Reconstructing the Genomic Architecture of Ancestral Mammals: Lessons From Human, Mouse, and Rat Genomes

Synteny key

Jump to Human chromosome 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, X, Y.
Jump to Mouse chromosome 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, X.
Jump to Rat chromosome 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, X.

Sorted by order in Human

Jump to Human chromosome 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, X, Y.

Human chromosome 1, length 245203898
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
1 1 1,008,947 26,019,684 25,010,738 + 4 132,039,996 152,701,590 20,661,595 - 5 152,737,306 172,891,838 20,154,533 -
2 1 26,124,313 27,828,851 1,704,539 + 4 130,626,312 131,915,486 1,289,175 - 5 151,290,370 152,659,188 1,368,819 +
3 1 28,515,209 58,369,437 29,854,229 + 4 101,290,473 130,234,350 28,943,878 - 5 124,266,877 151,153,913 26,887,037 -
4 1 58,488,842 66,969,862 8,481,021 + 4 92,892,570 101,289,705 8,397,136 + 5 115,259,111 124,265,993 9,006,883 +
5 1 67,059,806 67,674,317 614,512 + 6 67,189,228 67,743,995 554,768 - 4 96,704,933 97,341,801 636,869 -
6 1 67,964,958 88,755,488 20,790,531 + 3 143,376,001 160,652,680 17,276,680 - 2 240,829,661 258,118,296 17,288,636 -
7 1 89,320,430 93,175,140 3,854,711 + 5 102,559,569 105,473,748 2,914,180 + 14 2,008,711 5,499,620 3,490,910 -
8 1 93,262,870 119,662,221 26,399,352 + 3 98,440,166 123,090,061 24,649,896 - 2 192,897,432 219,252,549 26,355,118 -
9 1 143,154,723 143,618,806 464,084 + 3 96,886,172 97,207,979 321,808 + 2 191,312,587 191,642,007 329,421 +
10 1 143,983,899 144,653,633 669,735 + 3 97,307,416 98,003,257 695,842 - 2 191,730,475 192,464,565 734,091 -
11 1 146,529,244 153,896,409 7,367,166 + 3 88,551,101 96,613,838 8,062,738 - 2 179,503,960 191,066,835 11,562,876 -
12 1 156,157,255 204,116,087 47,958,833 + 1 130,778,848 173,830,820 43,051,973 - 13 43,402,099 89,483,986 46,081,888 -
13 1 204,247,249 220,748,493 16,501,245 + 1 183,066,795 195,763,487 12,696,693 - 13 98,507,462 111,341,765 12,834,304 -
14 1 220,826,336 222,362,416 1,536,081 + 1 181,835,826 182,860,958 1,025,133 + 13 97,053,241 98,302,131 1,248,891 +
15 1 222,417,706 224,013,850 1,596,145 + 1 180,540,452 181,748,090 1,207,639 - 13 95,727,982 96,931,919 1,203,938 -
16 1 224,305,631 224,949,425 643,795 + 11 59,628,085 60,086,329 458,245 - 10 45,303,454 45,773,540 470,087 -
17 1 225,344,647 230,732,715 5,388,069 + 8 123,324,555 125,925,283 2,600,729 + 19 53,909,835 56,546,928 2,637,094 +
18 1 231,635,074 231,964,196 329,123 + 13 13,372,764 13,615,029 242,266 - 17 59,347,752 59,586,710 238,959 +
19 1 232,092,913 236,358,242 4,265,330 + 13 9,879,048 13,212,970 3,333,923 - 17 66,564,886 71,222,372 4,657,487 +
20 1 236,519,351 243,221,431 6,702,081 + 1 175,268,471 180,513,949 5,245,479 + 13 90,381,918 95,701,076 5,319,159 +

Human chromosome 2, length 243315028
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
21 2 23,769 1,573,787 1,550,019 + 12 24,214,315 25,218,396 1,004,082 - 6 47,988,544 48,929,150 940,607 -
22 2 1,725,528 3,112,195 1,386,668 + 12 23,109,442 24,141,540 1,032,099 + 6 46,882,304 47,911,777 1,029,474 +
23 2 3,235,032 4,603,629 1,368,598 + 12 22,034,804 22,781,774 746,971 - 6 45,727,940 46,540,626 812,687 -
24 2 4,739,483 5,096,544 357,062 + 12 22,814,002 23,039,964 225,963 - 6 46,571,003 46,798,333 227,331 -
25 2 5,185,702 9,162,383 3,976,682 + 12 18,926,859 21,955,069 3,028,211 - 6 42,470,548 45,669,869 3,199,322 -
26 2 9,946,222 10,289,678 343,457 + 12 18,562,291 18,826,735 264,445 + 6 42,094,408 42,367,092 272,685 +
27 2 10,308,057 26,269,132 15,961,076 + 12 3,138,326 17,875,337 14,737,012 - 6 26,264,436 41,530,905 15,266,470 -
28 2 26,419,666 28,939,526 2,519,861 + 5 28,367,317 30,687,124 2,319,808 + 6 24,096,423 26,187,652 2,091,230 -
29 2 29,022,277 35,636,081 6,613,805 + 17 70,095,329 75,803,043 5,707,715 + 6 17,872,982 24,029,711 6,156,730 -
30 2 35,766,488 52,007,641 16,241,154 + 17 75,929,072 90,619,297 14,690,226 + 6 7,200 16,728,941 16,721,742 +
31 2 53,899,193 68,650,050 14,750,858 + 11 17,035,064 31,226,099 14,191,036 - 14 97,844,733 112,187,533 14,342,801 -
32 2 68,652,539 70,972,655 2,320,117 + 6 86,517,241 88,185,210 1,667,970 - 4 120,402,902 122,093,885 1,690,984 -
33 2 71,005,288 73,958,819 2,953,532 + 6 84,119,782 86,452,697 2,332,916 + 4 118,093,921 120,345,149 2,251,229 +
34 2 74,013,786 89,030,983 15,017,198 + 6 71,163,962 84,036,296 12,872,335 - 4 104,153,241 118,035,884 13,882,644 -
35 2 95,153,611 95,526,148 372,538 + 2 129,095,778 129,307,709 211,932 - 3 114,857,818 115,100,933 243,116 -
36 2 96,631,953 106,298,952 9,667,000 + 1 36,686,489 44,176,943 7,490,455 + 9 35,192,203 42,951,846 7,759,644 +
37 2 108,028,083 108,416,081 387,999 + 17 52,399,841 52,724,621 324,781 - 9 14,953 411,056 396,104 +
38 2 108,689,995 109,217,110 527,116 + 10 57,898,031 58,319,703 421,673 + 20 37,093,866 37,523,460 429,595 -
39 2 111,302,197 113,552,965 2,250,769 + 2 129,447,434 131,058,047 1,610,614 + 3 115,229,933 116,927,667 1,697,735 +
40 2 113,630,811 113,947,918 317,108 + 2 24,434,655 24,744,349 309,695 + 3 2,417,207 2,730,909 313,703 +
41 2 114,345,182 122,364,910 8,019,729 + 1 118,534,026 125,877,578 7,343,553 - 13 30,993,749 38,138,107 7,144,359 -
42 2 127,318,429 128,680,440 1,362,012 + 18 31,927,242 32,840,677 913,436 - 18 24,090,509 25,033,767 943,259 -
43 2 128,726,070 130,221,309 1,495,240 + 1 35,570,073 36,673,055 1,102,983 - 9 33,991,157 35,179,343 1,188,187 -
44 2 131,536,309 131,913,009 376,701 + 1 34,950,982 35,244,289 293,308 + 9 33,327,118 33,607,958 280,841 +
45 2 133,161,439 138,624,340 5,462,902 + 1 125,901,187 130,650,394 4,749,208 + 13 38,171,256 43,305,081 5,133,826 +
46 2 140,343,444 188,307,563 47,964,120 + 2 40,591,977 85,756,774 45,164,798 + 3 19,786,038 67,560,634 47,774,597 +
47 2 189,124,764 190,463,376 1,338,613 + 1 45,003,320 46,460,325 1,457,006 + 9 43,544,320 45,064,183 1,519,864 +
48 2 190,583,916 196,542,303 5,958,388 + 1 47,391,297 53,906,318 6,515,022 - 9 45,174,028 52,204,175 7,030,148 +
49 2 196,928,124 242,694,750 45,766,627 + 1 54,326,643 94,053,582 39,726,940 + 9 52,546,230 93,306,576 40,760,347 +

Human chromosome 3, length 199411731
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
50 3 452,508 12,864,927 12,412,420 + 6 104,421,326 116,482,938 12,061,613 + 4 139,469,722 152,183,371 12,713,650 +
51 3 12,997,408 15,135,116 2,137,709 + 6 91,148,149 92,665,814 1,517,666 + 4 125,137,129 126,642,689 1,505,561 +
52 3 15,239,717 16,285,627 1,045,911 + 14 26,063,083 26,805,429 742,347 + 16 6,784,150 7,536,640 752,491 +
53 3 16,926,804 19,440,118 2,513,315 + 17 48,793,881 51,281,893 2,488,013 + 9 2,076,383 4,866,245 2,789,863 -
54 3 22,999,942 27,550,695 4,550,754 + 14 9,829,253 14,339,560 4,510,308 - 15 8,403,218 12,329,152 3,925,935 +
55 3 27,613,969 28,957,035 1,343,067 + 9 117,541,959 118,580,740 1,038,782 - 8 122,376,410 123,396,007 1,019,598 -
56 3 29,100,141 37,057,695 7,957,555 + 9 111,215,250 117,419,259 6,204,010 - 8 115,511,699 121,913,726 6,402,028 -
57 3 37,082,953 42,374,588 5,291,636 + 9 118,599,020 121,941,265 3,342,246 + 8 123,414,478 126,687,360 3,272,883 +
58 3 42,509,183 43,110,210 601,028 + 9 122,045,760 122,381,660 335,901 + 8 126,866,553 127,200,780 334,228 -
59 3 43,191,764 43,620,426 428,663 + 9 122,449,940 122,701,888 251,949 + 8 121,977,073 122,215,418 238,346 +
60 3 43,773,508 46,237,015 2,463,508 + 9 122,806,626 124,433,003 1,626,378 + 8 127,254,039 128,932,780 1,678,742 +
61 3 46,360,179 52,076,058 5,715,880 + 9 106,365,015 111,107,296 4,742,282 - 8 111,413,457 115,410,217 3,996,761 -
62 3 52,212,642 57,767,106 5,554,465 + 14 21,127,642 26,046,337 4,918,696 - 16 1,708,065 6,750,520 5,042,456 -
63 3 57,800,573 63,864,162 6,063,590 + 14 3,094,324 9,435,424 6,341,101 + 15 12,650,439 19,089,527 6,439,089 -
64 3 63,878,798 75,092,912 11,214,115 + 6 92,756,116 103,952,939 11,196,824 + 4 126,750,102 138,664,697 11,914,596 +
65 3 75,762,301 90,025,409 14,263,109 + 16 63,388,930 75,905,846 12,516,917 - 11 15,615 14,241,004 14,225,390 -
66 3 95,064,492 95,461,472 396,981 + 16 62,737,116 63,162,247 425,132 - 11 38,216,773 38,643,274 426,502 +
67 3 95,899,519 96,339,037 439,519 + 16 62,033,882 62,370,510 336,629 - 11 39,134,329 39,530,971 396,643 -
68 3 96,390,755 126,594,916 30,204,162 + 16 32,971,244 61,979,366 29,008,123 - 11 39,591,957 69,475,340 29,883,384 +
69 3 127,608,320 129,524,328 1,916,009 + 6 88,702,635 90,213,216 1,510,582 - 4 122,487,154 124,015,409 1,528,256 -
70 3 129,916,551 130,317,226 400,676 + 6 88,194,315 88,493,392 299,078 + 4 122,102,044 122,425,945 323,902 +
71 3 130,402,044 130,895,952 493,909 + 6 116,491,951 116,871,019 379,069 + 4 152,191,754 152,564,887 373,134 +
72 3 131,213,263 149,354,530 18,141,268 + 9 90,298,116 106,139,750 15,841,635 - 8 95,233,957 111,254,289 16,020,333 -
73 3 149,715,846 150,224,969 509,124 + 3 19,671,962 20,070,597 398,636 - 2 105,027,911 105,520,820 492,910 -
74 3 150,355,664 169,224,070 18,868,407 + 3 57,499,943 76,895,869 19,395,927 + 2 146,455,282 166,821,107 20,365,826 +
75 3 169,307,966 170,409,406 1,101,441 + 3 28,789,311 29,953,767 1,164,457 + 2 113,637,912 114,965,675 1,327,764 +
76 3 170,471,630 171,919,776 1,448,147 + 3 30,015,913 31,403,750 1,387,838 + 2 116,201,091 117,600,840 1,399,750 -
77 3 171,945,855 173,034,634 1,088,780 + 3 27,612,204 28,646,852 1,034,649 - 2 115,089,831 116,157,085 1,067,255 -
78 3 173,196,601 179,505,650 6,309,050 + 3 20,305,662 27,470,783 7,165,122 - 2 105,903,817 113,537,659 7,633,843 -
79 3 179,525,476 184,219,239 4,693,764 + 3 31,457,457 35,853,513 4,396,057 + 2 117,834,988 122,414,497 4,579,510 +
80 3 184,619,216 196,679,051 12,059,836 + 16 19,707,371 31,064,744 11,357,374 + 11 71,368,868 83,309,936 11,941,069 -
81 3 196,836,950 198,725,190 1,888,241 + 16 31,182,838 32,596,172 1,413,335 - 11 69,855,065 71,254,824 1,399,760 +
82 3 198,811,349 199,169,931 358,583 + 16 32,611,252 32,912,851 301,600 + 11 69,536,754 69,838,620 301,867 -

Human chromosome 4, length 191610523
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
83 4 483,120 1,099,132 616,013 + 5 105,507,823 105,974,537 466,715 + 14 1,487,418 1,980,786 493,369 -
84 4 1,525,212 3,792,758 2,267,547 + 5 31,787,970 33,542,816 1,754,847 + 14 81,121,121 82,902,654 1,781,534 -
85 4 4,200,518 8,859,586 4,659,069 + 5 33,728,651 36,651,411 2,922,761 - 14 77,795,153 80,931,046 3,135,894 +
86 4 10,146,763 89,382,043 79,235,281 + 5 37,285,094 101,594,831 64,309,738 + 14 6,355,607 77,358,748 71,003,142 -
87 4 89,899,386 95,648,582 5,749,197 + 6 59,025,574 65,450,656 6,425,083 + 4 87,960,959 94,873,819 6,912,861 +
88 4 95,686,485 121,086,919 25,400,435 + 3 123,171,313 143,108,273 19,936,961 - 2 219,288,313 240,368,485 21,080,173 -
89 4 121,400,033 122,531,907 1,131,875 + 6 65,847,927 66,834,910 986,984 - 4 95,330,871 96,612,525 1,281,655 -
90 4 122,770,111 141,655,864 18,885,754 + 3 36,161,715 52,378,552 16,216,838 + 2 122,730,612 141,017,098 18,286,487 +
91 4 141,729,720 151,161,098 9,431,379 + 8 74,629,255 82,733,961 8,104,707 - 19 26,355,591 34,354,680 7,999,090 +
92 4 151,432,923 163,561,645 12,128,723 + 3 76,972,197 87,997,496 11,025,300 - 2 166,916,146 178,919,669 12,003,524 -
93 4 163,977,702 189,845,453 25,867,752 + 8 41,961,455 66,363,704 24,402,250 - 16 23,969,512 52,638,044 28,668,533 +
94 4 189,885,350 190,209,182 323,833 + 8 41,589,899 41,918,061 328,163 - 16 52,664,787 52,959,427 294,641 -
95 4 190,289,343 191,375,700 1,086,358 + 8 40,510,604 41,541,277 1,030,674 - 16 53,049,707 54,185,955 1,136,249 +

Human chromosome 5, length 180967295
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
96 5 224,246 1,534,470 1,310,225 + 13 69,715,670 70,599,707 884,038 - 1 29,727,672 30,609,467 881,796 +
97 5 1,799,944 7,932,909 6,132,966 + 13 64,773,898 69,580,216 4,806,319 - 17 25,413 5,117,327 5,091,915 +
98 5 8,988,817 42,875,292 33,886,476 + 15 3,054,929 32,710,661 29,655,733 - 2 52,318,217 85,141,018 32,822,802 -
99 5 43,487,121 51,536,733 8,049,613 + 13 112,255,387 116,241,531 3,986,145 - 2 47,140,209 51,592,099 4,451,891 -
100 5 51,540,216 52,107,535 567,320 + 13 111,800,211 112,244,371 444,161 - 2 45,794,979 46,302,157 507,179 -
101 5 52,122,061 52,938,394 816,334 + 13 111,042,524 111,789,213 746,690 - 2 46,309,714 47,127,767 818,054 -
102 5 52,944,552 87,136,776 34,192,225 + 13 81,002,138 111,036,378 30,034,241 - 2 13,540,368 45,772,081 32,231,714 -
103 5 87,184,707 87,590,723 406,017 + 13 80,503,014 80,948,792 445,779 - 2 12,801,417 13,450,292 648,876 +
104 5 87,662,643 96,156,628 8,493,986 + 13 70,895,509 80,422,316 9,526,808 - 2 1,480,962 12,729,471 11,248,510 -
105 5 96,514,371 97,930,390 1,416,020 + 17 14,465,634 15,748,267 1,282,634 - 1 54,685,883 55,920,749 1,234,867 -
106 5 98,475,372 98,828,694 353,323 + 1 94,244,380 94,780,051 535,672 + 9 93,472,652 93,981,598 508,947 +
107 5 98,922,797 99,686,335 763,539 + 1 94,794,979 95,281,218 486,240 - 9 94,002,239 94,554,914 552,676 -
108 5 99,770,820 101,656,234 1,885,415 + 1 95,386,472 97,057,266 1,670,795 + 9 94,662,569 96,296,467 1,633,899 +
109 5 101,961,253 102,758,531 797,279 + 1 97,722,109 98,531,657 809,549 - 9 96,888,539 97,555,177 666,639 +
110 5 102,790,626 110,087,796 7,297,171 + 17 57,291,811 63,983,633 6,691,823 + 9 97,590,744 104,509,469 6,918,726 +
111 5 110,330,256 112,300,511 1,970,256 + 18 32,989,872 34,648,856 1,658,985 + 18 25,203,283 26,882,653 1,679,371 +
112 5 112,343,444 119,195,956 6,852,513 + 18 44,683,573 50,813,910 6,130,338 + 18 38,087,713 45,661,228 7,573,516 +
113 5 119,237,317 119,681,165 443,849 + 18 50,883,088 51,363,121 480,034 - 18 45,760,134 46,255,712 495,579 -
114 5 119,754,901 130,393,506 10,638,606 + 18 51,387,441 60,551,392 9,163,952 + 18 46,278,042 56,157,207 9,879,166 +
115 5 130,515,065 134,041,783 3,526,719 + 11 52,329,289 55,469,192 3,139,904 - 10 37,258,867 40,291,554 3,032,688 -
116 5 134,110,536 137,121,370 3,010,835 + 13 54,753,961 57,275,131 2,521,171 + 17 12,450,088 15,039,374 2,589,287 -
117 5 137,256,961 147,601,401 10,344,441 + 18 34,675,593 44,363,337 9,687,745 + 18 26,903,401 37,782,702 10,879,302 +
118 5 147,631,363 150,153,185 2,521,823 + 18 60,852,180 62,986,917 2,134,738 - 18 56,505,479 58,810,679 2,305,201 -
119 5 150,371,650 154,300,804 3,929,155 + 11 55,487,780 58,795,600 3,307,821 + 10 40,310,646 43,809,932 3,499,287 +
120 5 154,315,022 171,867,674 17,552,653 + 11 32,467,389 49,314,412 16,847,024 - 10 17,131,975 34,051,239 16,919,265 -
121 5 171,905,279 172,653,862 748,584 + 17 25,049,044 25,588,115 539,072 + 10 16,555,003 17,104,432 549,430 -
122 5 172,672,382 173,646,386 974,005 + 11 31,516,525 32,322,987 806,463 + 10 15,724,989 16,533,000 808,012 -
123 5 173,698,426 174,108,907 410,482 + 13 52,517,696 52,821,131 303,436 - 17 16,952,709 17,261,112 308,404 +
124 5 174,313,895 176,838,415 2,524,521 + 13 52,847,558 54,617,290 1,769,733 + 17 15,190,982 16,927,859 1,736,878 -
125 5 177,571,541 180,131,327 2,559,787 + 11 50,214,395 52,277,718 2,063,324 - 10 35,080,915 37,200,130 2,119,216 -

