PDR1, RAP1, YAP5 |
| YNL096C |
RPS7B |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> eukaryotic 48S initiation complex, cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, RAP1, SFP1 |
| |YOR213C| |
SAS5 |
chromatin silencing at telomere -> cell organization and biogenesis, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism, transcription |
acetyltransferase activity -> acetyltransferase activity |
nuclear chromosome\, telomeric region, nuclear chromatin -> chromosome, nuclear chromosome |
GRF10(Pho2), SUM1 |
| Main: |
|
biosynthesis (0.83) |
structural constituent of ribosome (0.50) |
cytoplasm (0.83) |
FHL1 RAP1 YAP5 (0.67) |
| Score: |
|
0.67 |
0.20 |
0.67 |
0.600 |
| P-value: |
|
1.770E-02 (biosynthesis) |
2.066E-02 (structural constituent of ribosome) |
1.614E-03 (cytosolic small ribosomal subunit (sensu Eukarya)) |
1.154E-05 (YAP5) |
RAP1(1) AND mRRPE(1) => SimExpr(YGL030W) OR SimExpr(other) : 7 3
RAP1(1) AND MCM1'(1) => SimExpr(YJR139C) OR SimExpr(other) : 18 2
RAP1(1) AND ALPHA2(1) => SimExpr(YJR139C) OR SimExpr(other) : 5 2
EXPR: (0.223) ALPHA2 (P < 0.000) RAP1 (P < 0.061)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YMR142C |
RPL13B |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic large ribosomal subunit (sensu Eukarya) -> cytoplasm, ribonucleoprotein complex |
FHL1, GAT3, RAP1, RGM1, YAP5 |
| YLR249W |
YEF3 |
translational elongation -> biosynthesis, protein metabolism |
translation elongation factor activity -> translation elongation factor activity |
ribosome -> cytoplasm, ribonucleoprotein complex |
INO2, INO4 |
| YJR139C |
HOM6 |
homoserine biosynthesis, methionine metabolism, threonine metabolism -> amine metabolism, sulfur metabolism, biosynthesis, amino acid and derivative metabolism, organic acid metabolism |
homoserine dehydrogenase activity -> homoserine dehydrogenase activity |
|
HMS1, RAP1 |
| YOR369C |
RPS12 |
protein biosynthesis -> biosynthesis, protein metabolism |
structural constituent of ribosome -> structural constituent of ribosome |
cytosolic small ribosomal subunit (sensu Eukarya) -> eukaryotic 48S initiation complex, cytoplasm, ribonucleoprotein complex |
ARG80, FHL1, FKH2, LEU3, NDD1, PDR1, RME1, SMP1, YAP6 |
| |YPL162C| |
NO SYMBOL |
|
|
|
|
| |YDL043C| |
PRP11 |
spliceosome assembly -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
RNA binding -> RNA binding |
snRNP U2 -> nucleus, ribonucleoprotein complex |
DAL81, STP1 |
| YNL311C |
NO SYMBOL |
|
|
|
GCN4, RAP1 |
| Main: |
|
biosynthesis (0.80) |
structural constituent of ribosome (0.40) |
ribonucleoprotein complex (1.00) |
RAP1 (0.50) |
| Score: |
|
0.60 |
0.10 |
1.00 |
0.267 |
| P-value: |
|
3.052E-01 (protein biosynthesis) |
3.977E-01 (structural constituent of ribosome) |
3.008E-02 (ribonucleoprotein complex) |
1.209E-01 (RAP1) |
RAP1(1) AND ALPHA1(1) AND MCM1'(1) => SimExpr(YJR139C) : 9
RAP1(1) AND MCM1'(1) => SimExpr(YKL006W) OR SimExpr(other) : 18 2
RAP1(1) AND ALPHA1(1) AND MCM1'(1) => SimExpr(YKL006W) : 9
RAP1(1) AND PDR(1) => SimExpr(YLR441C) OR SimExpr(other) : 5 1
RAP1(1) AND MCM1'(1) => SimExpr(YIL018W) OR SimExpr(other) : 18 2
RAP1(1) AND ALPHA1(1) AND MCM1'(1) => SimExpr(YIL018W) : 9
RAP1(1) AND mRRPE(1) => SimExpr(YLR249W) OR SimExpr(other) : 7 3
RAP1(1) AND ALPHA1(1) AND SFF(1) => SimExpr(YLR249W) OR SimExpr(other) : 12 5
RAP1(1) AND SWI5(1) AND SCB(1) => SimExpr(YLR249W) : 5
RAP1(1) AND PDR(1) => SimExpr(YNL096C) OR SimExpr(other) : 5 1
RAP1(1) AND mRRPE(1) => SimExpr(YPR080W) OR SimExpr(other) : 7 3
RAP1(1) AND SWI5(1) AND SCB(1) => SimExpr(YPR080W) : 5
ndt80(MSE)(1) AND mRRPE(1) => SimExpr(YFR023W) OR SimExpr(other) : 5 2
EXPR: (0.195) ndt80(MSE) (P < 0.025) mRRPE (P < 0.001)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YHR184W |
