Transcript Level Alterations Reflect Gene Dosage Effects Across Multiple Tissues in a Mouse Model of Down Syndrome

Symbol Forward primer (5'--3') Reverse primer (5'--3') Amplicon size in bp
Adamts5 GCCCACCCAATGGTAAATCTTT TGACTCCTTTTGCATCAGACTGA 78
App AAGTCGATGAGCTGCTTCAGAAG CTGATTCTGGGCTCACTGATCA 79
Atp5a TCGTGGACAAGATAAGAGAGTACAAATC TTGCTGATACTCTGGGCCAAT 80
Atp5o CTGCCTTTTCCACCATCATGA AGAGGAGATGCTGTGGTCACTGT 70
Bace2 TCGCTCCTTCCGGATCAC AATTGAAACCAGCTCCCATCA 68
C21orf51 CCGCCCTGAGTATCAGAACTTC ACCTGTTACACACAGGCATGAGA 75
C21orf56 CAACATTCCTGAGAAGATCAAGCA GCTCACGCAGCTTCTTCTCAT 77
C21orf63 GTTCCCAGGAGCCCATCTC CGTCCAGCACCTTCTGCAA 78
C21orf7 CCAGTTCGCATCGCGTTTAG ACCAAAGGAATGGCATCTTCA 70
Cbr1 GCATCGCCTTCAAGGTCAA AGGGAGCAGCTCCTTGCA 106
Dscr2 CCCTCGGTTTTTCTATGTCAGTGT AAACCTTCTCCAACCACTGGAA 73
Dscr5 GGCTTAACTTACTGGCCTCAAAAA AAATAAGAGCACATAACCAATTACAACTG 90
Dyrk1a GTGCCAATGAGGTCGATCAGA GCTTTCGGTGCTTGGTCAA 85
Fam3b ATTCAGAGCACTCCTTCAAAATCC AGCCTTCAGTTTGGAACTTCCA 72
Ftcd AGGTGCTGGCCATGTCTCA CATCAATCACCTCCTGGTTGTTC 75
Gart CAGAAAATGGGACGGGAAAA TGCTCGTGGGCATTTGAAC 78
Hmbs CCTGGGCGGAGTCATGTC ACTCGAATCACCCTCATCTTTGA 81
Hmgn1 CGCGGGAAAGGATAAAGCA AGCCACGTCAGCCTGTTTG 82
Hprt GCTTTCCCTGGTTAAGCAGTACA GAGAGGTCCTTTTCACCAGCAA 71
Jam2 TAGAAGTACTAGTGGCTCCTGCTGTT GAGCTGGGTTTCCTTCTTTATCC 108
Kcne1 CGCTGCACACACCAGGTT CAGAGCAAAACTCCTGGGTCTAG 51
Kcne2 TGCTCACATACCACACAGCAA TCCAGCTGTCCATATAAGTAATAAAAATCT 109
Kiaa0184 CAGCTCTCTGCGCATGTTGA GAGGAAGGCATCGCAGGAA 73
mIl10rb CGGACAGGCAATGACGAAA CCAGGACGGAGACTATGAGGAT 67
Mrps6 CCCGCTACGAGTTGGCTTT TCAGGGATTCTATTGTACGTTTCAAA 84
Mx1 ACTCTCAGTTTCCTCAAAAGG CCGTCTGCACTCCTGGTAGT 55
Mx2 AATTTCGCAAAAGGTTATGCTGTT TCACAAACCCTGGCAATTCTC 88
Pmm2 AGGGAAAGGCCTCACGTTCT AATACCGCTTATCCCATCCTTCA 77
Pttg1ip GCCTCCGCGCAGGAA CTGAGGCACTCTTCACAGGATCT 71
Sh3bgr GTTATCAAAGTGTTTGTTGCCACAT GCCCACCACTTCTTGCTGTT 72
Sim2 TGTCAATTATGTTCTCACGGATGTT CAGAGACAGCTGAAGTTCCTTGTATTC 52
Snf1lk GACCGGCAGCGGACTATAGAG AGGCGCTCGAGTAGGAGGTAGTA 83
Sod1 AGTGCAGGACCTCATTTTAATCCT GGTCTCCAACATGCCTCTCTTC 76
Son CGACATCGAGCAGGTTTTCA GGTGGATTTGTTTCACCATTCA 111
Synj1 AAAATCACGTAAAGCCCACACA TCCATGACTACCAATCCTCAACA 77
Tff3 GCCCTCTGGCTAATGCTGTT TTGGAGACAGGCCAACGTAAT 79
Tmprss2 TTTGGAGGTTCTGGGACAGC GCTGATGCATGTGCCTAGAGAC 71
Tmprss3 AGCGGCTGGGCAATGA GGCTGGATGGTCTCGTCAAA 70
Usp16 GAGCGTCTGGTGCTACAAGTGT ATAATCAACCACTTGGCCCAAT 76
Usp25 CAGGGAGACGGGCATAACC TTATTTTCTGCTATGCTGGCTTCA 72
Znf294 CTTCGGCTTTGGATAACACAAGT AGAGACGTGTCCTCACTCTCTACAAG 91
Znf295 AGGAGTTTGAGCAAGGCAACC CAGTGCGGGAGAGAAGAACCT 89

This Article

  1. doi: 10.1101/gr.1951304 Genome Res. July 2004 vol. 14 no. 7 1258-1267
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