Human chromosome 6, length 170740541
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
126 6 171,329 20,091,196 19,919,868 + 13 30,005,519 47,975,573 17,970,055 + 17 22,348,024 40,395,386 18,047,363 -
127 6 20,128,213 29,062,976 8,934,764 + 13 20,581,436 29,723,675 9,142,240 - 17 40,764,556 51,251,891 10,487,336 +
128 6 30,574,738 33,298,628 2,723,891 + 17 32,504,226 34,609,513 2,105,288 - 20 2,932,295 5,131,591 2,199,297 +
129 6 33,387,532 39,057,666 5,670,135 + 17 25,634,769 29,653,058 4,018,290 + 20 5,175,793 9,265,214 4,089,422 +
130 6 39,329,559 49,309,689 9,980,131 + 17 39,339,031 48,167,128 8,828,098 - 9 6,299,472 15,617,051 9,317,580 +
131 6 49,804,425 52,564,568 2,760,144 + 1 18,397,584 21,567,473 3,169,890 + 9 16,972,923 19,990,794 3,017,872 +
132 6 52,834,661 55,782,426 2,947,766 + 9 76,021,028 78,514,375 2,493,348 - 8 80,569,544 83,187,953 2,618,410 -
133 6 56,226,627 73,852,589 17,625,963 + 1 21,680,833 34,779,214 13,098,382 - 9 20,182,484 33,154,700 12,972,217 -
134 6 74,142,308 86,335,230 12,192,923 + 9 78,812,708 88,920,049 10,107,342 + 8 83,463,262 93,808,463 10,345,202 +
135 6 87,746,118 100,244,557 12,498,440 + 4 21,146,378 34,734,045 13,587,668 - 5 36,128,379 51,549,009 15,420,631 -
136 6 100,632,494 116,674,803 16,042,310 + 10 33,966,286 51,212,456 17,246,171 - 20 38,615,960 55,288,911 16,672,952 -
137 6 117,056,114 123,081,804 6,025,691 + 10 51,523,123 57,805,391 6,282,269 + 20 30,213,579 36,867,533 6,653,955 +
138 6 123,263,976 127,804,406 4,540,431 + 10 28,828,983 33,358,638 4,529,656 - 1 24,296,408 29,541,572 5,245,165 +
139 6 128,297,465 135,126,991 6,829,527 + 10 21,161,982 28,233,846 7,071,865 - 1 17,311,535 24,116,245 6,804,711 +
140 6 135,159,846 149,847,823 14,687,978 + 10 7,438,077 21,136,850 13,698,774 - 1 2,438,998 16,775,531 14,336,534 -
141 6 150,388,133 154,874,716 4,486,584 + 10 3,225,655 7,134,615 3,908,961 + 1 33,974,084 38,016,899 4,042,816 +
142 6 155,054,221 158,791,324 3,737,104 + 17 3,003,519 6,062,080 3,058,562 - 1 38,128,249 41,035,436 2,907,188 +
143 6 159,007,266 159,857,341 850,076 + 17 6,261,888 7,242,594 980,707 - 1 41,172,133 41,824,585 652,453 +
144 6 160,058,418 166,617,149 6,558,732 + 17 7,381,444 12,077,201 4,695,758 - 1 42,124,363 47,084,789 4,960,427 +
145 6 166,685,005 167,000,290 315,286 + 17 6,775,014 6,968,134 193,121 + 1 47,356,448 47,546,634 190,187 -
146 6 167,761,130 170,546,805 2,785,676 + 17 12,270,176 14,010,520 1,740,345 + 1 48,685,116 54,398,160 5,713,045 +

Human chromosome 7, length 158431299
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
147 7 416,357 5,502,967 5,086,611 + 5 136,684,982 140,768,185 4,083,204 + 12 11,896,216 16,069,584 4,173,369 -
148 7 5,739,753 6,378,325 638,573 + 5 140,945,783 141,595,559 649,777 - 12 11,044,588 11,682,745 638,158 +
149 7 6,851,792 12,239,386 5,387,595 + 6 7,527,725 13,033,054 5,505,330 + 4 32,962,752 38,857,374 5,894,623 +
150 7 12,290,942 19,431,865 7,140,924 + 12 27,599,484 34,314,350 6,714,867 - 6 51,834,598 59,396,201 7,561,604 -
151 7 19,463,760 22,227,448 2,763,689 + 12 111,793,237 114,462,025 2,668,789 - 6 144,688,125 147,634,182 2,946,058 -
152 7 22,613,444 22,948,635 335,192 + 5 22,013,453 22,335,192 321,740 + 4 6,353,213 6,640,613 287,401 -
153 7 23,001,179 32,792,547 9,791,369 + 6 49,076,445 56,961,892 7,885,448 + 4 77,442,529 86,141,483 8,698,955 +
154 7 32,995,214 36,045,970 3,050,757 + 9 22,444,233 25,502,314 3,058,082 + 8 22,233,831 25,285,755 3,051,925 +
155 7 36,231,162 43,312,412 7,081,251 + 13 13,647,190 20,476,960 6,829,771 - 17 51,435,503 59,283,797 7,848,295 +
156 7 43,633,783 52,886,651 9,252,869 + 11 5,603,595 14,743,872 9,140,278 + 14 86,396,166 95,560,023 9,163,858 +
157 7 52,969,325 53,632,509 663,185 + 11 14,834,428 15,578,468 744,041 - 14 95,672,563 96,364,522 691,960 -
158 7 53,666,521 55,012,415 1,345,895 + 11 15,620,769 17,019,585 1,398,817 + 14 96,400,335 97,829,918 1,429,584 +
159 7 64,823,699 65,887,853 1,064,155 + 5 127,383,766 127,671,737 287,972 + 12 27,299,787 27,620,481 320,695 -
160 7 66,206,267 68,224,573 2,018,307 + 5 130,309,144 131,679,315 1,370,172 - 12 23,664,650 24,877,796 1,213,147 +
161 7 68,400,294 68,818,247 417,954 + 5 129,674,453 130,180,576 506,124 - 12 24,928,436 25,327,618 399,183 -
162 7 68,981,399 71,329,068 2,347,670 + 5 127,769,092 129,513,302 1,744,211 - 12 25,381,433 27,200,639 1,819,207 +
163 7 72,622,447 73,438,242 815,796 + 5 131,948,961 132,575,122 626,162 - 12 22,656,832 23,299,800 642,969 +
164 7 74,763,967 75,742,833 978,867 + 5 133,017,313 133,651,908 634,596 + 12 21,734,255 22,410,082 675,828 -
165 7 76,444,195 84,859,050 8,414,856 + 5 10,782,908 19,489,172 8,706,265 - 4 9,197,417 19,278,514 10,081,098 +
166 7 84,942,485 86,474,973 1,532,489 + 5 3,023,404 4,792,403 1,769,000 + 4 19,395,550 21,421,133 2,025,584 +
167 7 86,573,065 87,043,806 470,742 + 5 4,870,081 5,369,806 499,726 + 4 21,550,622 22,067,165 516,544 -
168 7 87,498,122 92,031,609 4,533,488 + 5 5,874,749 10,505,224 4,630,476 + 4 22,675,969 27,610,862 4,934,894 +
169 7 92,405,911 96,961,183 4,555,273 + 6 3,141,816 7,299,222 4,157,407 + 4 28,240,204 32,770,169 4,529,966 +
170 7 97,265,750 98,816,796 1,551,047 + 5 141,719,409 142,968,282 1,248,874 + 12 9,674,874 10,927,444 1,252,571 -
171 7 99,614,312 99,947,151 332,840 + 5 135,030,806 135,368,015 337,210 - 12 19,519,555 19,854,296 334,742 -
172 7 100,311,617 101,657,001 1,345,385 + 5 133,742,580 134,693,103 950,524 - 12 20,706,771 21,641,780 935,010 +
173 7 101,995,440 104,742,436 2,746,997 + 5 19,610,851 21,958,836 2,347,986 + 4 6,704,476 9,076,360 2,371,885 -
174 7 104,784,146 107,310,403 2,526,258 + 12 25,266,971 27,526,571 2,259,601 - 6 48,978,615 51,728,283 2,749,669 -
175 7 107,361,371 111,468,496 4,107,126 + 12 34,557,567 38,812,902 4,255,336 - 6 59,651,830 63,994,752 4,342,923 -
176 7 111,686,343 149,816,506 38,130,164 + 6 13,057,842 48,877,749 35,819,908 + 4 38,869,653 77,199,199 38,329,547 +
177 7 149,910,114 156,467,816 6,557,703 + 5 22,423,976 27,977,630 5,553,655 + 4 776,169 6,282,623 5,506,455 -
178 7 156,590,793 158,237,917 1,647,125 + 12 110,463,794 111,682,142 1,218,349 - 6 143,356,092 144,580,649 1,224,558 -

Human chromosome 8, length 145908738
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
179 8 571,877 6,763,331 6,191,455 + 8 13,983,750 19,503,052 5,519,303 + 16 75,749,706 80,506,733 4,757,028 -
180 8 7,981,988 9,510,886 1,528,899 + 8 33,716,478 35,112,164 1,395,687 - 16 59,730,293 61,100,500 1,370,208 +
181 8 9,579,292 11,711,299 2,132,008 + 14 53,671,757 55,268,740 1,596,984 - 15 42,327,678 43,989,411 1,661,734 -
182 8 12,355,545 17,763,927 5,408,383 + 8 35,133,433 40,409,168 5,275,736 + 16 54,274,136 59,704,367 5,430,232 -
183 8 18,126,363 19,978,034 1,851,672 + 8 66,569,429 68,203,424 1,633,996 + 16 22,237,236 23,749,019 1,511,784 -
184 8 20,035,898 28,970,491 8,934,594 + 14 55,279,001 62,839,817 7,560,817 - 15 44,001,666 52,965,081 8,963,416 -
185 8 29,011,077 36,483,567 7,472,491 + 8 26,426,100 33,712,012 7,285,913 - 16 61,106,362 68,637,314 7,530,953 +
186 8 36,581,784 37,653,367 1,071,584 + 8 24,939,927 25,955,683 1,015,757 + 16 69,182,804 70,234,453 1,051,650 -
187 8 37,718,833 42,223,832 4,505,000 + 8 21,194,047 24,571,570 3,377,524 - 16 70,628,876 74,196,648 3,567,773 +
188 8 42,433,969 42,795,723 361,755 + 8 24,688,234 24,906,492 218,259 - 16 70,268,601 70,512,015 243,415 +
189 8 48,409,886 49,256,965 847,080 + 16 14,480,675 15,305,473 824,799 - 11 86,992,331 87,777,136 784,806 +
190 8 50,795,836 56,228,085 5,432,250 + 1 3,124,436 9,040,491 5,916,056 - 5 9,822,546 16,611,732 6,789,187 +
191 8 56,386,625 62,410,873 6,024,249 + 4 3,000,603 9,199,460 6,198,858 + 5 16,797,478 23,622,032 6,824,555 +
192 8 62,509,870 63,710,422 1,200,553 + 4 19,690,474 20,982,992 1,292,519 - 5 34,643,392 35,968,602 1,325,211 -
193 8 63,808,494 67,037,320 3,228,827 + 3 15,909,318 19,589,611 3,680,294 + 2 100,801,573 104,904,613 4,103,041 +
194 8 67,089,239 75,849,464 8,760,226 + 1 9,578,355 18,211,767 8,633,413 + 5 108,243 9,290,934 9,182,692 -
195 8 75,921,874 86,714,384 10,792,511 + 3 3,368,448 15,334,734 11,966,287 + 2 87,638,289 100,587,556 12,949,268 -
196 8 86,725,182 96,898,145 10,172,964 + 4 9,248,868 19,630,036 10,381,169 - 5 23,687,095 34,557,653 10,870,559 -
197 8 97,082,832 145,445,749 48,362,918 + 15 32,738,673 77,015,103 44,276,431 + 7 68,218,650 114,866,404 46,647,755 +

Human chromosome 9, length 134505819
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
198 9 199,534 6,648,932 6,449,399 + 19 24,292,016 29,580,187 5,288,172 + 1 228,600,994 234,098,638 5,497,645 +
199 9 6,733,134 27,279,792 20,546,659 + 4 71,561,684 92,865,901 21,304,218 + 5 92,081,228 115,224,643 23,143,416 +
200 9 27,328,761 38,461,949 11,133,189 + 4 34,794,594 44,713,053 9,918,460 + 5 51,627,466 62,374,348 10,746,883 +
201 9 64,601,984 76,321,716 11,719,733 + 19 13,274,208 24,091,020 10,816,813 - 1 217,333,038 228,391,234 11,058,197 -
202 9 76,617,157 79,316,651 2,699,495 + 4 68,166,119 71,181,204 3,015,086 + 5 88,115,669 91,624,140 3,508,472 +
203 9 79,798,087 83,838,619 4,040,533 + 13 57,306,177 59,908,060 2,601,884 + 17 9,650,038 12,431,207 2,781,170 -
204 9 84,333,496 88,142,780 3,809,285 + 13 50,018,251 52,431,532 2,413,282 + 17 17,584,657 20,124,701 2,540,045 -
205 9 88,326,888 90,365,402 2,038,515 + 13 48,023,497 49,246,326 1,222,830 - 17 20,921,471 22,178,850 1,257,380 +
206 9 90,665,223 93,261,925 2,596,703 + 13 61,151,274 62,666,423 1,515,150 + 17 6,284,647 7,817,399 1,532,753 -
207 9 93,496,294 116,942,049 23,445,756 + 4 44,714,846 67,970,291 23,255,446 + 5 62,376,157 87,898,967 25,522,811 +
208 9 117,008,508 121,399,376 4,390,869 + 2 35,204,849 39,927,808 4,722,960 + 3 13,738,020 18,885,501 5,147,482 +
209 9 121,418,936 124,019,216 2,600,281 + 2 32,964,415 35,176,922 2,212,508 - 3 11,554,527 13,703,775 2,149,249 -
210 9 124,556,682 127,750,534 3,193,853 + 2 30,065,956 32,522,069 2,456,114 + 3 8,790,480 11,260,861 2,470,382 +
211 9 127,848,066 129,384,374 1,536,309 + 2 28,768,133 29,974,075 1,205,943 - 3 7,483,815 8,673,909 1,190,095 -
212 9 129,578,196 131,910,565 2,332,370 + 2 27,182,176 28,727,489 1,545,314 + 3 5,814,779 7,452,875 1,638,097 +
213 9 132,031,521 133,048,251 1,016,731 + 2 26,048,829 26,893,512 844,684 + 3 3,969,749 4,809,434 839,686 +
214 9 133,075,029 133,536,097 461,069 + 2 25,527,639 25,950,408 422,770 - 3 3,426,503 3,846,182 419,680 -

Human chromosome 10, length 135480874
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
215 10 148,840 5,951,198 5,802,359 + 13 3,339,657 9,779,968 6,440,312 - 17 71,290,139 77,849,724 6,559,586 +
216 10 6,070,263 15,603,442 9,533,180 + 2 3,038,848 11,779,756 8,740,909 - 17 77,943,505 86,309,459 8,365,955 +
217 10 15,629,198 27,676,319 12,047,122 + 2 11,999,292 23,443,094 11,443,803 + 17 86,342,301 96,799,116 10,456,816 +
218 10 27,821,445 28,911,123 1,089,679 + 18 6,689,575 7,767,388 1,077,814 + 17 63,457,831 64,451,021 993,191 +
219 10 29,101,174 29,809,726 708,553 + 18 3,465,377 4,198,625 733,249 + 17 62,031,439 62,682,636 651,198 -
220 10 29,906,905 30,527,774 620,870 + 18 4,591,516 5,087,541 496,026 - 17 60,914,577 61,426,454 511,878 +
221 10 31,140,226 32,605,919 1,465,694 + 18 5,077,651 6,289,850 1,212,200 + 17 59,656,466 60,926,401 1,269,936 -
222 10 33,361,413 35,324,009 1,962,597 + 8 126,645,193 128,371,181 1,725,989 - 19 56,968,301 58,794,909 1,826,609 -
223 10 35,777,208 37,242,075 1,464,868 + 18 7,968,232 9,440,321 1,472,090 - 17 64,666,235 66,177,993 1,511,759 -
224 10 43,069,022 45,923,816 2,854,795 + 6 116,958,619 119,078,600 2,119,982 - 4 152,682,233 154,953,973 2,271,741 -
225 10 48,317,763 50,944,121 2,626,359 + 14 26,999,594 28,693,627 1,694,034 - 16 7,771,022 9,586,997 1,815,976 -
226 10 51,895,360 52,301,500 406,141 + 19 31,462,941 31,815,381 352,441 + 1 236,227,031 236,574,289 347,259 +
227 10 52,457,316 54,432,489 1,975,174 + 19 29,609,913 31,359,940 1,750,028 - 1 234,127,623 236,123,588 1,995,966 -
228 10 55,222,480 68,032,282 12,809,803 + 10 64,225,049 74,618,825 10,393,777 - 20 14,313,503 25,055,605 10,742,103 +
229 10 68,153,212 70,253,897 2,100,686 + 10 62,532,944 64,143,820 1,610,877 - 20 25,198,173 26,970,456 1,772,284 -
230 10 70,373,329 74,077,273 3,703,945 + 10 59,462,520 62,461,331 2,998,812 - 20 27,155,061 30,053,497 2,898,437 -
231 10 74,765,842 79,567,961 4,802,120 + 14 15,266,933 19,216,341 3,949,409 + 15 83,554 4,263,562 4,180,009 -
232 10 79,643,219 81,143,182 1,499,964 + 14 19,441,986 20,794,298 1,352,313 + 16 15,884 1,399,687 1,383,804 +
233 10 81,820,546 88,990,118 7,169,573 + 14 29,041,918 35,917,083 6,875,166 - 16 9,962,923 17,611,086 7,648,164 -
234 10 89,429,630 98,576,198 9,146,569 + 19 31,919,134 40,650,314 8,731,181 + 1 236,673,679 246,671,582 9,997,904 +
235 10 99,424,005 101,641,400 2,217,396 + 19 41,596,685 43,394,553 1,797,869 + 1 247,180,230 249,098,753 1,918,524 -
236 10 101,972,853 121,296,270 19,323,418 + 19 43,618,464 60,845,321 17,226,858 + 1 249,279,886 267,861,275 18,581,390 +
237 10 121,369,131 135,153,335 13,784,205 + 7 117,084,158 129,122,986 12,038,829 + 1 187,756,532 200,103,782 12,347,251 +

Human chromosome 11, length 134978784
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
238 11 160,539 990,014 829,476 + 7 129,877,966 130,676,751 798,786 - 1 201,164,700 201,994,382 829,683 -
239 11 1,206,762 3,213,050 2,006,289 + 7 130,871,588 132,835,836 1,964,249 + 1 202,119,068 204,327,832 2,208,765 +
240 11 3,590,341 17,356,930 13,766,590 + 7 90,598,672 104,785,895 14,187,224 + 1 159,637,029 174,765,949 15,128,921 +
241 11 17,444,760 25,834,276 8,389,517 + 7 34,740,967 44,216,676 9,475,710 + 1 96,692,072 106,847,594 10,155,523 +
242 11 26,249,523 57,997,764 31,748,242 + 2 85,807,327 112,542,691 26,735,365 - 3 67,614,415 96,454,731 28,840,317 -
243 11 59,436,366 63,041,091 3,604,726 + 19 7,710,960 11,295,835 3,584,876 - 1 211,416,348 215,183,353 3,767,006 -
244 11 63,509,335 64,410,435 901,101 + 19 3,000,979 3,799,071 798,093 - 1 209,648,496 210,505,509 857,014 -
245 11 64,449,185 68,957,204 4,508,020 + 19 3,992,315 7,430,437 3,438,123 + 1 205,946,546 209,633,192 3,686,647 -
246 11 69,027,307 71,432,282 2,404,976 + 7 132,849,040 134,366,746 1,517,707 - 1 204,343,046 205,907,372 1,564,327 -
247 11 71,849,811 88,832,845 16,983,035 + 7 76,194,764 90,597,927 14,403,164 - 1 144,118,833 159,634,866 15,516,034 -
248 11 90,376,592 106,749,257 16,372,666 + 9 3,648,895 17,955,241 14,306,347 - 8 106,015 15,481,325 15,375,311 -
249 11 107,486,944 134,166,024 26,679,081 + 9 26,876,621 54,138,398 27,261,778 - 8 26,631,245 57,488,149 30,856,905 -