SSP1 |
spore wall assembly (sensu Saccharomyces), protein complex assembly -> protein metabolism, sporulation |
|
prospore membrane -> prospore |
SUM1 |
| YOR338W |
NO SYMBOL |
|
|
|
RAP1 |
| YOL091W |
SPO21 |
spore wall assembly (sensu Saccharomyces), meiosis -> cell proliferation, sporulation |
structural molecule activity -> structural molecule activity |
spindle pole body -> cytoplasm |
HAP5, SUM1 |
| YOR339C |
UBC11 |
protein polyubiquitination, protein monoubiquitination -> catabolism, protein metabolism |
ubiquitin conjugating enzyme activity -> ubiquitin conjugating enzyme activity |
cytoplasm -> cytoplasm |
HAP2, IXR1 |
| |YGL253W| |
HXK2 |
fructose metabolism -> alcohol metabolism, carbohydrate metabolism |
hexokinase activity -> hexokinase activity |
nucleus, cytosol -> nucleus, cytoplasm |
ABF1, CIN5, HSF1, SWI4 |
| |YJR007W| |
SUI2 |
translational initiation -> biosynthesis, protein metabolism |
translation initiation factor activity -> translation initiation factor activity |
ribosome, cytoplasm -> cytoplasm, ribonucleoprotein complex |
GLN3, HAP3, HIR1, RCS1 |
| YFR023W |
PES4 |
DNA dependent DNA replication -> cell proliferation, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
|
|
DIG1, FKH1, FKH2, GLN3, HAP3, MCM1, MSN2, RIM101, RLM1, RTG3, STE12, SUM1, THI2, YAP1 |
| Main: |
|
protein metabolism (0.50) |
ubiquitin conjugating enzyme activity (0.25) |
cytoplasm (0.80) |
SUM1 (0.43) |
| Score: |
|
0.33 |
0.00 |
0.60 |
0.190 |
| P-value: |
|
1.686E-02 (spore wall assembly (sensu Saccharomyces)) |
2.849E+00 (enzyme activity) |
3.294E+00 (cytoplasm) |
4.371E-03 (SUM1) |
ALPHA1(1) AND ALPHA2(1) AND MCB(1) => SimExpr(YOR144C) OR SimExpr(other) : 5 2
EXPR: (0.191) ALPHA2 (P < 0.000) MCB (P < 0.066) ALPHA1 (P < 0.000)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| |YPL140C| |
MKK2 |
protein amino acid phosphorylation, signal transduction -> phosphate metabolism, signal transduction, protein modification |
MAP kinase kinase activity -> protein kinase activity |
intracellular -> intracellular |
FKH1, FKH2 |
| YNL082W |
PMS1 |
mismatch repair, meiosis -> DNA repair, cell cycle, DNA metabolism |
ATPase activity, ATP binding, DNA binding -> ATP binding, DNA binding, hydrolase activity\, acting on acid anhydrides\, in phosphorus-containing anhydrides |
nuclear chromosome -> intracellular |
MTH1 |
| YPR185W |
APG13 |
protein-vacuolar targeting, autophagy -> cytoplasm organization and biogenesis, autophagy, intracellular transport, protein metabolism, protein transport |
protein binding -> protein binding |
extrinsic to membrane -> extrinsic to membrane |
MET4, SWI6 |
| |YJL095W| |
BCK1 |
protein amino acid phosphorylation, protein kinase cascade, response to nutrients, establishment of cell polarity (sensu Saccharomyces) -> phosphate metabolism, intracellular signaling cascade, response to extracellular stimulus, cytoplasm organization and biogenesis, protein modification, response to chemical substance |
MAP kinase kinase kinase activity -> protein kinase activity |
intracellular -> intracellular |
YAP1 |
| YFR027W |
ECO1 |
sister chromatid cohesion, DNA replication, DNA repair -> DNA metabolism, cell cycle |
acetyltransferase activity -> acyltransferase activity |
nuclear chromatin -> intracellular |
|
| YOR284W |
HUA2 |
|
|
|
RFX1, YAP6 |
| YOR144C |
ELG1 |
negative regulation of DNA transposition, negative regulation of DNA recombination -> DNA metabolism |
|
|
YJL206C |
| Main: |
|
DNA metabolism (0.50) |
protein kinase activity (0.40) |
intracellular (0.80) |
YAP1 (0.17) |
| Score: |
|
0.33 |
0.10 |
0.60 |
0.000 |
| P-value: |
|
3.096E-01 (protein amino acid phosphorylation) |
3.795E-01 (protein kinase activity) |