Human chromosome 12, length 133464434
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
250 12 269,273 2,668,240 2,398,968 + 6 119,282,160 121,129,332 1,847,173 - 4 155,151,701 157,059,223 1,907,523 -
251 12 3,048,565 8,967,267 5,918,703 + 6 123,276,375 128,996,443 5,720,069 - 4 159,005,521 164,856,142 5,850,622 -
252 12 9,779,502 32,436,969 22,657,468 + 6 130,105,522 149,944,866 19,839,345 + 4 166,762,966 187,319,413 20,556,448 +
253 12 32,535,644 32,897,387 361,744 + 16 15,711,340 16,044,187 332,848 - 11 86,528,220 86,759,607 231,388 +
254 12 33,424,172 54,757,957 21,333,786 + 15 90,108,108 104,046,911 13,938,804 + 7 128,144,387 142,596,940 14,452,554 +
255 12 55,682,419 56,849,072 1,166,654 + 10 128,050,300 129,096,369 1,046,070 - 7 1,319,356 2,393,901 1,074,546 -
256 12 56,991,450 104,255,927 47,264,478 + 10 86,176,440 127,958,839 41,782,400 - 7 23,368,893 67,924,008 44,555,116 -
257 12 104,315,934 108,109,650 3,793,717 + 10 82,232,547 85,460,888 3,228,342 + 7 20,090,998 23,319,788 3,228,791 -
258 12 108,258,446 109,622,896 1,364,451 + 5 110,499,275 111,441,710 942,436 + 12 43,234,914 44,128,289 893,376 -
259 12 110,445,348 121,274,782 10,829,435 + 5 112,128,798 119,957,849 7,829,052 - 12 34,998,549 42,870,185 7,871,637 +
260 12 121,375,734 131,489,706 10,113,973 + 5 119,991,165 126,639,670 6,648,506 + 12 28,363,445 34,963,704 6,600,260 -
261 12 132,727,269 133,050,374 323,106 + 5 107,275,109 107,532,845 257,737 - 12 46,273,668 46,529,324 255,657 +

Human chromosome 13, length 114151656
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
262 13 19,451,963 22,249,828 2,797,866 + 14 47,525,687 49,753,203 2,227,517 + 15 35,892,092 38,160,004 2,267,913 +
263 13 22,591,477 25,566,991 2,975,515 + 14 50,256,619 51,934,000 1,677,382 - 15 38,740,095 40,458,831 1,718,737 -
264 13 26,265,466 33,233,375 6,967,910 + 5 144,402,667 149,717,249 5,314,583 + 12 3,248,897 9,009,620 5,760,724 -
265 13 33,689,468 40,183,355 6,493,888 + 3 52,426,275 57,093,952 4,667,678 - 2 141,072,404 146,068,961 4,996,558 -
266 13 40,981,392 48,715,417 7,734,026 + 14 63,003,465 69,753,585 6,750,121 - 15 53,148,700 60,467,867 7,319,168 -
267 13 49,160,778 51,291,453 2,130,676 + 14 51,965,532 53,604,108 1,638,577 + 15 40,489,121 42,249,880 1,760,760 +
268 13 51,372,956 51,953,227 580,272 + 8 20,709,506 20,993,130 283,625 + 16 74,428,636 74,699,063 270,428 -
269 13 52,180,562 101,898,253 49,717,692 + 14 70,081,431 115,745,414 45,663,984 + 15 60,884,159 109,736,960 48,852,802 +
270 13 102,400,031 114,052,501 11,652,471 + 8 4,843,406 13,819,045 8,975,640 + 16 80,630,764 90,209,460 9,578,697 -

Human chromosome 14, length 105311216
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
271 14 18,720,999 22,936,584 4,215,586 + 14 42,144,047 46,586,117 4,442,071 + 15 26,759,412 34,091,071 7,331,660 +
272 14 23,164,267 50,195,833 27,031,567 + 12 38,897,334 65,541,375 26,644,042 + 6 64,079,402 93,038,464 28,959,063 +
273 14 50,889,077 56,604,691 5,715,615 + 14 36,462,978 41,044,578 4,581,601 + 15 21,025,091 25,696,293 4,671,203 +
274 14 56,715,272 104,044,380 47,329,109 + 12 65,619,090 107,335,391 41,716,302 + 6 93,104,682 138,275,668 45,170,987 +

Human chromosome 15, length 100114055
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
275 15 23,038,689 25,992,278 2,953,590 + 7 44,804,364 48,013,623 3,209,260 - 1 107,544,813 110,860,989 3,316,177 -
276 15 26,827,749 27,946,389 1,118,641 + 7 52,706,485 53,759,995 1,053,511 + 1 119,071,826 120,122,167 1,050,342 +
277 15 28,776,847 29,978,251 1,201,405 + 7 51,239,931 52,426,831 1,186,901 - 1 117,732,376 118,855,777 1,123,402 -
278 15 30,514,905 32,228,869 1,713,965 + 2 113,787,312 115,364,221 1,576,910 - 3 97,988,501 99,569,566 1,581,066 -
279 15 32,521,743 48,876,149 16,354,407 + 2 115,452,537 128,715,036 13,262,500 + 3 99,654,852 114,522,756 14,867,905 +
280 15 48,958,809 49,521,462 562,654 + 9 54,217,602 54,691,825 474,224 + 8 57,563,751 58,063,424 499,674 +
281 15 49,543,963 73,595,971 24,052,009 + 9 57,009,240 75,978,888 18,969,649 - 8 60,613,660 80,544,031 19,930,372 -
282 15 73,683,939 75,356,112 1,672,174 + 9 55,281,802 56,655,217 1,373,416 + 8 58,683,046 60,112,624 1,429,579 +
283 15 75,962,308 76,553,919 591,612 + 9 54,699,326 55,249,080 549,755 + 8 58,075,661 58,659,901 584,241 +
284 15 77,173,781 77,705,398 531,618 + 9 89,038,352 89,505,022 466,671 - 8 94,133,298 94,627,495 494,198 -
285 15 77,875,892 80,141,631 2,265,740 + 7 71,046,448 73,156,970 2,110,523 - 1 138,993,125 141,092,210 2,099,086 -
286 15 80,799,598 82,283,758 1,484,161 + 7 69,695,204 71,014,723 1,319,520 + 1 137,637,433 138,953,028 1,315,596 +
287 15 82,732,309 83,239,600 507,292 + 7 69,203,717 69,660,542 456,826 + 1 136,786,775 137,598,008 811,234 +
288 15 83,446,325 88,394,553 4,948,229 + 7 63,549,999 68,594,808 5,044,810 + 1 131,060,630 136,152,365 5,091,736 +
289 15 88,446,153 88,823,120 376,968 + 7 68,884,394 69,197,810 313,417 - 1 136,594,905 136,915,640 320,736 +
290 15 89,231,219 96,655,398 7,424,180 + 7 56,433,953 63,473,403 7,039,451 - 1 123,137,833 130,962,717 7,824,885 -
291 15 96,673,205 97,158,102 484,898 + 7 55,965,528 56,411,802 446,275 + 1 122,667,969 123,120,312 452,344 +
292 15 97,163,175 99,857,344 2,694,170 + 7 53,768,266 55,960,337 2,192,072 - 1 120,129,216 122,662,516 2,533,301 -

Human chromosome 16, length 89995999
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
293 16 179,003 3,200,090 3,021,088 + 17 22,236,999 24,971,393 2,734,395 - 10 12,817,365 15,551,312 2,733,948 -
294 16 3,294,687 16,092,826 12,798,140 + 16 3,157,693 13,916,651 10,758,959 + 10 489,635 12,067,652 11,578,018 -
295 16 16,787,096 18,094,123 1,307,028 + 7 105,077,935 106,232,454 1,154,520 - 1 175,075,448 176,253,771 1,178,324 -
296 16 18,944,439 19,288,136 343,698 + 7 106,590,543 106,845,630 255,088 - 1 176,661,377 176,933,851 272,475 -
297 16 19,378,683 28,257,918 8,879,236 + 7 106,901,822 115,007,909 8,106,088 + 1 176,983,112 185,512,270 8,529,159 +
298 16 29,659,536 30,155,389 495,854 + 7 115,454,694 115,895,501 440,808 - 1 186,045,714 186,583,575 537,862 -
299 16 30,377,445 31,507,810 1,130,366 + 7 115,925,498 117,011,473 1,085,976 + 1 186,617,506 187,694,318 1,076,813 +
300 16 46,435,928 55,478,033 9,042,106 + 8 84,552,874 92,370,126 7,817,253 + 19 15,102,789 23,164,875 8,062,087 -
301 16 55,614,735 66,697,914 11,083,180 + 8 92,864,168 104,147,795 11,283,628 + 19 268,437 11,943,585 11,675,149 -
302 16 66,758,097 69,711,086 2,952,990 + 8 104,601,822 107,024,313 2,422,492 + 19 34,953,437 37,434,734 2,481,298 +
303 16 69,925,799 73,690,861 3,765,063 + 8 107,381,555 110,659,418 3,277,864 - 19 37,595,579 41,063,714 3,468,136 -
304 16 74,229,322 89,810,196 15,580,875 + 8 110,684,180 123,227,800 12,543,621 + 19 41,090,757 53,862,513 12,771,757 +

Human chromosome 17, length 81691216
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
305 17 36,488 628,402 591,915 + 11 76,576,621 77,019,770 443,150 + 10 63,149,776 63,597,308 447,533 +
306 17 646,230 1,179,725 533,496 + 11 77,033,664 77,505,415 471,752 + 10 67,464,229 67,940,158 475,930 -
307 17 1,201,674 4,482,673 3,281,000 + 11 73,029,312 76,548,028 3,518,717 - 10 59,268,602 63,120,825 3,852,224 -
308 17 4,525,493 6,667,489 2,141,997 + 11 71,052,229 73,019,271 1,967,043 + 10 57,233,946 59,249,137 2,015,192 +
309 17 6,793,483 15,501,847 8,708,365 + 11 63,477,436 70,954,725 7,477,290 - 10 48,996,739 57,146,704 8,149,966 -
310 17 15,759,981 16,415,754 655,774 + 11 62,878,643 63,391,897 513,255 + 10 48,409,472 48,929,089 519,618 +
311 17 16,867,619 18,174,083 1,306,465 + 11 60,267,354 61,311,801 1,044,448 + 10 45,962,124 46,949,109 986,986 +
312 17 18,705,581 19,483,501 777,921 + 11 61,770,055 62,284,937 514,883 - 10 47,415,372 47,938,159 522,788 -
313 17 25,434,935 27,497,674 2,062,740 + 11 78,444,844 80,067,187 1,622,344 - 10 63,711,841 65,479,650 1,767,810 -
314 17 27,569,140 28,698,922 1,129,783 + 11 77,519,846 78,393,247 873,402 - 10 66,507,246 67,450,739 943,494 +
315 17 29,229,416 30,028,269 798,854 + 11 80,092,200 80,708,803 616,604 + 10 65,509,933 66,142,872 632,940 +
316 17 30,313,284 34,274,536 3,961,253 + 11 80,987,549 84,435,817 3,448,269 + 10 68,429,277 71,771,801 3,342,525 +
317 17 34,579,557 35,922,531 1,342,975 + 11 84,567,673 85,689,685 1,122,013 - 10 72,033,624 73,206,414 1,172,791 -
318 17 36,390,195 45,849,646 9,459,452 + 11 98,171,396 105,595,892 7,424,497 + 10 86,073,640 94,127,025 8,053,386 +
319 17 46,019,090 58,283,081 12,263,992 + 11 87,342,438 98,069,770 10,727,333 - 10 74,861,925 85,966,681 11,104,757 -
320 17 58,548,204 60,629,869 2,081,666 + 11 85,709,210 87,230,484 1,521,275 + 10 73,220,725 74,709,887 1,489,163 +
321 17 61,005,260 63,138,270 2,133,011 + 11 106,104,840 107,811,701 1,706,862 + 10 94,666,475 96,338,416 1,671,942 +
322 17 63,431,894 66,409,130 2,977,237 + 11 107,870,093 110,242,065 2,371,973 - 10 96,396,536 99,031,503 2,634,968 -
323 17 67,015,399 81,285,472 14,270,074 + 11 110,534,254 122,372,806 11,838,553 + 10 99,141,339 110,727,299 11,585,961 +

Human chromosome 18, length 77753510
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
324 18 169,391 567,930 398,540 + 18 9,611,845 10,009,349 397,505 - 18 917,776 1,317,876 400,101 -
325 18 921,357 2,458,344 1,536,988 + 17 92,055,073 93,519,361 1,464,289 + 9 111,075,507 112,707,553 1,632,047 -
326 18 2,533,338 9,887,804 7,354,467 + 17 64,073,914 70,060,758 5,986,845 - 9 104,592,565 110,971,638 6,379,074 -
327 18 10,192,723 11,496,201 1,303,479 + 18 63,074,794 64,004,520 929,727 + 18 58,890,181 59,863,972 973,792 +
328 18 11,658,515 13,126,559 1,468,045 + 18 67,483,417 68,318,760 835,344 + 18 63,655,964 64,538,726 882,763 +
329 18 13,274,481 13,912,007 637,527 + 18 68,432,117 68,862,915 430,799 + 18 64,635,287 65,084,493 449,207 -
330 18 18,431,618 40,860,672 22,429,055 + 18 10,068,026 31,793,697 21,725,672 + 18 1,399,656 23,921,740 22,522,085 +
331 18 41,245,003 53,943,062 12,698,060 + 18 68,980,183 80,324,508 11,344,326 - 18 65,149,434 76,964,438 11,815,005 -
332 18 54,053,773 56,683,813 2,630,041 + 18 64,042,903 66,303,701 2,260,799 + 18 59,895,154 62,250,353 2,355,200 +
333 18 56,728,023 57,127,326 399,304 + 18 66,362,656 66,691,216 328,561 + 18 62,302,464 62,638,648 336,185 -
334 18 57,142,503 58,048,268 905,766 + 18 66,705,648 67,435,578 729,931 + 18 62,797,334 63,612,517 815,184 +
335 18 58,149,654 65,223,132 7,073,479 + 1 104,104,741 112,488,480 8,383,740 + 13 9,508,806 19,724,007 10,215,202 +
336 18 66,547,252 75,370,838 8,823,587 + 18 82,171,132 90,596,289 8,425,158 - 18 78,388,638 87,142,842 8,754,205 -
337 18 75,626,508 75,933,747 307,240 + 18 81,727,407 81,964,468 237,062 - 18 78,082,269 78,335,381 253,113 +
338 18 76,469,853 77,740,271 1,270,419 + 18 80,402,094 81,350,235 948,142 - 18 77,015,487 77,948,614 933,128 -

Human chromosome 19, length 63790860
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
339 19 231,274 2,725,701 2,494,428 + 10 79,348,784 80,901,308 1,552,525 + 7 10,128,986 11,694,421 1,565,436 -
340 19 2,917,553 4,111,732 1,194,180 + 10 80,916,060 81,436,260 520,201 - 7 9,581,891 10,114,252 532,362 +
341 19 7,066,495 7,658,705 592,211 + 8 3,064,912 3,652,522 587,611 + 12 2,448,167 3,076,792 628,626 -
342 19 8,261,941 8,626,496 364,556 + 17 32,066,875 32,444,478 377,604 - 7 15,981,681 16,343,949 362,269 -
343 19 9,690,409 11,461,956 1,771,548 + 9 20,395,025 21,957,054 1,562,030 + 8 19,537,168 21,180,238 1,643,071 +
344 19 12,602,657 14,514,587 1,911,931 + 8 82,852,337 84,386,422 1,534,086 - 19 24,716,298 26,258,326 1,542,029 +
345 19 15,151,037 15,500,771 349,735 + 17 30,872,188 31,205,702 333,515 + 7 12,734,605 13,072,931 338,327 +
346 19 16,027,834 16,747,568 719,735 + 8 71,211,701 71,767,717 556,017 + 16 17,670,140 18,126,863 456,724 -
347 19 17,035,421 17,800,438 765,018 + 8 70,322,350 70,771,910 449,561 + 16 18,437,019 18,920,837 483,819 +
348 19 17,675,414 19,619,771 1,944,358 + 8 68,813,131 69,939,902 1,126,772 - 16 19,022,643 20,116,867 1,094,225 +
349 19 33,320,352 33,838,510 518,159 + 7 28,448,450 28,865,566 417,117 - 1 91,152,997 91,617,020 464,024 -
350 19 33,977,159 34,750,606 773,448 + 7 29,042,107 29,856,483 814,377 + 1 91,794,361 92,562,135 767,775 +
351 19 34,780,779 45,981,226 11,200,448 + 7 18,736,910 28,142,816 9,405,907 - 1 82,319,295 90,828,862 8,509,568 -
352 19 46,767,650 47,678,021 910,372 + 7 16,270,615 16,870,156 599,542 + 1 80,228,462 80,810,845 582,384 +
353 19 48,598,055 53,013,826 4,415,772 + 7 10,520,792 16,080,268 5,559,477 - 1 76,274,338 80,025,091 3,750,754 -
354 19 53,477,270 56,770,647 3,293,378 + 7 31,921,959 34,590,682 2,668,724 - 1 93,750,196 96,499,067 2,748,872 -
355 19 60,232,459 61,630,151 1,397,693 + 7 3,804,708 5,644,045 1,839,338 + 1 66,115,566 68,206,728 2,091,163 -

Human chromosome 20, length 63644868
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
356 20 16,324 1,382,340 1,366,017 + 2 153,199,664 154,206,861 1,007,198 - 3 141,716,500 142,743,202 1,026,703 -
357 20 1,695,883 25,502,070 23,806,188 + 2 131,105,578 153,050,431 21,944,854 + 3 116,973,274 141,525,818 24,552,545 +
358 20 30,543,378 63,519,190 32,975,813 + 2 154,213,324 181,216,656 27,003,333 + 3 142,750,090 170,862,470 28,112,381 +

Human chromosome 21, length 46976537
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
359 21 14,457,591 30,875,839 16,418,249 + 16 76,018,121 89,586,530 13,568,410 + 11 14,354,252 28,816,680 14,462,429 +
360 21 31,300,698 32,296,471 995,774 + 16 90,283,549 91,096,366 812,818 + 11 29,507,252 30,335,777 828,526 -
361 21 32,353,187 42,325,105 9,971,919 + 16 91,136,397 98,948,570 7,812,174 + 11 30,523,507 38,030,980 7,507,474 +
362 21 42,385,548 43,961,178 1,575,631 + 17 29,668,636 30,764,596 1,095,961 + 20 9,282,781 10,470,973 1,188,193 +
363 21 44,077,028 46,940,174 2,863,147 + 10 76,005,051 78,214,925 2,209,875 - 20 10,604,594 12,824,924 2,220,331 +

Human chromosome 22, length 49476972
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
364 22 15,953,238 16,880,244 927,007 + 6 121,157,241 121,818,159 660,919 + 4 157,094,460 157,809,693 715,234 +
365 22 17,931,957 18,646,002 714,046 + 16 17,584,634 18,224,340 639,707 - 11 84,273,997 84,920,120 646,124 +
366 22 19,400,119 19,732,326 332,208 + 16 16,765,737 17,044,464 278,728 + 11 85,473,047 85,758,162 285,116 -
367 22 20,127,914 20,650,891 522,978 + 16 16,352,124 16,733,091 380,968 - 11 85,781,435 86,169,644 388,210 +
368 22 23,587,600 23,911,310 323,711 + 5 110,213,444 110,410,003 196,560 - 12 44,221,115 44,421,273 200,159 +
369 22 24,751,034 25,282,575 531,542 + 5 109,412,448 109,808,145 395,698 - 19 14,280,505 14,672,758 392,254 -
370 22 25,714,802 27,480,724 1,765,923 + 5 107,938,789 109,087,670 1,148,882 - 12 44,480,876 45,846,013 1,365,138 +
371 22 27,493,144 30,277,607 2,784,464 + 11 3,045,655 5,419,562 2,373,908 - 14 83,788,781 86,190,282 2,401,502 -
372 22 30,352,686 30,808,636 455,951 + 5 30,994,898 31,397,145 402,248 + 14 83,321,318 83,740,938 419,621 -
373 22 31,134,769 31,692,214 557,446 + 10 85,487,065 85,974,041 486,977 + 7 19,582,302 20,056,709 474,408 -
374 22 32,001,609 34,198,061 2,196,453 + 8 71,894,960 74,328,814 2,433,855 + 19 12,056,454 14,091,525 2,035,072 +
375 22 34,241,298 49,300,491 15,059,194 + 15 77,228,876 89,886,366 12,657,491 + 7 115,099,058 127,908,043 12,808,986 +

Human chromosome X, length 152634166
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
376 X 8,234,095 8,961,984 727,890 + X 61,307,813 62,122,508 814,696 + X 62,648,925 63,422,637 773,713 +
377 X 9,810,046 23,022,644 13,212,599 + X 134,954,594 149,981,448 15,026,855 - X 44,845,158 61,699,872 16,854,715 +
378 X 23,053,152 35,635,295 12,582,144 + X 63,715,742 79,232,200 15,516,459 - X 65,023,306 81,967,380 16,944,075 -
379 X 36,214,931 46,056,474 9,841,544 + X 6,871,662 18,582,352 11,710,691 + X 12,794,796 25,919,627 13,124,832 -
380 X 47,147,582 48,894,422 1,746,841 + X 3,001,442 4,444,364 1,442,923 - X 26,301,840 27,841,997 1,540,158 +
381 X 48,952,800 50,065,892 1,113,093 + X 5,532,812 6,388,034 855,223 - X 28,623,390 29,480,690 857,301 -
382 X 51,762,762 53,447,516 1,684,755 + X 130,695,549 132,215,832 1,520,284 - X 40,110,053 41,881,176 1,771,124 -
383 X 54,082,290 54,921,923 839,634 + X 132,857,488 133,285,781 428,294 + X 38,148,329 38,664,806 516,478 -
384 X 60,800,185 81,290,506 20,490,322 + X 79,805,569 96,416,820 16,611,252 + X 82,635,071 99,842,425 17,207,355 +
385 X 81,349,039 91,417,469 10,068,431 + X 96,519,755 108,471,700 11,951,946 - X 99,866,117 112,836,721 12,970,605 +
386 X 92,456,419 105,353,338 12,896,920 + X 109,600,014 122,777,438 13,177,425 + X 114,406,965 128,855,112 14,448,148 +
387 X 105,444,522 112,094,259 6,649,738 + X 122,955,089 128,920,118 5,965,030 + X 31,106,581 37,529,944 6,423,364 -
388 X 113,983,769 123,820,821 9,837,053 + X 20,070,775 31,236,234 11,165,460 + X 7,420 11,636,571 11,629,152 -
389 X 124,043,077 138,003,617 13,960,541 + X 31,501,165 45,513,870 14,012,706 + X 131,187,437 147,109,361 15,921,925 +
390 X 138,161,195 138,493,164 331,970 + X 45,555,251 45,974,397 419,147 - X 147,139,406 147,425,024 285,619 -
391 X 139,261,979 150,991,936 11,729,958 + X 46,772,273 58,253,966 11,481,694 + X 148,306,181 160,166,354 11,860,174 +

Human chromosome Y, length 50961097
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign

Sorted by order in Mouse

Jump to Mouse chromosome 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, X.

Mouse chromosome 1, length 195869683
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
190 8 50,795,836 56,228,085 5,432,250 + 1 3,124,436 9,040,491 5,916,056 - 5 9,822,546 16,611,732 6,789,187 +
194 8 67,089,239 75,849,464 8,760,226 + 1 9,578,355 18,211,767 8,633,413 + 5 108,243 9,290,934 9,182,692 -
131 6 49,804,425 52,564,568 2,760,144 + 1 18,397,584 21,567,473 3,169,890 + 9 16,972,923 19,990,794 3,017,872 +
133 6 56,226,627 73,852,589 17,625,963 + 1 21,680,833 34,779,214 13,098,382 - 9 20,182,484 33,154,700 12,972,217 -
44 2 131,536,309 131,913,009 376,701 + 1 34,950,982 35,244,289 293,308 + 9 33,327,118 33,607,958 280,841 +
43 2 128,726,070 130,221,309 1,495,240 + 1 35,570,073 36,673,055 1,102,983 - 9 33,991,157 35,179,343 1,188,187 -
36 2 96,631,953 106,298,952 9,667,000 + 1 36,686,489 44,176,943 7,490,455 + 9 35,192,203 42,951,846 7,759,644 +
47 2 189,124,764 190,463,376 1,338,613 + 1 45,003,320 46,460,325 1,457,006 + 9 43,544,320 45,064,183 1,519,864 +
48 2 190,583,916 196,542,303 5,958,388 + 1 47,391,297 53,906,318 6,515,022 - 9 45,174,028 52,204,175 7,030,148 +
49 2 196,928,124 242,694,750 45,766,627 + 1 54,326,643 94,053,582 39,726,940 + 9 52,546,230 93,306,576 40,760,347 +
106 5 98,475,372 98,828,694 353,323 + 1 94,244,380 94,780,051 535,672 + 9 93,472,652 93,981,598 508,947 +
107 5 98,922,797 99,686,335 763,539 + 1 94,794,979 95,281,218 486,240 - 9 94,002,239 94,554,914 552,676 -
108 5 99,770,820 101,656,234 1,885,415 + 1 95,386,472 97,057,266 1,670,795 + 9 94,662,569 96,296,467 1,633,899 +
109 5 101,961,253 102,758,531 797,279 + 1 97,722,109 98,531,657 809,549 - 9 96,888,539 97,555,177 666,639 +
335 18 58,149,654 65,223,132 7,073,479 + 1 104,104,741 112,488,480 8,383,740 + 13 9,508,806 19,724,007 10,215,202 +
41 2 114,345,182 122,364,910 8,019,729 + 1 118,534,026 125,877,578 7,343,553 - 13 30,993,749 38,138,107 7,144,359 -
45 2 133,161,439 138,624,340 5,462,902 + 1 125,901,187 130,650,394 4,749,208 + 13 38,171,256 43,305,081 5,133,826 +
12 1 156,157,255 204,116,087 47,958,833 + 1 130,778,848 173,830,820 43,051,973 - 13 43,402,099 89,483,986 46,081,888 -
20 1 236,519,351 243,221,431 6,702,081 + 1 175,268,471 180,513,949 5,245,479 + 13 90,381,918 95,701,076 5,319,159 +
15 1 222,417,706 224,013,850 1,596,145 + 1 180,540,452 181,748,090 1,207,639 - 13 95,727,982 96,931,919 1,203,938 -
14 1 220,826,336 222,362,416 1,536,081 + 1 181,835,826 182,860,958 1,025,133 + 13 97,053,241 98,302,131 1,248,891 +
13 1 204,247,249 220,748,493 16,501,245 + 1 183,066,795 195,763,487 12,696,693 - 13 98,507,462 111,341,765 12,834,304 -

Mouse chromosome 2, length 181423755
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
216 10 6,070,263 15,603,442 9,533,180 + 2 3,038,848 11,779,756 8,740,909 - 17 77,943,505 86,309,459 8,365,955 +
217 10 15,629,198 27,676,319 12,047,122 + 2 11,999,292 23,443,094 11,443,803 + 17 86,342,301 96,799,116 10,456,816 +
40 2 113,630,811 113,947,918 317,108 + 2 24,434,655 24,744,349 309,695 + 3 2,417,207 2,730,909 313,703 +
214 9 133,075,029 133,536,097 461,069 + 2 25,527,639 25,950,408 422,770 - 3 3,426,503 3,846,182 419,680 -
213 9 132,031,521 133,048,251 1,016,731 + 2 26,048,829 26,893,512 844,684 + 3 3,969,749 4,809,434 839,686 +
212 9 129,578,196 131,910,565 2,332,370 + 2 27,182,176 28,727,489 1,545,314 + 3 5,814,779 7,452,875 1,638,097 +
211 9 127,848,066 129,384,374 1,536,309 + 2 28,768,133 29,974,075 1,205,943 - 3 7,483,815 8,673,909 1,190,095 -
210 9 124,556,682 127,750,534 3,193,853 + 2 30,065,956 32,522,069 2,456,114 + 3 8,790,480 11,260,861 2,470,382 +
209 9 121,418,936 124,019,216 2,600,281 + 2 32,964,415 35,176,922 2,212,508 - 3 11,554,527 13,703,775 2,149,249 -
208 9 117,008,508 121,399,376 4,390,869 + 2 35,204,849 39,927,808 4,722,960 + 3 13,738,020 18,885,501 5,147,482 +
46 2 140,343,444 188,307,563 47,964,120 + 2 40,591,977 85,756,774 45,164,798 + 3 19,786,038 67,560,634 47,774,597 +
242 11 26,249,523 57,997,764 31,748,242 + 2 85,807,327 112,542,691 26,735,365 - 3 67,614,415 96,454,731 28,840,317 -
278 15 30,514,905 32,228,869 1,713,965 + 2 113,787,312 115,364,221 1,576,910 - 3 97,988,501 99,569,566 1,581,066 -
279 15 32,521,743 48,876,149 16,354,407 + 2 115,452,537 128,715,036 13,262,500 + 3 99,654,852 114,522,756 14,867,905 +
35 2 95,153,611 95,526,148 372,538 + 2 129,095,778 129,307,709 211,932 - 3 114,857,818 115,100,933 243,116 -
39 2 111,302,197 113,552,965 2,250,769 + 2 129,447,434 131,058,047 1,610,614 + 3 115,229,933 116,927,667 1,697,735 +
357 20 1,695,883 25,502,070 23,806,188 + 2 131,105,578 153,050,431 21,944,854 + 3 116,973,274 141,525,818 24,552,545 +
356 20 16,324 1,382,340 1,366,017 + 2 153,199,664 154,206,861 1,007,198 - 3 141,716,500 142,743,202 1,026,703 -
358 20 30,543,378 63,519,190 32,975,813 + 2 154,213,324 181,216,656 27,003,333 + 3 142,750,090 170,862,470 28,112,381 +

Mouse chromosome 3, length 160674399
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
195 8 75,921,874 86,714,384 10,792,511 + 3 3,368,448 15,334,734 11,966,287 + 2 87,638,289 100,587,556 12,949,268 -
193 8 63,808,494 67,037,320 3,228,827 + 3 15,909,318 19,589,611 3,680,294 + 2 100,801,573 104,904,613 4,103,041 +
73 3 149,715,846 150,224,969 509,124 + 3 19,671,962 20,070,597 398,636 - 2 105,027,911 105,520,820 492,910 -
78 3 173,196,601 179,505,650 6,309,050 + 3 20,305,662 27,470,783 7,165,122 - 2 105,903,817 113,537,659 7,633,843 -
77 3 171,945,855 173,034,634 1,088,780 + 3 27,612,204 28,646,852 1,034,649 - 2 115,089,831 116,157,085 1,067,255 -
75 3 169,307,966 170,409,406 1,101,441 + 3 28,789,311 29,953,767 1,164,457 + 2 113,637,912 114,965,675 1,327,764 +
76 3 170,471,630 171,919,776 1,448,147 + 3 30,015,913 31,403,750 1,387,838 + 2 116,201,091 117,600,840 1,399,750 -
79 3 179,525,476 184,219,239 4,693,764 + 3 31,457,457 35,853,513 4,396,057 + 2 117,834,988 122,414,497 4,579,510 +
90 4 122,770,111 141,655,864 18,885,754 + 3 36,161,715 52,378,552 16,216,838 + 2 122,730,612 141,017,098 18,286,487 +
265 13 33,689,468 40,183,355 6,493,888 + 3 52,426,275 57,093,952 4,667,678 - 2 141,072,404 146,068,961 4,996,558 -
74 3 150,355,664 169,224,070 18,868,407 + 3 57,499,943 76,895,869 19,395,927 + 2 146,455,282 166,821,107 20,365,826 +
92 4 151,432,923 163,561,645 12,128,723 + 3 76,972,197 87,997,496 11,025,300 - 2 166,916,146 178,919,669 12,003,524 -
11 1 146,529,244 153,896,409 7,367,166 + 3 88,551,101 96,613,838 8,062,738 - 2 179,503,960 191,066,835 11,562,876 -
9 1 143,154,723 143,618,806 464,084 + 3 96,886,172 97,207,979 321,808 + 2 191,312,587 191,642,007 329,421 +
10 1 143,983,899 144,653,633 669,735 + 3 97,307,416 98,003,257 695,842 - 2 191,730,475 192,464,565 734,091 -
8 1 93,262,870 119,662,221 26,399,352 + 3 98,440,166 123,090,061 24,649,896 - 2 192,897,432 219,252,549 26,355,118 -
88 4 95,686,485 121,086,919 25,400,435 + 3 123,171,313 143,108,273 19,936,961 - 2 219,288,313 240,368,485 21,080,173 -
6 1 67,964,958 88,755,488 20,790,531 + 3 143,376,001 160,652,680 17,276,680 - 2 240,829,661 258,118,296 17,288,636 -

Mouse chromosome 4, length 152921959
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
191 8 56,386,625 62,410,873 6,024,249 + 4 3,000,603 9,199,460 6,198,858 + 5 16,797,478 23,622,032 6,824,555 +
196 8 86,725,182 96,898,145 10,172,964 + 4 9,248,868 19,630,036 10,381,169 - 5 23,687,095 34,557,653 10,870,559 -
192 8 62,509,870 63,710,422 1,200,553 + 4 19,690,474 20,982,992 1,292,519 - 5 34,643,392 35,968,602 1,325,211 -
135 6 87,746,118 100,244,557 12,498,440 + 4 21,146,378 34,734,045 13,587,668 - 5 36,128,379 51,549,009 15,420,631 -
200 9 27,328,761 38,461,949 11,133,189 + 4 34,794,594 44,713,053 9,918,460 + 5 51,627,466 62,374,348 10,746,883 +
207 9 93,496,294 116,942,049 23,445,756 + 4 44,714,846 67,970,291 23,255,446 + 5 62,376,157 87,898,967 25,522,811 +
202 9 76,617,157 79,316,651 2,699,495 + 4 68,166,119 71,181,204 3,015,086 + 5 88,115,669 91,624,140 3,508,472 +
199 9 6,733,134 27,279,792 20,546,659 + 4 71,561,684 92,865,901 21,304,218 + 5 92,081,228 115,224,643 23,143,416 +
4 1 58,488,842 66,969,862 8,481,021 + 4 92,892,570 101,289,705 8,397,136 + 5 115,259,111 124,265,993 9,006,883 +
3 1 28,515,209 58,369,437 29,854,229 + 4 101,290,473 130,234,350 28,943,878 - 5 124,266,877 151,153,913 26,887,037 -
2 1 26,124,313 27,828,851 1,704,539 + 4 130,626,312 131,915,486 1,289,175 - 5 151,290,370 152,659,188 1,368,819 +
1 1 1,008,947 26,019,684 25,010,738 + 4 132,039,996 152,701,590 20,661,595 - 5 152,737,306 172,891,838 20,154,533 -

Mouse chromosome 5, length 149719773
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
166 7 84,942,485 86,474,973 1,532,489 + 5 3,023,404 4,792,403 1,769,000 + 4 19,395,550 21,421,133 2,025,584 +
167 7 86,573,065 87,043,806 470,742 + 5 4,870,081 5,369,806 499,726 + 4 21,550,622 22,067,165 516,544 -
168 7 87,498,122 92,031,609 4,533,488 + 5 5,874,749 10,505,224 4,630,476 + 4 22,675,969 27,610,862 4,934,894 +
165 7 76,444,195 84,859,050 8,414,856 + 5 10,782,908 19,489,172 8,706,265 - 4 9,197,417 19,278,514 10,081,098 +
173 7 101,995,440 104,742,436 2,746,997 + 5 19,610,851 21,958,836 2,347,986 + 4 6,704,476 9,076,360 2,371,885 -
152 7 22,613,444 22,948,635 335,192 + 5 22,013,453 22,335,192 321,740 + 4 6,353,213 6,640,613 287,401 -
177 7 149,910,114 156,467,816 6,557,703 + 5 22,423,976 27,977,630 5,553,655 + 4 776,169 6,282,623 5,506,455 -
28 2 26,419,666 28,939,526 2,519,861 + 5 28,367,317 30,687,124 2,319,808 + 6 24,096,423 26,187,652 2,091,230 -
372 22 30,352,686 30,808,636 455,951 + 5 30,994,898 31,397,145 402,248 + 14 83,321,318 83,740,938 419,621 -
84 4 1,525,212 3,792,758 2,267,547 + 5 31,787,970 33,542,816 1,754,847 + 14 81,121,121 82,902,654 1,781,534 -
85 4 4,200,518 8,859,586 4,659,069 + 5 33,728,651 36,651,411 2,922,761 - 14 77,795,153 80,931,046 3,135,894 +
86 4 10,146,763 89,382,043 79,235,281 + 5 37,285,094 101,594,831 64,309,738 + 14 6,355,607 77,358,748 71,003,142 -
7 1 89,320,430 93,175,140 3,854,711 + 5 102,559,569 105,473,748 2,914,180 + 14 2,008,711 5,499,620 3,490,910 -
83 4 483,120 1,099,132 616,013 + 5 105,507,823 105,974,537 466,715 + 14 1,487,418 1,980,786 493,369 -
261 12 132,727,269 133,050,374 323,106 + 5 107,275,109 107,532,845 257,737 - 12 46,273,668 46,529,324 255,657 +
370 22 25,714,802 27,480,724 1,765,923 + 5 107,938,789 109,087,670 1,148,882 - 12 44,480,876 45,846,013 1,365,138 +
369 22 24,751,034 25,282,575 531,542 + 5 109,412,448 109,808,145 395,698 - 19 14,280,505 14,672,758 392,254 -
368 22 23,587,600 23,911,310 323,711 + 5 110,213,444 110,410,003 196,560 - 12 44,221,115 44,421,273 200,159 +
258 12 108,258,446 109,622,896 1,364,451 + 5 110,499,275 111,441,710 942,436 + 12 43,234,914 44,128,289 893,376 -
259 12 110,445,348 121,274,782 10,829,435 + 5 112,128,798 119,957,849 7,829,052 - 12 34,998,549 42,870,185 7,871,637 +
260 12 121,375,734 131,489,706 10,113,973 + 5 119,991,165 126,639,670 6,648,506 + 12 28,363,445 34,963,704 6,600,260 -
159 7 64,823,699 65,887,853 1,064,155 + 5 127,383,766 127,671,737 287,972 + 12 27,299,787 27,620,481 320,695 -
162 7 68,981,399 71,329,068 2,347,670 + 5 127,769,092 129,513,302 1,744,211 - 12 25,381,433 27,200,639 1,819,207 +
161 7 68,400,294 68,818,247 417,954 + 5 129,674,453 130,180,576 506,124 - 12 24,928,436 25,327,618 399,183 -
160 7 66,206,267 68,224,573 2,018,307 + 5 130,309,144 131,679,315 1,370,172 - 12 23,664,650 24,877,796 1,213,147 +
163 7 72,622,447 73,438,242 815,796 + 5 131,948,961 132,575,122 626,162 - 12 22,656,832 23,299,800 642,969 +
164 7 74,763,967 75,742,833 978,867 + 5 133,017,313 133,651,908 634,596 + 12 21,734,255 22,410,082 675,828 -
172 7 100,311,617 101,657,001 1,345,385 + 5 133,742,580 134,693,103 950,524 - 12 20,706,771 21,641,780 935,010 +
171 7 99,614,312 99,947,151 332,840 + 5 135,030,806 135,368,015 337,210 - 12 19,519,555 19,854,296 334,742 -
147 7 416,357 5,502,967 5,086,611 + 5 136,684,982 140,768,185 4,083,204 + 12 11,896,216 16,069,584 4,173,369 -
148 7 5,739,753 6,378,325 638,573 + 5 140,945,783 141,595,559 649,777 - 12 11,044,588 11,682,745 638,158 +
170 7 97,265,750 98,816,796 1,551,047 + 5 141,719,409 142,968,282 1,248,874 + 12 9,674,874 10,927,444 1,252,571 -
264 13 26,265,466 33,233,375 6,967,910 + 5 144,402,667 149,717,249 5,314,583 + 12 3,248,897 9,009,620 5,760,724 -