1.705E-01 (chromosome) |
7.321E-01 (YJL206C) |
ALPHA1(1) AND ALPHA1'(1) AND SFF(1) AND AFT1(1) => SimExpr(YHL035C) OR SimExpr(other) : 6 2
EXPR: (0.222) ALPHA1' (P < 0.000) SFF (P < 0.000) AFT1 (P < 0.001) ALPHA1 (P < 0.000)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YMR083W |
ADH3 |
fermentation -> fermentation |
alcohol dehydrogenase activity -> alcohol dehydrogenase activity |
mitochondrial matrix, soluble fraction -> mitochondrial matrix, soluble fraction |
RAP1 |
| |YOR389W| |
NO SYMBOL |
|
|
|
MCM1, YJL206C |
| YHL035C |
NO SYMBOL |
|
|
|
YFL044C |
| YMR253C |
NO SYMBOL |
|
|
|
MCM1 |
| YMR088C |
NO SYMBOL |
|
|
|
|
| |YHR209W| |
NO SYMBOL |
|
|
|
LEU3 |
| YOR381W |
FRE3 |
iron-siderochrome transport, iron ion homeostasis -> iron-siderochrome transport, iron ion homeostasis |
ferric-chelate reductase activity -> ferric-chelate reductase activity |
plasma membrane, integral to membrane -> plasma membrane, integral to membrane |
CIN5, PDR1, YAP6 |
| YKL167C |
MRP49 |
protein biosynthesis -> protein biosynthesis |
structural constituent of ribosome -> structural constituent of ribosome |
mitochondrial large ribosomal subunit -> mitochondrial matrix, large ribosomal subunit, organellar ribosome |
ABF1, IME4, IXR1 |
| Main: |
|
iron ion homeostasis (0.33) |
ferric-chelate reductase activity (0.33) |
mitochondrial matrix (0.67) |
MCM1 (0.29) |
| Score: |
|
0.00 |
0.00 |
0.33 |
0.048 |
| P-value: |
|
3.993E+00 (metabolism) |
4.865E-01 (oxidoreductase activity) |
2.572E-01 (mitochondrial matrix) |
3.069E-01 (MCM1) |
ABF1(1) AND SFF(1) AND PAC(1) => SimExpr(YKL014C) OR SimExpr(other) : 6 1
EXPR: (0.194) ABF1 (P < 0.000) SFF (P < 0.000) PAC (P < 0.005)
ABF1(1) AND mRRPE(1) AND PAC(1) => SimExpr(YKL014C) OR SimExpr(other) : 8 2
EXPR: (0.202) ABF1 (P < 0.000) mRRPE (P < 0.000) PAC (P < 0.003)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| YNL292W |
PUS4 |
tRNA modification -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
pseudouridylate synthase activity -> pseudouridylate synthase activity |
mitochondrion, nucleus -> cytoplasm, nucleus |
RCS1 |
| YPR010C |
RPA135 |
transcription from Pol I promoter -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
DNA-directed RNA polymerase activity -> DNA-directed RNA polymerase activity |
DNA-directed RNA polymerase I complex -> nucleus |
ROX1, SIG1 |
| |YNR046W| |
NO SYMBOL |
|
|
|
ABF1 |
| YJL050W |
MTR4 |
35S primary transcript processing -> cell organization and biogenesis, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
ATP dependent RNA helicase activity -> RNA helicase activity, ATP dependent helicase activity, RNA dependent ATPase activity |
nucleolus -> nucleus |
|
| YKL172W |
EBP2 |
rRNA processing -> cell organization and biogenesis, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
|
nucleolus -> nucleus |
ABF1, FZF1, RFX1 |
| |YLR197W| |
SIK1 |
rRNA modification, 35S primary transcript processing, processing of 20S pre-rRNA -> cell organization and biogenesis, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism, transcription |
|
small nuclear ribonucleoprotein complex, small nucleolar ribonucleoprotein complex, nucleus, nucleolus -> nucleus, ribonucleoprotein complex |
DAL81, HAL9 |
| YGR187C |
HGH1 |
|
|
|
ABF1, HAP3, HIR1, RCS1, RTG1 |
| YKL014C |
NO SYMBOL |
|
|
|
ABF1 |
| YNL112W |
DBP2 |
|
RNA helicase activity -> RNA helicase activity |
bud neck -> site of polarized growth (sensu Fungi) |
|
| YJL069C |
UTP18 |
|
|
|
ABF1 |
| Main: |
|
nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism (1.00) |
RNA helicase activity (0.50) |
nucleus (0.83) |
ABF1 (0.62) |
| Score: |
|
1.00 |
0.17 |
0.67 |
0.393 |
| P-value: |
|
5.515E-03 (transcription from Pol I promoter) |
4.187E-02 (RNA helicase activity) |