Mouse chromosome 6, length 149950539
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
169 7 92,405,911 96,961,183 4,555,273 + 6 3,141,816 7,299,222 4,157,407 + 4 28,240,204 32,770,169 4,529,966 +
149 7 6,851,792 12,239,386 5,387,595 + 6 7,527,725 13,033,054 5,505,330 + 4 32,962,752 38,857,374 5,894,623 +
176 7 111,686,343 149,816,506 38,130,164 + 6 13,057,842 48,877,749 35,819,908 + 4 38,869,653 77,199,199 38,329,547 +
153 7 23,001,179 32,792,547 9,791,369 + 6 49,076,445 56,961,892 7,885,448 + 4 77,442,529 86,141,483 8,698,955 +
87 4 89,899,386 95,648,582 5,749,197 + 6 59,025,574 65,450,656 6,425,083 + 4 87,960,959 94,873,819 6,912,861 +
89 4 121,400,033 122,531,907 1,131,875 + 6 65,847,927 66,834,910 986,984 - 4 95,330,871 96,612,525 1,281,655 -
5 1 67,059,806 67,674,317 614,512 + 6 67,189,228 67,743,995 554,768 - 4 96,704,933 97,341,801 636,869 -
34 2 74,013,786 89,030,983 15,017,198 + 6 71,163,962 84,036,296 12,872,335 - 4 104,153,241 118,035,884 13,882,644 -
33 2 71,005,288 73,958,819 2,953,532 + 6 84,119,782 86,452,697 2,332,916 + 4 118,093,921 120,345,149 2,251,229 +
32 2 68,652,539 70,972,655 2,320,117 + 6 86,517,241 88,185,210 1,667,970 - 4 120,402,902 122,093,885 1,690,984 -
70 3 129,916,551 130,317,226 400,676 + 6 88,194,315 88,493,392 299,078 + 4 122,102,044 122,425,945 323,902 +
69 3 127,608,320 129,524,328 1,916,009 + 6 88,702,635 90,213,216 1,510,582 - 4 122,487,154 124,015,409 1,528,256 -
51 3 12,997,408 15,135,116 2,137,709 + 6 91,148,149 92,665,814 1,517,666 + 4 125,137,129 126,642,689 1,505,561 +
64 3 63,878,798 75,092,912 11,214,115 + 6 92,756,116 103,952,939 11,196,824 + 4 126,750,102 138,664,697 11,914,596 +
50 3 452,508 12,864,927 12,412,420 + 6 104,421,326 116,482,938 12,061,613 + 4 139,469,722 152,183,371 12,713,650 +
71 3 130,402,044 130,895,952 493,909 + 6 116,491,951 116,871,019 379,069 + 4 152,191,754 152,564,887 373,134 +
224 10 43,069,022 45,923,816 2,854,795 + 6 116,958,619 119,078,600 2,119,982 - 4 152,682,233 154,953,973 2,271,741 -
250 12 269,273 2,668,240 2,398,968 + 6 119,282,160 121,129,332 1,847,173 - 4 155,151,701 157,059,223 1,907,523 -
364 22 15,953,238 16,880,244 927,007 + 6 121,157,241 121,818,159 660,919 + 4 157,094,460 157,809,693 715,234 +
251 12 3,048,565 8,967,267 5,918,703 + 6 123,276,375 128,996,443 5,720,069 - 4 159,005,521 164,856,142 5,850,622 -
252 12 9,779,502 32,436,969 22,657,468 + 6 130,105,522 149,944,866 19,839,345 + 4 166,762,966 187,319,413 20,556,448 +

Mouse chromosome 7, length 134401573
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
355 19 60,232,459 61,630,151 1,397,693 + 7 3,804,708 5,644,045 1,839,338 + 1 66,115,566 68,206,728 2,091,163 -
353 19 48,598,055 53,013,826 4,415,772 + 7 10,520,792 16,080,268 5,559,477 - 1 76,274,338 80,025,091 3,750,754 -
352 19 46,767,650 47,678,021 910,372 + 7 16,270,615 16,870,156 599,542 + 1 80,228,462 80,810,845 582,384 +
351 19 34,780,779 45,981,226 11,200,448 + 7 18,736,910 28,142,816 9,405,907 - 1 82,319,295 90,828,862 8,509,568 -
349 19 33,320,352 33,838,510 518,159 + 7 28,448,450 28,865,566 417,117 - 1 91,152,997 91,617,020 464,024 -
350 19 33,977,159 34,750,606 773,448 + 7 29,042,107 29,856,483 814,377 + 1 91,794,361 92,562,135 767,775 +
354 19 53,477,270 56,770,647 3,293,378 + 7 31,921,959 34,590,682 2,668,724 - 1 93,750,196 96,499,067 2,748,872 -
241 11 17,444,760 25,834,276 8,389,517 + 7 34,740,967 44,216,676 9,475,710 + 1 96,692,072 106,847,594 10,155,523 +
275 15 23,038,689 25,992,278 2,953,590 + 7 44,804,364 48,013,623 3,209,260 - 1 107,544,813 110,860,989 3,316,177 -
277 15 28,776,847 29,978,251 1,201,405 + 7 51,239,931 52,426,831 1,186,901 - 1 117,732,376 118,855,777 1,123,402 -
276 15 26,827,749 27,946,389 1,118,641 + 7 52,706,485 53,759,995 1,053,511 + 1 119,071,826 120,122,167 1,050,342 +
292 15 97,163,175 99,857,344 2,694,170 + 7 53,768,266 55,960,337 2,192,072 - 1 120,129,216 122,662,516 2,533,301 -
291 15 96,673,205 97,158,102 484,898 + 7 55,965,528 56,411,802 446,275 + 1 122,667,969 123,120,312 452,344 +
290 15 89,231,219 96,655,398 7,424,180 + 7 56,433,953 63,473,403 7,039,451 - 1 123,137,833 130,962,717 7,824,885 -
288 15 83,446,325 88,394,553 4,948,229 + 7 63,549,999 68,594,808 5,044,810 + 1 131,060,630 136,152,365 5,091,736 +
289 15 88,446,153 88,823,120 376,968 + 7 68,884,394 69,197,810 313,417 - 1 136,594,905 136,915,640 320,736 +
287 15 82,732,309 83,239,600 507,292 + 7 69,203,717 69,660,542 456,826 + 1 136,786,775 137,598,008 811,234 +
286 15 80,799,598 82,283,758 1,484,161 + 7 69,695,204 71,014,723 1,319,520 + 1 137,637,433 138,953,028 1,315,596 +
285 15 77,875,892 80,141,631 2,265,740 + 7 71,046,448 73,156,970 2,110,523 - 1 138,993,125 141,092,210 2,099,086 -
247 11 71,849,811 88,832,845 16,983,035 + 7 76,194,764 90,597,927 14,403,164 - 1 144,118,833 159,634,866 15,516,034 -
240 11 3,590,341 17,356,930 13,766,590 + 7 90,598,672 104,785,895 14,187,224 + 1 159,637,029 174,765,949 15,128,921 +
295 16 16,787,096 18,094,123 1,307,028 + 7 105,077,935 106,232,454 1,154,520 - 1 175,075,448 176,253,771 1,178,324 -
296 16 18,944,439 19,288,136 343,698 + 7 106,590,543 106,845,630 255,088 - 1 176,661,377 176,933,851 272,475 -
297 16 19,378,683 28,257,918 8,879,236 + 7 106,901,822 115,007,909 8,106,088 + 1 176,983,112 185,512,270 8,529,159 +
298 16 29,659,536 30,155,389 495,854 + 7 115,454,694 115,895,501 440,808 - 1 186,045,714 186,583,575 537,862 -
299 16 30,377,445 31,507,810 1,130,366 + 7 115,925,498 117,011,473 1,085,976 + 1 186,617,506 187,694,318 1,076,813 +
237 10 121,369,131 135,153,335 13,784,205 + 7 117,084,158 129,122,986 12,038,829 + 1 187,756,532 200,103,782 12,347,251 +
238 11 160,539 990,014 829,476 + 7 129,877,966 130,676,751 798,786 - 1 201,164,700 201,994,382 829,683 -
239 11 1,206,762 3,213,050 2,006,289 + 7 130,871,588 132,835,836 1,964,249 + 1 202,119,068 204,327,832 2,208,765 +
246 11 69,027,307 71,432,282 2,404,976 + 7 132,849,040 134,366,746 1,517,707 - 1 204,343,046 205,907,372 1,564,327 -

Mouse chromosome 8, length 128923138
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
341 19 7,066,495 7,658,705 592,211 + 8 3,064,912 3,652,522 587,611 + 12 2,448,167 3,076,792 628,626 -
270 13 102,400,031 114,052,501 11,652,471 + 8 4,843,406 13,819,045 8,975,640 + 16 80,630,764 90,209,460 9,578,697 -
179 8 571,877 6,763,331 6,191,455 + 8 13,983,750 19,503,052 5,519,303 + 16 75,749,706 80,506,733 4,757,028 -
268 13 51,372,956 51,953,227 580,272 + 8 20,709,506 20,993,130 283,625 + 16 74,428,636 74,699,063 270,428 -
187 8 37,718,833 42,223,832 4,505,000 + 8 21,194,047 24,571,570 3,377,524 - 16 70,628,876 74,196,648 3,567,773 +
188 8 42,433,969 42,795,723 361,755 + 8 24,688,234 24,906,492 218,259 - 16 70,268,601 70,512,015 243,415 +
186 8 36,581,784 37,653,367 1,071,584 + 8 24,939,927 25,955,683 1,015,757 + 16 69,182,804 70,234,453 1,051,650 -
185 8 29,011,077 36,483,567 7,472,491 + 8 26,426,100 33,712,012 7,285,913 - 16 61,106,362 68,637,314 7,530,953 +
180 8 7,981,988 9,510,886 1,528,899 + 8 33,716,478 35,112,164 1,395,687 - 16 59,730,293 61,100,500 1,370,208 +
182 8 12,355,545 17,763,927 5,408,383 + 8 35,133,433 40,409,168 5,275,736 + 16 54,274,136 59,704,367 5,430,232 -
95 4 190,289,343 191,375,700 1,086,358 + 8 40,510,604 41,541,277 1,030,674 - 16 53,049,707 54,185,955 1,136,249 +
94 4 189,885,350 190,209,182 323,833 + 8 41,589,899 41,918,061 328,163 - 16 52,664,787 52,959,427 294,641 -
93 4 163,977,702 189,845,453 25,867,752 + 8 41,961,455 66,363,704 24,402,250 - 16 23,969,512 52,638,044 28,668,533 +
183 8 18,126,363 19,978,034 1,851,672 + 8 66,569,429 68,203,424 1,633,996 + 16 22,237,236 23,749,019 1,511,784 -
348 19 17,675,414 19,619,771 1,944,358 + 8 68,813,131 69,939,902 1,126,772 - 16 19,022,643 20,116,867 1,094,225 +
347 19 17,035,421 17,800,438 765,018 + 8 70,322,350 70,771,910 449,561 + 16 18,437,019 18,920,837 483,819 +
346 19 16,027,834 16,747,568 719,735 + 8 71,211,701 71,767,717 556,017 + 16 17,670,140 18,126,863 456,724 -
374 22 32,001,609 34,198,061 2,196,453 + 8 71,894,960 74,328,814 2,433,855 + 19 12,056,454 14,091,525 2,035,072 +
91 4 141,729,720 151,161,098 9,431,379 + 8 74,629,255 82,733,961 8,104,707 - 19 26,355,591 34,354,680 7,999,090 +
344 19 12,602,657 14,514,587 1,911,931 + 8 82,852,337 84,386,422 1,534,086 - 19 24,716,298 26,258,326 1,542,029 +
300 16 46,435,928 55,478,033 9,042,106 + 8 84,552,874 92,370,126 7,817,253 + 19 15,102,789 23,164,875 8,062,087 -
301 16 55,614,735 66,697,914 11,083,180 + 8 92,864,168 104,147,795 11,283,628 + 19 268,437 11,943,585 11,675,149 -
302 16 66,758,097 69,711,086 2,952,990 + 8 104,601,822 107,024,313 2,422,492 + 19 34,953,437 37,434,734 2,481,298 +
303 16 69,925,799 73,690,861 3,765,063 + 8 107,381,555 110,659,418 3,277,864 - 19 37,595,579 41,063,714 3,468,136 -
304 16 74,229,322 89,810,196 15,580,875 + 8 110,684,180 123,227,800 12,543,621 + 19 41,090,757 53,862,513 12,771,757 +
17 1 225,344,647 230,732,715 5,388,069 + 8 123,324,555 125,925,283 2,600,729 + 19 53,909,835 56,546,928 2,637,094 +
222 10 33,361,413 35,324,009 1,962,597 + 8 126,645,193 128,371,181 1,725,989 - 19 56,968,301 58,794,909 1,826,609 -

Mouse chromosome 9, length 124467299
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
248 11 90,376,592 106,749,257 16,372,666 + 9 3,648,895 17,955,241 14,306,347 - 8 106,015 15,481,325 15,375,311 -
343 19 9,690,409 11,461,956 1,771,548 + 9 20,395,025 21,957,054 1,562,030 + 8 19,537,168 21,180,238 1,643,071 +
154 7 32,995,214 36,045,970 3,050,757 + 9 22,444,233 25,502,314 3,058,082 + 8 22,233,831 25,285,755 3,051,925 +
249 11 107,486,944 134,166,024 26,679,081 + 9 26,876,621 54,138,398 27,261,778 - 8 26,631,245 57,488,149 30,856,905 -
280 15 48,958,809 49,521,462 562,654 + 9 54,217,602 54,691,825 474,224 + 8 57,563,751 58,063,424 499,674 +
283 15 75,962,308 76,553,919 591,612 + 9 54,699,326 55,249,080 549,755 + 8 58,075,661 58,659,901 584,241 +
282 15 73,683,939 75,356,112 1,672,174 + 9 55,281,802 56,655,217 1,373,416 + 8 58,683,046 60,112,624 1,429,579 +
281 15 49,543,963 73,595,971 24,052,009 + 9 57,009,240 75,978,888 18,969,649 - 8 60,613,660 80,544,031 19,930,372 -
132 6 52,834,661 55,782,426 2,947,766 + 9 76,021,028 78,514,375 2,493,348 - 8 80,569,544 83,187,953 2,618,410 -
134 6 74,142,308 86,335,230 12,192,923 + 9 78,812,708 88,920,049 10,107,342 + 8 83,463,262 93,808,463 10,345,202 +
284 15 77,173,781 77,705,398 531,618 + 9 89,038,352 89,505,022 466,671 - 8 94,133,298 94,627,495 494,198 -
72 3 131,213,263 149,354,530 18,141,268 + 9 90,298,116 106,139,750 15,841,635 - 8 95,233,957 111,254,289 16,020,333 -
61 3 46,360,179 52,076,058 5,715,880 + 9 106,365,015 111,107,296 4,742,282 - 8 111,413,457 115,410,217 3,996,761 -
56 3 29,100,141 37,057,695 7,957,555 + 9 111,215,250 117,419,259 6,204,010 - 8 115,511,699 121,913,726 6,402,028 -
55 3 27,613,969 28,957,035 1,343,067 + 9 117,541,959 118,580,740 1,038,782 - 8 122,376,410 123,396,007 1,019,598 -
57 3 37,082,953 42,374,588 5,291,636 + 9 118,599,020 121,941,265 3,342,246 + 8 123,414,478 126,687,360 3,272,883 +
58 3 42,509,183 43,110,210 601,028 + 9 122,045,760 122,381,660 335,901 + 8 126,866,553 127,200,780 334,228 -
59 3 43,191,764 43,620,426 428,663 + 9 122,449,940 122,701,888 251,949 + 8 121,977,073 122,215,418 238,346 +
60 3 43,773,508 46,237,015 2,463,508 + 9 122,806,626 124,433,003 1,626,378 + 8 127,254,039 128,932,780 1,678,742 +

Mouse chromosome 10, length 130738012
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
141 6 150,388,133 154,874,716 4,486,584 + 10 3,225,655 7,134,615 3,908,961 + 1 33,974,084 38,016,899 4,042,816 +
140 6 135,159,846 149,847,823 14,687,978 + 10 7,438,077 21,136,850 13,698,774 - 1 2,438,998 16,775,531 14,336,534 -
139 6 128,297,465 135,126,991 6,829,527 + 10 21,161,982 28,233,846 7,071,865 - 1 17,311,535 24,116,245 6,804,711 +
138 6 123,263,976 127,804,406 4,540,431 + 10 28,828,983 33,358,638 4,529,656 - 1 24,296,408 29,541,572 5,245,165 +
136 6 100,632,494 116,674,803 16,042,310 + 10 33,966,286 51,212,456 17,246,171 - 20 38,615,960 55,288,911 16,672,952 -
137 6 117,056,114 123,081,804 6,025,691 + 10 51,523,123 57,805,391 6,282,269 + 20 30,213,579 36,867,533 6,653,955 +
38 2 108,689,995 109,217,110 527,116 + 10 57,898,031 58,319,703 421,673 + 20 37,093,866 37,523,460 429,595 -
230 10 70,373,329 74,077,273 3,703,945 + 10 59,462,520 62,461,331 2,998,812 - 20 27,155,061 30,053,497 2,898,437 -
229 10 68,153,212 70,253,897 2,100,686 + 10 62,532,944 64,143,820 1,610,877 - 20 25,198,173 26,970,456 1,772,284 -
228 10 55,222,480 68,032,282 12,809,803 + 10 64,225,049 74,618,825 10,393,777 - 20 14,313,503 25,055,605 10,742,103 +
363 21 44,077,028 46,940,174 2,863,147 + 10 76,005,051 78,214,925 2,209,875 - 20 10,604,594 12,824,924 2,220,331 +
339 19 231,274 2,725,701 2,494,428 + 10 79,348,784 80,901,308 1,552,525 + 7 10,128,986 11,694,421 1,565,436 -
340 19 2,917,553 4,111,732 1,194,180 + 10 80,916,060 81,436,260 520,201 - 7 9,581,891 10,114,252 532,362 +
257 12 104,315,934 108,109,650 3,793,717 + 10 82,232,547 85,460,888 3,228,342 + 7 20,090,998 23,319,788 3,228,791 -
373 22 31,134,769 31,692,214 557,446 + 10 85,487,065 85,974,041 486,977 + 7 19,582,302 20,056,709 474,408 -
256 12 56,991,450 104,255,927 47,264,478 + 10 86,176,440 127,958,839 41,782,400 - 7 23,368,893 67,924,008 44,555,116 -
255 12 55,682,419 56,849,072 1,166,654 + 10 128,050,300 129,096,369 1,046,070 - 7 1,319,356 2,393,901 1,074,546 -

Mouse chromosome 11, length 122862689
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
371 22 27,493,144 30,277,607 2,784,464 + 11 3,045,655 5,419,562 2,373,908 - 14 83,788,781 86,190,282 2,401,502 -
156 7 43,633,783 52,886,651 9,252,869 + 11 5,603,595 14,743,872 9,140,278 + 14 86,396,166 95,560,023 9,163,858 +
157 7 52,969,325 53,632,509 663,185 + 11 14,834,428 15,578,468 744,041 - 14 95,672,563 96,364,522 691,960 -
158 7 53,666,521 55,012,415 1,345,895 + 11 15,620,769 17,019,585 1,398,817 + 14 96,400,335 97,829,918 1,429,584 +
31 2 53,899,193 68,650,050 14,750,858 + 11 17,035,064 31,226,099 14,191,036 - 14 97,844,733 112,187,533 14,342,801 -
122 5 172,672,382 173,646,386 974,005 + 11 31,516,525 32,322,987 806,463 + 10 15,724,989 16,533,000 808,012 -
120 5 154,315,022 171,867,674 17,552,653 + 11 32,467,389 49,314,412 16,847,024 - 10 17,131,975 34,051,239 16,919,265 -
125 5 177,571,541 180,131,327 2,559,787 + 11 50,214,395 52,277,718 2,063,324 - 10 35,080,915 37,200,130 2,119,216 -
115 5 130,515,065 134,041,783 3,526,719 + 11 52,329,289 55,469,192 3,139,904 - 10 37,258,867 40,291,554 3,032,688 -
119 5 150,371,650 154,300,804 3,929,155 + 11 55,487,780 58,795,600 3,307,821 + 10 40,310,646 43,809,932 3,499,287 +
16 1 224,305,631 224,949,425 643,795 + 11 59,628,085 60,086,329 458,245 - 10 45,303,454 45,773,540 470,087 -
311 17 16,867,619 18,174,083 1,306,465 + 11 60,267,354 61,311,801 1,044,448 + 10 45,962,124 46,949,109 986,986 +
312 17 18,705,581 19,483,501 777,921 + 11 61,770,055 62,284,937 514,883 - 10 47,415,372 47,938,159 522,788 -
310 17 15,759,981 16,415,754 655,774 + 11 62,878,643 63,391,897 513,255 + 10 48,409,472 48,929,089 519,618 +
309 17 6,793,483 15,501,847 8,708,365 + 11 63,477,436 70,954,725 7,477,290 - 10 48,996,739 57,146,704 8,149,966 -
308 17 4,525,493 6,667,489 2,141,997 + 11 71,052,229 73,019,271 1,967,043 + 10 57,233,946 59,249,137 2,015,192 +
307 17 1,201,674 4,482,673 3,281,000 + 11 73,029,312 76,548,028 3,518,717 - 10 59,268,602 63,120,825 3,852,224 -
305 17 36,488 628,402 591,915 + 11 76,576,621 77,019,770 443,150 + 10 63,149,776 63,597,308 447,533 +
306 17 646,230 1,179,725 533,496 + 11 77,033,664 77,505,415 471,752 + 10 67,464,229 67,940,158 475,930 -
314 17 27,569,140 28,698,922 1,129,783 + 11 77,519,846 78,393,247 873,402 - 10 66,507,246 67,450,739 943,494 +
313 17 25,434,935 27,497,674 2,062,740 + 11 78,444,844 80,067,187 1,622,344 - 10 63,711,841 65,479,650 1,767,810 -
315 17 29,229,416 30,028,269 798,854 + 11 80,092,200 80,708,803 616,604 + 10 65,509,933 66,142,872 632,940 +
316 17 30,313,284 34,274,536 3,961,253 + 11 80,987,549 84,435,817 3,448,269 + 10 68,429,277 71,771,801 3,342,525 +
317 17 34,579,557 35,922,531 1,342,975 + 11 84,567,673 85,689,685 1,122,013 - 10 72,033,624 73,206,414 1,172,791 -
320 17 58,548,204 60,629,869 2,081,666 + 11 85,709,210 87,230,484 1,521,275 + 10 73,220,725 74,709,887 1,489,163 +
319 17 46,019,090 58,283,081 12,263,992 + 11 87,342,438 98,069,770 10,727,333 - 10 74,861,925 85,966,681 11,104,757 -
318 17 36,390,195 45,849,646 9,459,452 + 11 98,171,396 105,595,892 7,424,497 + 10 86,073,640 94,127,025 8,053,386 +
321 17 61,005,260 63,138,270 2,133,011 + 11 106,104,840 107,811,701 1,706,862 + 10 94,666,475 96,338,416 1,671,942 +
322 17 63,431,894 66,409,130 2,977,237 + 11 107,870,093 110,242,065 2,371,973 - 10 96,396,536 99,031,503 2,634,968 -
323 17 67,015,399 81,285,472 14,270,074 + 11 110,534,254 122,372,806 11,838,553 + 10 99,141,339 110,727,299 11,585,961 +

Mouse chromosome 12, length 114462600
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
27 2 10,308,057 26,269,132 15,961,076 + 12 3,138,326 17,875,337 14,737,012 - 6 26,264,436 41,530,905 15,266,470 -
26 2 9,946,222 10,289,678 343,457 + 12 18,562,291 18,826,735 264,445 + 6 42,094,408 42,367,092 272,685 +
25 2 5,185,702 9,162,383 3,976,682 + 12 18,926,859 21,955,069 3,028,211 - 6 42,470,548 45,669,869 3,199,322 -
23 2 3,235,032 4,603,629 1,368,598 + 12 22,034,804 22,781,774 746,971 - 6 45,727,940 46,540,626 812,687 -
24 2 4,739,483 5,096,544 357,062 + 12 22,814,002 23,039,964 225,963 - 6 46,571,003 46,798,333 227,331 -
22 2 1,725,528 3,112,195 1,386,668 + 12 23,109,442 24,141,540 1,032,099 + 6 46,882,304 47,911,777 1,029,474 +
21 2 23,769 1,573,787 1,550,019 + 12 24,214,315 25,218,396 1,004,082 - 6 47,988,544 48,929,150 940,607 -
174 7 104,784,146 107,310,403 2,526,258 + 12 25,266,971 27,526,571 2,259,601 - 6 48,978,615 51,728,283 2,749,669 -
150 7 12,290,942 19,431,865 7,140,924 + 12 27,599,484 34,314,350 6,714,867 - 6 51,834,598 59,396,201 7,561,604 -
175 7 107,361,371 111,468,496 4,107,126 + 12 34,557,567 38,812,902 4,255,336 - 6 59,651,830 63,994,752 4,342,923 -
272 14 23,164,267 50,195,833 27,031,567 + 12 38,897,334 65,541,375 26,644,042 + 6 64,079,402 93,038,464 28,959,063 +
274 14 56,715,272 104,044,380 47,329,109 + 12 65,619,090 107,335,391 41,716,302 + 6 93,104,682 138,275,668 45,170,987 +
178 7 156,590,793 158,237,917 1,647,125 + 12 110,463,794 111,682,142 1,218,349 - 6 143,356,092 144,580,649 1,224,558 -
151 7 19,463,760 22,227,448 2,763,689 + 12 111,793,237 114,462,025 2,668,789 - 6 144,688,125 147,634,182 2,946,058 -

Mouse chromosome 13, length 116242670
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
215 10 148,840 5,951,198 5,802,359 + 13 3,339,657 9,779,968 6,440,312 - 17 71,290,139 77,849,724 6,559,586 +
19 1 232,092,913 236,358,242 4,265,330 + 13 9,879,048 13,212,970 3,333,923 - 17 66,564,886 71,222,372 4,657,487 +
18 1 231,635,074 231,964,196 329,123 + 13 13,372,764 13,615,029 242,266 - 17 59,347,752 59,586,710 238,959 +
155 7 36,231,162 43,312,412 7,081,251 + 13 13,647,190 20,476,960 6,829,771 - 17 51,435,503 59,283,797 7,848,295 +
127 6 20,128,213 29,062,976 8,934,764 + 13 20,581,436 29,723,675 9,142,240 - 17 40,764,556 51,251,891 10,487,336 +
126 6 171,329 20,091,196 19,919,868 + 13 30,005,519 47,975,573 17,970,055 + 17 22,348,024 40,395,386 18,047,363 -
205 9 88,326,888 90,365,402 2,038,515 + 13 48,023,497 49,246,326 1,222,830 - 17 20,921,471 22,178,850 1,257,380 +
204 9 84,333,496 88,142,780 3,809,285 + 13 50,018,251 52,431,532 2,413,282 + 17 17,584,657 20,124,701 2,540,045 -
123 5 173,698,426 174,108,907 410,482 + 13 52,517,696 52,821,131 303,436 - 17 16,952,709 17,261,112 308,404 +
124 5 174,313,895 176,838,415 2,524,521 + 13 52,847,558 54,617,290 1,769,733 + 17 15,190,982 16,927,859 1,736,878 -
116 5 134,110,536 137,121,370 3,010,835 + 13 54,753,961 57,275,131 2,521,171 + 17 12,450,088 15,039,374 2,589,287 -
203 9 79,798,087 83,838,619 4,040,533 + 13 57,306,177 59,908,060 2,601,884 + 17 9,650,038 12,431,207 2,781,170 -
206 9 90,665,223 93,261,925 2,596,703 + 13 61,151,274 62,666,423 1,515,150 + 17 6,284,647 7,817,399 1,532,753 -
97 5 1,799,944 7,932,909 6,132,966 + 13 64,773,898 69,580,216 4,806,319 - 17 25,413 5,117,327 5,091,915 +
96 5 224,246 1,534,470 1,310,225 + 13 69,715,670 70,599,707 884,038 - 1 29,727,672 30,609,467 881,796 +
104 5 87,662,643 96,156,628 8,493,986 + 13 70,895,509 80,422,316 9,526,808 - 2 1,480,962 12,729,471 11,248,510 -
103 5 87,184,707 87,590,723 406,017 + 13 80,503,014 80,948,792 445,779 - 2 12,801,417 13,450,292 648,876 +
102 5 52,944,552 87,136,776 34,192,225 + 13 81,002,138 111,036,378 30,034,241 - 2 13,540,368 45,772,081 32,231,714 -
101 5 52,122,061 52,938,394 816,334 + 13 111,042,524 111,789,213 746,690 - 2 46,309,714 47,127,767 818,054 -
100 5 51,540,216 52,107,535 567,320 + 13 111,800,211 112,244,371 444,161 - 2 45,794,979 46,302,157 507,179 -
99 5 43,487,121 51,536,733 8,049,613 + 13 112,255,387 116,241,531 3,986,145 - 2 47,140,209 51,592,099 4,451,891 -

Mouse chromosome 14, length 115844145
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
63 3 57,800,573 63,864,162 6,063,590 + 14 3,094,324 9,435,424 6,341,101 + 15 12,650,439 19,089,527 6,439,089 -
54 3 22,999,942 27,550,695 4,550,754 + 14 9,829,253 14,339,560 4,510,308 - 15 8,403,218 12,329,152 3,925,935 +
231 10 74,765,842 79,567,961 4,802,120 + 14 15,266,933 19,216,341 3,949,409 + 15 83,554 4,263,562 4,180,009 -
232 10 79,643,219 81,143,182 1,499,964 + 14 19,441,986 20,794,298 1,352,313 + 16 15,884 1,399,687 1,383,804 +
62 3 52,212,642 57,767,106 5,554,465 + 14 21,127,642 26,046,337 4,918,696 - 16 1,708,065 6,750,520 5,042,456 -
52 3 15,239,717 16,285,627 1,045,911 + 14 26,063,083 26,805,429 742,347 + 16 6,784,150 7,536,640 752,491 +
225 10 48,317,763 50,944,121 2,626,359 + 14 26,999,594 28,693,627 1,694,034 - 16 7,771,022 9,586,997 1,815,976 -
233 10 81,820,546 88,990,118 7,169,573 + 14 29,041,918 35,917,083 6,875,166 - 16 9,962,923 17,611,086 7,648,164 -
273 14 50,889,077 56,604,691 5,715,615 + 14 36,462,978 41,044,578 4,581,601 + 15 21,025,091 25,696,293 4,671,203 +
271 14 18,720,999 22,936,584 4,215,586 + 14 42,144,047 46,586,117 4,442,071 + 15 26,759,412 34,091,071 7,331,660 +
262 13 19,451,963 22,249,828 2,797,866 + 14 47,525,687 49,753,203 2,227,517 + 15 35,892,092 38,160,004 2,267,913 +
263 13 22,591,477 25,566,991 2,975,515 + 14 50,256,619 51,934,000 1,677,382 - 15 38,740,095 40,458,831 1,718,737 -
267 13 49,160,778 51,291,453 2,130,676 + 14 51,965,532 53,604,108 1,638,577 + 15 40,489,121 42,249,880 1,760,760 +
181 8 9,579,292 11,711,299 2,132,008 + 14 53,671,757 55,268,740 1,596,984 - 15 42,327,678 43,989,411 1,661,734 -
184 8 20,035,898 28,970,491 8,934,594 + 14 55,279,001 62,839,817 7,560,817 - 15 44,001,666 52,965,081 8,963,416 -
266 13 40,981,392 48,715,417 7,734,026 + 14 63,003,465 69,753,585 6,750,121 - 15 53,148,700 60,467,867 7,319,168 -
269 13 52,180,562 101,898,253 49,717,692 + 14 70,081,431 115,745,414 45,663,984 + 15 60,884,159 109,736,960 48,852,802 +

Mouse chromosome 15, length 104111694
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
98 5 8,988,817 42,875,292 33,886,476 + 15 3,054,929 32,710,661 29,655,733 - 2 52,318,217 85,141,018 32,822,802 -
197 8 97,082,832 145,445,749 48,362,918 + 15 32,738,673 77,015,103 44,276,431 + 7 68,218,650 114,866,404 46,647,755 +
375 22 34,241,298 49,300,491 15,059,194 + 15 77,228,876 89,886,366 12,657,491 + 7 115,099,058 127,908,043 12,808,986 +
254 12 33,424,172 54,757,957 21,333,786 + 15 90,108,108 104,046,911 13,938,804 + 7 128,144,387 142,596,940 14,452,554 +

Mouse chromosome 16, length 98986639
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
294 16 3,294,687 16,092,826 12,798,140 + 16 3,157,693 13,916,651 10,758,959 + 10 489,635 12,067,652 11,578,018 -
189 8 48,409,886 49,256,965 847,080 + 16 14,480,675 15,305,473 824,799 - 11 86,992,331 87,777,136 784,806 +
253 12 32,535,644 32,897,387 361,744 + 16 15,711,340 16,044,187 332,848 - 11 86,528,220 86,759,607 231,388 +
367 22 20,127,914 20,650,891 522,978 + 16 16,352,124 16,733,091 380,968 - 11 85,781,435 86,169,644 388,210 +
366 22 19,400,119 19,732,326 332,208 + 16 16,765,737 17,044,464 278,728 + 11 85,473,047 85,758,162 285,116 -
365 22 17,931,957 18,646,002 714,046 + 16 17,584,634 18,224,340 639,707 - 11 84,273,997 84,920,120 646,124 +
80 3 184,619,216 196,679,051 12,059,836 + 16 19,707,371 31,064,744 11,357,374 + 11 71,368,868 83,309,936 11,941,069 -
81 3 196,836,950 198,725,190 1,888,241 + 16 31,182,838 32,596,172 1,413,335 - 11 69,855,065 71,254,824 1,399,760 +
82 3 198,811,349 199,169,931 358,583 + 16 32,611,252 32,912,851 301,600 + 11 69,536,754 69,838,620 301,867 -
68 3 96,390,755 126,594,916 30,204,162 + 16 32,971,244 61,979,366 29,008,123 - 11 39,591,957 69,475,340 29,883,384 +
67 3 95,899,519 96,339,037 439,519 + 16 62,033,882 62,370,510 336,629 - 11 39,134,329 39,530,971 396,643 -
66 3 95,064,492 95,461,472 396,981 + 16 62,737,116 63,162,247 425,132 - 11 38,216,773 38,643,274 426,502 +
65 3 75,762,301 90,025,409 14,263,109 + 16 63,388,930 75,905,846 12,516,917 - 11 15,615 14,241,004 14,225,390 -
359 21 14,457,591 30,875,839 16,418,249 + 16 76,018,121 89,586,530 13,568,410 + 11 14,354,252 28,816,680 14,462,429 +
360 21 31,300,698 32,296,471 995,774 + 16 90,283,549 91,096,366 812,818 + 11 29,507,252 30,335,777 828,526 -
361 21 32,353,187 42,325,105 9,971,919 + 16 91,136,397 98,948,570 7,812,174 + 11 30,523,507 38,030,980 7,507,474 +

Mouse chromosome 17, length 93529596
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
142 6 155,054,221 158,791,324 3,737,104 + 17 3,003,519 6,062,080 3,058,562 - 1 38,128,249 41,035,436 2,907,188 +
143 6 159,007,266 159,857,341 850,076 + 17 6,261,888 7,242,594 980,707 - 1 41,172,133 41,824,585 652,453 +
145 6 166,685,005 167,000,290 315,286 + 17 6,775,014 6,968,134 193,121 + 1 47,356,448 47,546,634 190,187 -
144 6 160,058,418 166,617,149 6,558,732 + 17 7,381,444 12,077,201 4,695,758 - 1 42,124,363 47,084,789 4,960,427 +
146 6 167,761,130 170,546,805 2,785,676 + 17 12,270,176 14,010,520 1,740,345 + 1 48,685,116 54,398,160 5,713,045 +
105 5 96,514,371 97,930,390 1,416,020 + 17 14,465,634 15,748,267 1,282,634 - 1 54,685,883 55,920,749 1,234,867 -
293 16 179,003 3,200,090 3,021,088 + 17 22,236,999 24,971,393 2,734,395 - 10 12,817,365 15,551,312 2,733,948 -
121 5 171,905,279 172,653,862 748,584 + 17 25,049,044 25,588,115 539,072 + 10 16,555,003 17,104,432 549,430 -
129 6 33,387,532 39,057,666 5,670,135 + 17 25,634,769 29,653,058 4,018,290 + 20 5,175,793 9,265,214 4,089,422 +
362 21 42,385,548 43,961,178 1,575,631 + 17 29,668,636 30,764,596 1,095,961 + 20 9,282,781 10,470,973 1,188,193 +
345 19 15,151,037 15,500,771 349,735 + 17 30,872,188 31,205,702 333,515 + 7 12,734,605 13,072,931 338,327 +
342 19 8,261,941 8,626,496 364,556 + 17 32,066,875 32,444,478 377,604 - 7 15,981,681 16,343,949 362,269 -
128 6 30,574,738 33,298,628 2,723,891 + 17 32,504,226 34,609,513 2,105,288 - 20 2,932,295 5,131,591 2,199,297 +
130 6 39,329,559 49,309,689 9,980,131 + 17 39,339,031 48,167,128 8,828,098 - 9 6,299,472 15,617,051 9,317,580 +
53 3 16,926,804 19,440,118 2,513,315 + 17 48,793,881 51,281,893 2,488,013 + 9 2,076,383 4,866,245 2,789,863 -
37 2 108,028,083 108,416,081 387,999 + 17 52,399,841 52,724,621 324,781 - 9 14,953 411,056 396,104 +
110 5 102,790,626 110,087,796 7,297,171 + 17 57,291,811 63,983,633 6,691,823 + 9 97,590,744 104,509,469 6,918,726 +
326 18 2,533,338 9,887,804 7,354,467 + 17 64,073,914 70,060,758 5,986,845 - 9 104,592,565 110,971,638 6,379,074 -
29 2 29,022,277 35,636,081 6,613,805 + 17 70,095,329 75,803,043 5,707,715 + 6 17,872,982 24,029,711 6,156,730 -
30 2 35,766,488 52,007,641 16,241,154 + 17 75,929,072 90,619,297 14,690,226 + 6 7,200 16,728,941 16,721,742 +
325 18 921,357 2,458,344 1,536,988 + 17 92,055,073 93,519,361 1,464,289 + 9 111,075,507 112,707,553 1,632,047 -

Mouse chromosome 18, length 91041441
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
219 10 29,101,174 29,809,726 708,553 + 18 3,465,377 4,198,625 733,249 + 17 62,031,439 62,682,636 651,198 -
220 10 29,906,905 30,527,774 620,870 + 18 4,591,516 5,087,541 496,026 - 17 60,914,577 61,426,454 511,878 +
221 10 31,140,226 32,605,919 1,465,694 + 18 5,077,651 6,289,850 1,212,200 + 17 59,656,466 60,926,401 1,269,936 -
218 10 27,821,445 28,911,123 1,089,679 + 18 6,689,575 7,767,388 1,077,814 + 17 63,457,831 64,451,021 993,191 +
223 10 35,777,208 37,242,075 1,464,868 + 18 7,968,232 9,440,321 1,472,090 - 17 64,666,235 66,177,993 1,511,759 -
324 18 169,391 567,930 398,540 + 18 9,611,845 10,009,349 397,505 - 18 917,776 1,317,876 400,101 -
330 18 18,431,618 40,860,672 22,429,055 + 18 10,068,026 31,793,697 21,725,672 + 18 1,399,656 23,921,740 22,522,085 +
42 2 127,318,429 128,680,440 1,362,012 + 18 31,927,242 32,840,677 913,436 - 18 24,090,509 25,033,767 943,259 -
111 5 110,330,256 112,300,511 1,970,256 + 18 32,989,872 34,648,856 1,658,985 + 18 25,203,283 26,882,653 1,679,371 +
117 5 137,256,961 147,601,401 10,344,441 + 18 34,675,593 44,363,337 9,687,745 + 18 26,903,401 37,782,702 10,879,302 +
112 5 112,343,444 119,195,956 6,852,513 + 18 44,683,573 50,813,910 6,130,338 + 18 38,087,713 45,661,228 7,573,516 +
113 5 119,237,317 119,681,165 443,849 + 18 50,883,088 51,363,121 480,034 - 18 45,760,134 46,255,712 495,579 -
114 5 119,754,901 130,393,506 10,638,606 + 18 51,387,441 60,551,392 9,163,952 + 18 46,278,042 56,157,207 9,879,166 +
118 5 147,631,363 150,153,185 2,521,823 + 18 60,852,180 62,986,917 2,134,738 - 18 56,505,479 58,810,679 2,305,201 -
327 18 10,192,723 11,496,201 1,303,479 + 18 63,074,794 64,004,520 929,727 + 18 58,890,181 59,863,972 973,792 +
332 18 54,053,773 56,683,813 2,630,041 + 18 64,042,903 66,303,701 2,260,799 + 18 59,895,154 62,250,353 2,355,200 +
333 18 56,728,023 57,127,326 399,304 + 18 66,362,656 66,691,216 328,561 + 18 62,302,464 62,638,648 336,185 -
334 18 57,142,503 58,048,268 905,766 + 18 66,705,648 67,435,578 729,931 + 18 62,797,334 63,612,517 815,184 +
328 18 11,658,515 13,126,559 1,468,045 + 18 67,483,417 68,318,760 835,344 + 18 63,655,964 64,538,726 882,763 +
329 18 13,274,481 13,912,007 637,527 + 18 68,432,117 68,862,915 430,799 + 18 64,635,287 65,084,493 449,207 -
331 18 41,245,003 53,943,062 12,698,060 + 18 68,980,183 80,324,508 11,344,326 - 18 65,149,434 76,964,438 11,815,005 -
338 18 76,469,853 77,740,271 1,270,419 + 18 80,402,094 81,350,235 948,142 - 18 77,015,487 77,948,614 933,128 -
337 18 75,626,508 75,933,747 307,240 + 18 81,727,407 81,964,468 237,062 - 18 78,082,269 78,335,381 253,113 +
336 18 66,547,252 75,370,838 8,823,587 + 18 82,171,132 90,596,289 8,425,158 - 18 78,388,638 87,142,842 8,754,205 -