2.839E-03 (nucleolus) |
3.110E-03 (ABF1) |
ABF1(1) AND ALPHA1'(1) AND PAC(1) => SimExpr(YKL014C) : 5
ABF1(1) AND SFF(1) AND PAC(1) => SimExpr(YGR187C) OR SimExpr(other) : 5 2
ABF1(1) AND ALPHA1'(1) AND PAC(1) => SimExpr(YOL041C) : 5
ABF1(1) AND SFF(1) AND PAC(1) => SimExpr(YNL292W) OR SimExpr(other) : 6 1
LYS14(1) AND mRRPE(1) AND MCM1'(1) => SimExpr(YML093W) OR SimExpr(other) : 6 2
EXPR: (0.212) LYS14 (P < 0.000) mRRPE (P < 0.000) MCM1' (P < 0.000)
| ORF |
SYMBOL |
P |
F |
C |
TF |
| |YNL042W| |
BOP3 |
|
|
|
DAL82 |
| YGR280C |
PXR1 |
35S primary transcript processing, snRNA processing -> cell organization and biogenesis, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
RNA binding -> RNA binding |
nucleolus -> nucleus |
|
| YDL140C |
RPO21 |
transcription from Pol II promoter -> nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
DNA-directed RNA polymerase activity -> transferase activity\, transferring phosphorus-containing groups |
DNA-directed RNA polymerase II\, core complex -> nucleus |
REB1 |
| YML093W |
UTP14 |
processing of 20S pre-rRNA -> cell organization and biogenesis, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism |
snoRNA binding -> RNA binding |
small nucleolar ribonucleoprotein complex -> nucleus, ribonucleoprotein complex |
|
| YOL130W |
ALR1 |
di-\, tri-valent inorganic cation transport, magnesium ion transport -> transport |
di-\, tri-valent inorganic cation transporter activity -> cation transporter activity |
plasma membrane -> plasma membrane |
|
| |YLR328W| |
NMA1 |
nicotinamide adenine dinucleotide metabolism -> coenzymes and prosthetic group metabolism, vitamin metabolism |
nicotinamide-nucleotide adenylyltransferase activity -> transferase activity\, transferring phosphorus-containing groups |
|
CIN5, MSN1, ROX1 |
| YDL088C |
ASM4 |
protein-nucleus import\, docking, mRNA-nucleus export, rRNA-nucleus export, snRNA-nucleus export, NLS-bearing substrate-nucleus import, snRNP protein-nucleus import, mRNA-binding (hnRNP) protein-nucleus import, ribosomal protein-nucleus import, protein-nucleus export, nuclear pore organization and biogenesis -> intracellular transport, nuclear organization and biogenesis, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism, protein metabolism, transport |
structural molecule activity -> structural molecule activity |
nuclear pore -> nucleus, integral to membrane, endomembrane system |
|
| YMR042W |
ARG80 |
positive regulation of transcription from Pol II promoter, arginine metabolism -> amine metabolism, nitrogen metabolism, nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism, amino acid and derivative metabolism, organic acid metabolism |
DNA binding, specific RNA polymerase II transcription factor activity -> DNA binding, specific RNA polymerase II transcription factor activity |
nucleus -> nucleus |
RME1 |
| Main: |
|
nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism (0.71) |
RNA binding (0.29) |
nucleus (0.83) |
DAL82 (0.25) |
| Score: |
|
0.52 |
0.10 |
0.67 |
0.000 |
| P-value: |
|
1.624E-01 (transcription\, DNA-dependent) |
7.594E-02 (nucleotidyltransferase activity) |
2.848E-01 (nucleolus) |
2.035E-01 (MSN1) |
LYS14(1) AND mRRPE(1) AND PAC(1) => SimExpr(YML093W) OR SimExpr(other) : 6 2
LYS14(1) AND mRRPE(1) AND PAC(1) => SimExpr(YHR052W) OR SimExpr(other) : 7 1
AVERAGE SCORES:
P
SCORE: 0.544 (Part of genes covered by "Main": 0.672) (No. rules=39/39)
P-VALUE: 0.462
F
SCORE: 0.181 (Part of genes covered by "Main": 0.418) (No. rules=39/39)
P-VALUE: 0.308
C
SCORE: 0.604 (Part of genes covered by "Main": 0.753) (No. rules=39/39)
P-VALUE: 0.410
TF
SCORE: 0.353 (Part of genes covered by "Main": 0.515) (No. rules=39/39)
P-VALUE: 0.538
EXPRESSION: 0.718 (39)