Mouse chromosome 19, length 61093376
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
244 11 63,509,335 64,410,435 901,101 + 19 3,000,979 3,799,071 798,093 - 1 209,648,496 210,505,509 857,014 -
245 11 64,449,185 68,957,204 4,508,020 + 19 3,992,315 7,430,437 3,438,123 + 1 205,946,546 209,633,192 3,686,647 -
243 11 59,436,366 63,041,091 3,604,726 + 19 7,710,960 11,295,835 3,584,876 - 1 211,416,348 215,183,353 3,767,006 -
201 9 64,601,984 76,321,716 11,719,733 + 19 13,274,208 24,091,020 10,816,813 - 1 217,333,038 228,391,234 11,058,197 -
198 9 199,534 6,648,932 6,449,399 + 19 24,292,016 29,580,187 5,288,172 + 1 228,600,994 234,098,638 5,497,645 +
227 10 52,457,316 54,432,489 1,975,174 + 19 29,609,913 31,359,940 1,750,028 - 1 234,127,623 236,123,588 1,995,966 -
226 10 51,895,360 52,301,500 406,141 + 19 31,462,941 31,815,381 352,441 + 1 236,227,031 236,574,289 347,259 +
234 10 89,429,630 98,576,198 9,146,569 + 19 31,919,134 40,650,314 8,731,181 + 1 236,673,679 246,671,582 9,997,904 +
235 10 99,424,005 101,641,400 2,217,396 + 19 41,596,685 43,394,553 1,797,869 + 1 247,180,230 249,098,753 1,918,524 -
236 10 101,972,853 121,296,270 19,323,418 + 19 43,618,464 60,845,321 17,226,858 + 1 249,279,886 267,861,275 18,581,390 +

Mouse chromosome X, length 149996094
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
380 X 47,147,582 48,894,422 1,746,841 + X 3,001,442 4,444,364 1,442,923 - X 26,301,840 27,841,997 1,540,158 +
381 X 48,952,800 50,065,892 1,113,093 + X 5,532,812 6,388,034 855,223 - X 28,623,390 29,480,690 857,301 -
379 X 36,214,931 46,056,474 9,841,544 + X 6,871,662 18,582,352 11,710,691 + X 12,794,796 25,919,627 13,124,832 -
388 X 113,983,769 123,820,821 9,837,053 + X 20,070,775 31,236,234 11,165,460 + X 7,420 11,636,571 11,629,152 -
389 X 124,043,077 138,003,617 13,960,541 + X 31,501,165 45,513,870 14,012,706 + X 131,187,437 147,109,361 15,921,925 +
390 X 138,161,195 138,493,164 331,970 + X 45,555,251 45,974,397 419,147 - X 147,139,406 147,425,024 285,619 -
391 X 139,261,979 150,991,936 11,729,958 + X 46,772,273 58,253,966 11,481,694 + X 148,306,181 160,166,354 11,860,174 +
376 X 8,234,095 8,961,984 727,890 + X 61,307,813 62,122,508 814,696 + X 62,648,925 63,422,637 773,713 +
378 X 23,053,152 35,635,295 12,582,144 + X 63,715,742 79,232,200 15,516,459 - X 65,023,306 81,967,380 16,944,075 -
384 X 60,800,185 81,290,506 20,490,322 + X 79,805,569 96,416,820 16,611,252 + X 82,635,071 99,842,425 17,207,355 +
385 X 81,349,039 91,417,469 10,068,431 + X 96,519,755 108,471,700 11,951,946 - X 99,866,117 112,836,721 12,970,605 +
386 X 92,456,419 105,353,338 12,896,920 + X 109,600,014 122,777,438 13,177,425 + X 114,406,965 128,855,112 14,448,148 +
387 X 105,444,522 112,094,259 6,649,738 + X 122,955,089 128,920,118 5,965,030 + X 31,106,581 37,529,944 6,423,364 -
382 X 51,762,762 53,447,516 1,684,755 + X 130,695,549 132,215,832 1,520,284 - X 40,110,053 41,881,176 1,771,124 -
383 X 54,082,290 54,921,923 839,634 + X 132,857,488 133,285,781 428,294 + X 38,148,329 38,664,806 516,478 -
377 X 9,810,046 23,022,644 13,212,599 + X 134,954,594 149,981,448 15,026,855 - X 44,845,158 61,699,872 16,854,715 +

Sorted by order in Rat

Jump to Rat chromosome 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, X.

Rat chromosome 1, length 268121971
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
140 6 135,159,846 149,847,823 14,687,978 + 10 7,438,077 21,136,850 13,698,774 - 1 2,438,998 16,775,531 14,336,534 -
139 6 128,297,465 135,126,991 6,829,527 + 10 21,161,982 28,233,846 7,071,865 - 1 17,311,535 24,116,245 6,804,711 +
138 6 123,263,976 127,804,406 4,540,431 + 10 28,828,983 33,358,638 4,529,656 - 1 24,296,408 29,541,572 5,245,165 +
96 5 224,246 1,534,470 1,310,225 + 13 69,715,670 70,599,707 884,038 - 1 29,727,672 30,609,467 881,796 +
141 6 150,388,133 154,874,716 4,486,584 + 10 3,225,655 7,134,615 3,908,961 + 1 33,974,084 38,016,899 4,042,816 +
142 6 155,054,221 158,791,324 3,737,104 + 17 3,003,519 6,062,080 3,058,562 - 1 38,128,249 41,035,436 2,907,188 +
143 6 159,007,266 159,857,341 850,076 + 17 6,261,888 7,242,594 980,707 - 1 41,172,133 41,824,585 652,453 +
144 6 160,058,418 166,617,149 6,558,732 + 17 7,381,444 12,077,201 4,695,758 - 1 42,124,363 47,084,789 4,960,427 +
145 6 166,685,005 167,000,290 315,286 + 17 6,775,014 6,968,134 193,121 + 1 47,356,448 47,546,634 190,187 -
146 6 167,761,130 170,546,805 2,785,676 + 17 12,270,176 14,010,520 1,740,345 + 1 48,685,116 54,398,160 5,713,045 +
105 5 96,514,371 97,930,390 1,416,020 + 17 14,465,634 15,748,267 1,282,634 - 1 54,685,883 55,920,749 1,234,867 -
355 19 60,232,459 61,630,151 1,397,693 + 7 3,804,708 5,644,045 1,839,338 + 1 66,115,566 68,206,728 2,091,163 -
353 19 48,598,055 53,013,826 4,415,772 + 7 10,520,792 16,080,268 5,559,477 - 1 76,274,338 80,025,091 3,750,754 -
352 19 46,767,650 47,678,021 910,372 + 7 16,270,615 16,870,156 599,542 + 1 80,228,462 80,810,845 582,384 +
351 19 34,780,779 45,981,226 11,200,448 + 7 18,736,910 28,142,816 9,405,907 - 1 82,319,295 90,828,862 8,509,568 -
349 19 33,320,352 33,838,510 518,159 + 7 28,448,450 28,865,566 417,117 - 1 91,152,997 91,617,020 464,024 -
350 19 33,977,159 34,750,606 773,448 + 7 29,042,107 29,856,483 814,377 + 1 91,794,361 92,562,135 767,775 +
354 19 53,477,270 56,770,647 3,293,378 + 7 31,921,959 34,590,682 2,668,724 - 1 93,750,196 96,499,067 2,748,872 -
241 11 17,444,760 25,834,276 8,389,517 + 7 34,740,967 44,216,676 9,475,710 + 1 96,692,072 106,847,594 10,155,523 +
275 15 23,038,689 25,992,278 2,953,590 + 7 44,804,364 48,013,623 3,209,260 - 1 107,544,813 110,860,989 3,316,177 -
277 15 28,776,847 29,978,251 1,201,405 + 7 51,239,931 52,426,831 1,186,901 - 1 117,732,376 118,855,777 1,123,402 -
276 15 26,827,749 27,946,389 1,118,641 + 7 52,706,485 53,759,995 1,053,511 + 1 119,071,826 120,122,167 1,050,342 +
292 15 97,163,175 99,857,344 2,694,170 + 7 53,768,266 55,960,337 2,192,072 - 1 120,129,216 122,662,516 2,533,301 -
291 15 96,673,205 97,158,102 484,898 + 7 55,965,528 56,411,802 446,275 + 1 122,667,969 123,120,312 452,344 +
290 15 89,231,219 96,655,398 7,424,180 + 7 56,433,953 63,473,403 7,039,451 - 1 123,137,833 130,962,717 7,824,885 -
288 15 83,446,325 88,394,553 4,948,229 + 7 63,549,999 68,594,808 5,044,810 + 1 131,060,630 136,152,365 5,091,736 +
289 15 88,446,153 88,823,120 376,968 + 7 68,884,394 69,197,810 313,417 - 1 136,594,905 136,915,640 320,736 +
287 15 82,732,309 83,239,600 507,292 + 7 69,203,717 69,660,542 456,826 + 1 136,786,775 137,598,008 811,234 +
286 15 80,799,598 82,283,758 1,484,161 + 7 69,695,204 71,014,723 1,319,520 + 1 137,637,433 138,953,028 1,315,596 +
285 15 77,875,892 80,141,631 2,265,740 + 7 71,046,448 73,156,970 2,110,523 - 1 138,993,125 141,092,210 2,099,086 -
247 11 71,849,811 88,832,845 16,983,035 + 7 76,194,764 90,597,927 14,403,164 - 1 144,118,833 159,634,866 15,516,034 -
240 11 3,590,341 17,356,930 13,766,590 + 7 90,598,672 104,785,895 14,187,224 + 1 159,637,029 174,765,949 15,128,921 +
295 16 16,787,096 18,094,123 1,307,028 + 7 105,077,935 106,232,454 1,154,520 - 1 175,075,448 176,253,771 1,178,324 -
296 16 18,944,439 19,288,136 343,698 + 7 106,590,543 106,845,630 255,088 - 1 176,661,377 176,933,851 272,475 -
297 16 19,378,683 28,257,918 8,879,236 + 7 106,901,822 115,007,909 8,106,088 + 1 176,983,112 185,512,270 8,529,159 +
298 16 29,659,536 30,155,389 495,854 + 7 115,454,694 115,895,501 440,808 - 1 186,045,714 186,583,575 537,862 -
299 16 30,377,445 31,507,810 1,130,366 + 7 115,925,498 117,011,473 1,085,976 + 1 186,617,506 187,694,318 1,076,813 +
237 10 121,369,131 135,153,335 13,784,205 + 7 117,084,158 129,122,986 12,038,829 + 1 187,756,532 200,103,782 12,347,251 +
238 11 160,539 990,014 829,476 + 7 129,877,966 130,676,751 798,786 - 1 201,164,700 201,994,382 829,683 -
239 11 1,206,762 3,213,050 2,006,289 + 7 130,871,588 132,835,836 1,964,249 + 1 202,119,068 204,327,832 2,208,765 +
246 11 69,027,307 71,432,282 2,404,976 + 7 132,849,040 134,366,746 1,517,707 - 1 204,343,046 205,907,372 1,564,327 -
245 11 64,449,185 68,957,204 4,508,020 + 19 3,992,315 7,430,437 3,438,123 + 1 205,946,546 209,633,192 3,686,647 -
244 11 63,509,335 64,410,435 901,101 + 19 3,000,979 3,799,071 798,093 - 1 209,648,496 210,505,509 857,014 -
243 11 59,436,366 63,041,091 3,604,726 + 19 7,710,960 11,295,835 3,584,876 - 1 211,416,348 215,183,353 3,767,006 -
201 9 64,601,984 76,321,716 11,719,733 + 19 13,274,208 24,091,020 10,816,813 - 1 217,333,038 228,391,234 11,058,197 -
198 9 199,534 6,648,932 6,449,399 + 19 24,292,016 29,580,187 5,288,172 + 1 228,600,994 234,098,638 5,497,645 +
227 10 52,457,316 54,432,489 1,975,174 + 19 29,609,913 31,359,940 1,750,028 - 1 234,127,623 236,123,588 1,995,966 -
226 10 51,895,360 52,301,500 406,141 + 19 31,462,941 31,815,381 352,441 + 1 236,227,031 236,574,289 347,259 +
234 10 89,429,630 98,576,198 9,146,569 + 19 31,919,134 40,650,314 8,731,181 + 1 236,673,679 246,671,582 9,997,904 +
235 10 99,424,005 101,641,400 2,217,396 + 19 41,596,685 43,394,553 1,797,869 + 1 247,180,230 249,098,753 1,918,524 -
236 10 101,972,853 121,296,270 19,323,418 + 19 43,618,464 60,845,321 17,226,858 + 1 249,279,886 267,861,275 18,581,390 +

Rat chromosome 2, length 258222147
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
104 5 87,662,643 96,156,628 8,493,986 + 13 70,895,509 80,422,316 9,526,808 - 2 1,480,962 12,729,471 11,248,510 -
103 5 87,184,707 87,590,723 406,017 + 13 80,503,014 80,948,792 445,779 - 2 12,801,417 13,450,292 648,876 +
102 5 52,944,552 87,136,776 34,192,225 + 13 81,002,138 111,036,378 30,034,241 - 2 13,540,368 45,772,081 32,231,714 -
100 5 51,540,216 52,107,535 567,320 + 13 111,800,211 112,244,371 444,161 - 2 45,794,979 46,302,157 507,179 -
101 5 52,122,061 52,938,394 816,334 + 13 111,042,524 111,789,213 746,690 - 2 46,309,714 47,127,767 818,054 -
99 5 43,487,121 51,536,733 8,049,613 + 13 112,255,387 116,241,531 3,986,145 - 2 47,140,209 51,592,099 4,451,891 -
98 5 8,988,817 42,875,292 33,886,476 + 15 3,054,929 32,710,661 29,655,733 - 2 52,318,217 85,141,018 32,822,802 -
195 8 75,921,874 86,714,384 10,792,511 + 3 3,368,448 15,334,734 11,966,287 + 2 87,638,289 100,587,556 12,949,268 -
193 8 63,808,494 67,037,320 3,228,827 + 3 15,909,318 19,589,611 3,680,294 + 2 100,801,573 104,904,613 4,103,041 +
73 3 149,715,846 150,224,969 509,124 + 3 19,671,962 20,070,597 398,636 - 2 105,027,911 105,520,820 492,910 -
78 3 173,196,601 179,505,650 6,309,050 + 3 20,305,662 27,470,783 7,165,122 - 2 105,903,817 113,537,659 7,633,843 -
75 3 169,307,966 170,409,406 1,101,441 + 3 28,789,311 29,953,767 1,164,457 + 2 113,637,912 114,965,675 1,327,764 +
77 3 171,945,855 173,034,634 1,088,780 + 3 27,612,204 28,646,852 1,034,649 - 2 115,089,831 116,157,085 1,067,255 -
76 3 170,471,630 171,919,776 1,448,147 + 3 30,015,913 31,403,750 1,387,838 + 2 116,201,091 117,600,840 1,399,750 -
79 3 179,525,476 184,219,239 4,693,764 + 3 31,457,457 35,853,513 4,396,057 + 2 117,834,988 122,414,497 4,579,510 +
90 4 122,770,111 141,655,864 18,885,754 + 3 36,161,715 52,378,552 16,216,838 + 2 122,730,612 141,017,098 18,286,487 +
265 13 33,689,468 40,183,355 6,493,888 + 3 52,426,275 57,093,952 4,667,678 - 2 141,072,404 146,068,961 4,996,558 -
74 3 150,355,664 169,224,070 18,868,407 + 3 57,499,943 76,895,869 19,395,927 + 2 146,455,282 166,821,107 20,365,826 +
92 4 151,432,923 163,561,645 12,128,723 + 3 76,972,197 87,997,496 11,025,300 - 2 166,916,146 178,919,669 12,003,524 -
11 1 146,529,244 153,896,409 7,367,166 + 3 88,551,101 96,613,838 8,062,738 - 2 179,503,960 191,066,835 11,562,876 -
9 1 143,154,723 143,618,806 464,084 + 3 96,886,172 97,207,979 321,808 + 2 191,312,587 191,642,007 329,421 +
10 1 143,983,899 144,653,633 669,735 + 3 97,307,416 98,003,257 695,842 - 2 191,730,475 192,464,565 734,091 -
8 1 93,262,870 119,662,221 26,399,352 + 3 98,440,166 123,090,061 24,649,896 - 2 192,897,432 219,252,549 26,355,118 -
88 4 95,686,485 121,086,919 25,400,435 + 3 123,171,313 143,108,273 19,936,961 - 2 219,288,313 240,368,485 21,080,173 -
6 1 67,964,958 88,755,488 20,790,531 + 3 143,376,001 160,652,680 17,276,680 - 2 240,829,661 258,118,296 17,288,636 -

Rat chromosome 3, length 170969371
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
40 2 113,630,811 113,947,918 317,108 + 2 24,434,655 24,744,349 309,695 + 3 2,417,207 2,730,909 313,703 +
214 9 133,075,029 133,536,097 461,069 + 2 25,527,639 25,950,408 422,770 - 3 3,426,503 3,846,182 419,680 -
213 9 132,031,521 133,048,251 1,016,731 + 2 26,048,829 26,893,512 844,684 + 3 3,969,749 4,809,434 839,686 +
212 9 129,578,196 131,910,565 2,332,370 + 2 27,182,176 28,727,489 1,545,314 + 3 5,814,779 7,452,875 1,638,097 +
211 9 127,848,066 129,384,374 1,536,309 + 2 28,768,133 29,974,075 1,205,943 - 3 7,483,815 8,673,909 1,190,095 -
210 9 124,556,682 127,750,534 3,193,853 + 2 30,065,956 32,522,069 2,456,114 + 3 8,790,480 11,260,861 2,470,382 +
209 9 121,418,936 124,019,216 2,600,281 + 2 32,964,415 35,176,922 2,212,508 - 3 11,554,527 13,703,775 2,149,249 -
208 9 117,008,508 121,399,376 4,390,869 + 2 35,204,849 39,927,808 4,722,960 + 3 13,738,020 18,885,501 5,147,482 +
46 2 140,343,444 188,307,563 47,964,120 + 2 40,591,977 85,756,774 45,164,798 + 3 19,786,038 67,560,634 47,774,597 +
242 11 26,249,523 57,997,764 31,748,242 + 2 85,807,327 112,542,691 26,735,365 - 3 67,614,415 96,454,731 28,840,317 -
278 15 30,514,905 32,228,869 1,713,965 + 2 113,787,312 115,364,221 1,576,910 - 3 97,988,501 99,569,566 1,581,066 -
279 15 32,521,743 48,876,149 16,354,407 + 2 115,452,537 128,715,036 13,262,500 + 3 99,654,852 114,522,756 14,867,905 +
35 2 95,153,611 95,526,148 372,538 + 2 129,095,778 129,307,709 211,932 - 3 114,857,818 115,100,933 243,116 -
39 2 111,302,197 113,552,965 2,250,769 + 2 129,447,434 131,058,047 1,610,614 + 3 115,229,933 116,927,667 1,697,735 +
357 20 1,695,883 25,502,070 23,806,188 + 2 131,105,578 153,050,431 21,944,854 + 3 116,973,274 141,525,818 24,552,545 +
356 20 16,324 1,382,340 1,366,017 + 2 153,199,664 154,206,861 1,007,198 - 3 141,716,500 142,743,202 1,026,703 -
358 20 30,543,378 63,519,190 32,975,813 + 2 154,213,324 181,216,656 27,003,333 + 3 142,750,090 170,862,470 28,112,381 +

Rat chromosome 4, length 187371129
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
177 7 149,910,114 156,467,816 6,557,703 + 5 22,423,976 27,977,630 5,553,655 + 4 776,169 6,282,623 5,506,455 -
152 7 22,613,444 22,948,635 335,192 + 5 22,013,453 22,335,192 321,740 + 4 6,353,213 6,640,613 287,401 -
173 7 101,995,440 104,742,436 2,746,997 + 5 19,610,851 21,958,836 2,347,986 + 4 6,704,476 9,076,360 2,371,885 -
165 7 76,444,195 84,859,050 8,414,856 + 5 10,782,908 19,489,172 8,706,265 - 4 9,197,417 19,278,514 10,081,098 +
166 7 84,942,485 86,474,973 1,532,489 + 5 3,023,404 4,792,403 1,769,000 + 4 19,395,550 21,421,133 2,025,584 +
167 7 86,573,065 87,043,806 470,742 + 5 4,870,081 5,369,806 499,726 + 4 21,550,622 22,067,165 516,544 -
168 7 87,498,122 92,031,609 4,533,488 + 5 5,874,749 10,505,224 4,630,476 + 4 22,675,969 27,610,862 4,934,894 +
169 7 92,405,911 96,961,183 4,555,273 + 6 3,141,816 7,299,222 4,157,407 + 4 28,240,204 32,770,169 4,529,966 +
149 7 6,851,792 12,239,386 5,387,595 + 6 7,527,725 13,033,054 5,505,330 + 4 32,962,752 38,857,374 5,894,623 +
176 7 111,686,343 149,816,506 38,130,164 + 6 13,057,842 48,877,749 35,819,908 + 4 38,869,653 77,199,199 38,329,547 +
153 7 23,001,179 32,792,547 9,791,369 + 6 49,076,445 56,961,892 7,885,448 + 4 77,442,529 86,141,483 8,698,955 +
87 4 89,899,386 95,648,582 5,749,197 + 6 59,025,574 65,450,656 6,425,083 + 4 87,960,959 94,873,819 6,912,861 +
89 4 121,400,033 122,531,907 1,131,875 + 6 65,847,927 66,834,910 986,984 - 4 95,330,871 96,612,525 1,281,655 -
5 1 67,059,806 67,674,317 614,512 + 6 67,189,228 67,743,995 554,768 - 4 96,704,933 97,341,801 636,869 -
34 2 74,013,786 89,030,983 15,017,198 + 6 71,163,962 84,036,296 12,872,335 - 4 104,153,241 118,035,884 13,882,644 -
33 2 71,005,288 73,958,819 2,953,532 + 6 84,119,782 86,452,697 2,332,916 + 4 118,093,921 120,345,149 2,251,229 +
32 2 68,652,539 70,972,655 2,320,117 + 6 86,517,241 88,185,210 1,667,970 - 4 120,402,902 122,093,885 1,690,984 -
70 3 129,916,551 130,317,226 400,676 + 6 88,194,315 88,493,392 299,078 + 4 122,102,044 122,425,945 323,902 +
69 3 127,608,320 129,524,328 1,916,009 + 6 88,702,635 90,213,216 1,510,582 - 4 122,487,154 124,015,409 1,528,256 -
51 3 12,997,408 15,135,116 2,137,709 + 6 91,148,149 92,665,814 1,517,666 + 4 125,137,129 126,642,689 1,505,561 +
64 3 63,878,798 75,092,912 11,214,115 + 6 92,756,116 103,952,939 11,196,824 + 4 126,750,102 138,664,697 11,914,596 +
50 3 452,508 12,864,927 12,412,420 + 6 104,421,326 116,482,938 12,061,613 + 4 139,469,722 152,183,371 12,713,650 +
71 3 130,402,044 130,895,952 493,909 + 6 116,491,951 116,871,019 379,069 + 4 152,191,754 152,564,887 373,134 +
224 10 43,069,022 45,923,816 2,854,795 + 6 116,958,619 119,078,600 2,119,982 - 4 152,682,233 154,953,973 2,271,741 -
250 12 269,273 2,668,240 2,398,968 + 6 119,282,160 121,129,332 1,847,173 - 4 155,151,701 157,059,223 1,907,523 -
364 22 15,953,238 16,880,244 927,007 + 6 121,157,241 121,818,159 660,919 + 4 157,094,460 157,809,693 715,234 +
251 12 3,048,565 8,967,267 5,918,703 + 6 123,276,375 128,996,443 5,720,069 - 4 159,005,521 164,856,142 5,850,622 -
252 12 9,779,502 32,436,969 22,657,468 + 6 130,105,522 149,944,866 19,839,345 + 4 166,762,966 187,319,413 20,556,448 +

Rat chromosome 5, length 173106704
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
194 8 67,089,239 75,849,464 8,760,226 + 1 9,578,355 18,211,767 8,633,413 + 5 108,243 9,290,934 9,182,692 -
190 8 50,795,836 56,228,085 5,432,250 + 1 3,124,436 9,040,491 5,916,056 - 5 9,822,546 16,611,732 6,789,187 +
191 8 56,386,625 62,410,873 6,024,249 + 4 3,000,603 9,199,460 6,198,858 + 5 16,797,478 23,622,032 6,824,555 +
196 8 86,725,182 96,898,145 10,172,964 + 4 9,248,868 19,630,036 10,381,169 - 5 23,687,095 34,557,653 10,870,559 -
192 8 62,509,870 63,710,422 1,200,553 + 4 19,690,474 20,982,992 1,292,519 - 5 34,643,392 35,968,602 1,325,211 -
135 6 87,746,118 100,244,557 12,498,440 + 4 21,146,378 34,734,045 13,587,668 - 5 36,128,379 51,549,009 15,420,631 -
200 9 27,328,761 38,461,949 11,133,189 + 4 34,794,594 44,713,053 9,918,460 + 5 51,627,466 62,374,348 10,746,883 +
207 9 93,496,294 116,942,049 23,445,756 + 4 44,714,846 67,970,291 23,255,446 + 5 62,376,157 87,898,967 25,522,811 +
202 9 76,617,157 79,316,651 2,699,495 + 4 68,166,119 71,181,204 3,015,086 + 5 88,115,669 91,624,140 3,508,472 +
199 9 6,733,134 27,279,792 20,546,659 + 4 71,561,684 92,865,901 21,304,218 + 5 92,081,228 115,224,643 23,143,416 +
4 1 58,488,842 66,969,862 8,481,021 + 4 92,892,570 101,289,705 8,397,136 + 5 115,259,111 124,265,993 9,006,883 +
3 1 28,515,209 58,369,437 29,854,229 + 4 101,290,473 130,234,350 28,943,878 - 5 124,266,877 151,153,913 26,887,037 -
2 1 26,124,313 27,828,851 1,704,539 + 4 130,626,312 131,915,486 1,289,175 - 5 151,290,370 152,659,188 1,368,819 +
1 1 1,008,947 26,019,684 25,010,738 + 4 132,039,996 152,701,590 20,661,595 - 5 152,737,306 172,891,838 20,154,533 -

Rat chromosome 6, length 147642806
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
30 2 35,766,488 52,007,641 16,241,154 + 17 75,929,072 90,619,297 14,690,226 + 6 7,200 16,728,941 16,721,742 +
29 2 29,022,277 35,636,081 6,613,805 + 17 70,095,329 75,803,043 5,707,715 + 6 17,872,982 24,029,711 6,156,730 -
28 2 26,419,666 28,939,526 2,519,861 + 5 28,367,317 30,687,124 2,319,808 + 6 24,096,423 26,187,652 2,091,230 -
27 2 10,308,057 26,269,132 15,961,076 + 12 3,138,326 17,875,337 14,737,012 - 6 26,264,436 41,530,905 15,266,470 -
26 2 9,946,222 10,289,678 343,457 + 12 18,562,291 18,826,735 264,445 + 6 42,094,408 42,367,092 272,685 +
25 2 5,185,702 9,162,383 3,976,682 + 12 18,926,859 21,955,069 3,028,211 - 6 42,470,548 45,669,869 3,199,322 -
23 2 3,235,032 4,603,629 1,368,598 + 12 22,034,804 22,781,774 746,971 - 6 45,727,940 46,540,626 812,687 -
24 2 4,739,483 5,096,544 357,062 + 12 22,814,002 23,039,964 225,963 - 6 46,571,003 46,798,333 227,331 -
22 2 1,725,528 3,112,195 1,386,668 + 12 23,109,442 24,141,540 1,032,099 + 6 46,882,304 47,911,777 1,029,474 +
21 2 23,769 1,573,787 1,550,019 + 12 24,214,315 25,218,396 1,004,082 - 6 47,988,544 48,929,150 940,607 -
174 7 104,784,146 107,310,403 2,526,258 + 12 25,266,971 27,526,571 2,259,601 - 6 48,978,615 51,728,283 2,749,669 -
150 7 12,290,942 19,431,865 7,140,924 + 12 27,599,484 34,314,350 6,714,867 - 6 51,834,598 59,396,201 7,561,604 -
175 7 107,361,371 111,468,496 4,107,126 + 12 34,557,567 38,812,902 4,255,336 - 6 59,651,830 63,994,752 4,342,923 -
272 14 23,164,267 50,195,833 27,031,567 + 12 38,897,334 65,541,375 26,644,042 + 6 64,079,402 93,038,464 28,959,063 +
274 14 56,715,272 104,044,380 47,329,109 + 12 65,619,090 107,335,391 41,716,302 + 6 93,104,682 138,275,668 45,170,987 +
178 7 156,590,793 158,237,917 1,647,125 + 12 110,463,794 111,682,142 1,218,349 - 6 143,356,092 144,580,649 1,224,558 -
151 7 19,463,760 22,227,448 2,763,689 + 12 111,793,237 114,462,025 2,668,789 - 6 144,688,125 147,634,182 2,946,058 -

Rat chromosome 7, length 143082968
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
255 12 55,682,419 56,849,072 1,166,654 + 10 128,050,300 129,096,369 1,046,070 - 7 1,319,356 2,393,901 1,074,546 -
340 19 2,917,553 4,111,732 1,194,180 + 10 80,916,060 81,436,260 520,201 - 7 9,581,891 10,114,252 532,362 +
339 19 231,274 2,725,701 2,494,428 + 10 79,348,784 80,901,308 1,552,525 + 7 10,128,986 11,694,421 1,565,436 -
345 19 15,151,037 15,500,771 349,735 + 17 30,872,188 31,205,702 333,515 + 7 12,734,605 13,072,931 338,327 +
342 19 8,261,941 8,626,496 364,556 + 17 32,066,875 32,444,478 377,604 - 7 15,981,681 16,343,949 362,269 -
373 22 31,134,769 31,692,214 557,446 + 10 85,487,065 85,974,041 486,977 + 7 19,582,302 20,056,709 474,408 -
257 12 104,315,934 108,109,650 3,793,717 + 10 82,232,547 85,460,888 3,228,342 + 7 20,090,998 23,319,788 3,228,791 -
256 12 56,991,450 104,255,927 47,264,478 + 10 86,176,440 127,958,839 41,782,400 - 7 23,368,893 67,924,008 44,555,116 -
197 8 97,082,832 145,445,749 48,362,918 + 15 32,738,673 77,015,103 44,276,431 + 7 68,218,650 114,866,404 46,647,755 +
375 22 34,241,298 49,300,491 15,059,194 + 15 77,228,876 89,886,366 12,657,491 + 7 115,099,058 127,908,043 12,808,986 +
254 12 33,424,172 54,757,957 21,333,786 + 15 90,108,108 104,046,911 13,938,804 + 7 128,144,387 142,596,940 14,452,554 +

Rat chromosome 8, length 129061546
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
248 11 90,376,592 106,749,257 16,372,666 + 9 3,648,895 17,955,241 14,306,347 - 8 106,015 15,481,325 15,375,311 -
343 19 9,690,409 11,461,956 1,771,548 + 9 20,395,025 21,957,054 1,562,030 + 8 19,537,168 21,180,238 1,643,071 +
154 7 32,995,214 36,045,970 3,050,757 + 9 22,444,233 25,502,314 3,058,082 + 8 22,233,831 25,285,755 3,051,925 +
249 11 107,486,944 134,166,024 26,679,081 + 9 26,876,621 54,138,398 27,261,778 - 8 26,631,245 57,488,149 30,856,905 -
280 15 48,958,809 49,521,462 562,654 + 9 54,217,602 54,691,825 474,224 + 8 57,563,751 58,063,424 499,674 +
283 15 75,962,308 76,553,919 591,612 + 9 54,699,326 55,249,080 549,755 + 8 58,075,661 58,659,901 584,241 +
282 15 73,683,939 75,356,112 1,672,174 + 9 55,281,802 56,655,217 1,373,416 + 8 58,683,046 60,112,624 1,429,579 +
281 15 49,543,963 73,595,971 24,052,009 + 9 57,009,240 75,978,888 18,969,649 - 8 60,613,660 80,544,031 19,930,372 -
132 6 52,834,661 55,782,426 2,947,766 + 9 76,021,028 78,514,375 2,493,348 - 8 80,569,544 83,187,953 2,618,410 -
134 6 74,142,308 86,335,230 12,192,923 + 9 78,812,708 88,920,049 10,107,342 + 8 83,463,262 93,808,463 10,345,202 +
284 15 77,173,781 77,705,398 531,618 + 9 89,038,352 89,505,022 466,671 - 8 94,133,298 94,627,495 494,198 -
72 3 131,213,263 149,354,530 18,141,268 + 9 90,298,116 106,139,750 15,841,635 - 8 95,233,957 111,254,289 16,020,333 -
61 3 46,360,179 52,076,058 5,715,880 + 9 106,365,015 111,107,296 4,742,282 - 8 111,413,457 115,410,217 3,996,761 -
56 3 29,100,141 37,057,695 7,957,555 + 9 111,215,250 117,419,259 6,204,010 - 8 115,511,699 121,913,726 6,402,028 -
59 3 43,191,764 43,620,426 428,663 + 9 122,449,940 122,701,888 251,949 + 8 121,977,073 122,215,418 238,346 +
55 3 27,613,969 28,957,035 1,343,067 + 9 117,541,959 118,580,740 1,038,782 - 8 122,376,410 123,396,007 1,019,598 -
57 3 37,082,953 42,374,588 5,291,636 + 9 118,599,020 121,941,265 3,342,246 + 8 123,414,478 126,687,360 3,272,883 +
58 3 42,509,183 43,110,210 601,028 + 9 122,045,760 122,381,660 335,901 + 8 126,866,553 127,200,780 334,228 -
60 3 43,773,508 46,237,015 2,463,508 + 9 122,806,626 124,433,003 1,626,378 + 8 127,254,039 128,932,780 1,678,742 +

Rat chromosome 9, length 113649943
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
37 2 108,028,083 108,416,081 387,999 + 17 52,399,841 52,724,621 324,781 - 9 14,953 411,056 396,104 +
53 3 16,926,804 19,440,118 2,513,315 + 17 48,793,881 51,281,893 2,488,013 + 9 2,076,383 4,866,245 2,789,863 -
130 6 39,329,559 49,309,689 9,980,131 + 17 39,339,031 48,167,128 8,828,098 - 9 6,299,472 15,617,051 9,317,580 +
131 6 49,804,425 52,564,568 2,760,144 + 1 18,397,584 21,567,473 3,169,890 + 9 16,972,923 19,990,794 3,017,872 +
133 6 56,226,627 73,852,589 17,625,963 + 1 21,680,833 34,779,214 13,098,382 - 9 20,182,484 33,154,700 12,972,217 -
44 2 131,536,309 131,913,009 376,701 + 1 34,950,982 35,244,289 293,308 + 9 33,327,118 33,607,958 280,841 +
43 2 128,726,070 130,221,309 1,495,240 + 1 35,570,073 36,673,055 1,102,983 - 9 33,991,157 35,179,343 1,188,187 -
36 2 96,631,953 106,298,952 9,667,000 + 1 36,686,489 44,176,943 7,490,455 + 9 35,192,203 42,951,846 7,759,644 +
47 2 189,124,764 190,463,376 1,338,613 + 1 45,003,320 46,460,325 1,457,006 + 9 43,544,320 45,064,183 1,519,864 +
48 2 190,583,916 196,542,303 5,958,388 + 1 47,391,297 53,906,318 6,515,022 - 9 45,174,028 52,204,175 7,030,148 +
49 2 196,928,124 242,694,750 45,766,627 + 1 54,326,643 94,053,582 39,726,940 + 9 52,546,230 93,306,576 40,760,347 +
106 5 98,475,372 98,828,694 353,323 + 1 94,244,380 94,780,051 535,672 + 9 93,472,652 93,981,598 508,947 +
107 5 98,922,797 99,686,335 763,539 + 1 94,794,979 95,281,218 486,240 - 9 94,002,239 94,554,914 552,676 -
108 5 99,770,820 101,656,234 1,885,415 + 1 95,386,472 97,057,266 1,670,795 + 9 94,662,569 96,296,467 1,633,899 +
109 5 101,961,253 102,758,531 797,279 + 1 97,722,109 98,531,657 809,549 - 9 96,888,539 97,555,177 666,639 +
110 5 102,790,626 110,087,796 7,297,171 + 17 57,291,811 63,983,633 6,691,823 + 9 97,590,744 104,509,469 6,918,726 +
326 18 2,533,338 9,887,804 7,354,467 + 17 64,073,914 70,060,758 5,986,845 - 9 104,592,565 110,971,638 6,379,074 -
325 18 921,357 2,458,344 1,536,988 + 17 92,055,073 93,519,361 1,464,289 + 9 111,075,507 112,707,553 1,632,047 -

Rat chromosome 10, length 110733352
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
294 16 3,294,687 16,092,826 12,798,140 + 16 3,157,693 13,916,651 10,758,959 + 10 489,635 12,067,652 11,578,018 -
293 16 179,003 3,200,090 3,021,088 + 17 22,236,999 24,971,393 2,734,395 - 10 12,817,365 15,551,312 2,733,948 -
122 5 172,672,382 173,646,386 974,005 + 11 31,516,525 32,322,987 806,463 + 10 15,724,989 16,533,000 808,012 -
121 5 171,905,279 172,653,862 748,584 + 17 25,049,044 25,588,115 539,072 + 10 16,555,003 17,104,432 549,430 -
120 5 154,315,022 171,867,674 17,552,653 + 11 32,467,389 49,314,412 16,847,024 - 10 17,131,975 34,051,239 16,919,265 -
125 5 177,571,541 180,131,327 2,559,787 + 11 50,214,395 52,277,718 2,063,324 - 10 35,080,915 37,200,130 2,119,216 -
115 5 130,515,065 134,041,783 3,526,719 + 11 52,329,289 55,469,192 3,139,904 - 10 37,258,867 40,291,554 3,032,688 -
119 5 150,371,650 154,300,804 3,929,155 + 11 55,487,780 58,795,600 3,307,821 + 10 40,310,646 43,809,932 3,499,287 +
16 1 224,305,631 224,949,425 643,795 + 11 59,628,085 60,086,329 458,245 - 10 45,303,454 45,773,540 470,087 -
311 17 16,867,619 18,174,083 1,306,465 + 11 60,267,354 61,311,801 1,044,448 + 10 45,962,124 46,949,109 986,986 +
312 17 18,705,581 19,483,501 777,921 + 11 61,770,055 62,284,937 514,883 - 10 47,415,372 47,938,159 522,788 -
310 17 15,759,981 16,415,754 655,774 + 11 62,878,643 63,391,897 513,255 + 10 48,409,472 48,929,089 519,618 +
309 17 6,793,483 15,501,847 8,708,365 + 11 63,477,436 70,954,725 7,477,290 - 10 48,996,739 57,146,704 8,149,966 -
308 17 4,525,493 6,667,489 2,141,997 + 11 71,052,229 73,019,271 1,967,043 + 10 57,233,946 59,249,137 2,015,192 +
307 17 1,201,674 4,482,673 3,281,000 + 11 73,029,312 76,548,028 3,518,717 - 10 59,268,602 63,120,825 3,852,224 -
305 17 36,488 628,402 591,915 + 11 76,576,621 77,019,770 443,150 + 10 63,149,776 63,597,308 447,533 +
313 17 25,434,935 27,497,674 2,062,740 + 11 78,444,844 80,067,187 1,622,344 - 10 63,711,841 65,479,650 1,767,810 -
315 17 29,229,416 30,028,269 798,854 + 11 80,092,200 80,708,803 616,604 + 10 65,509,933 66,142,872 632,940 +
314 17 27,569,140 28,698,922 1,129,783 + 11 77,519,846 78,393,247 873,402 - 10 66,507,246 67,450,739 943,494 +
306 17 646,230 1,179,725 533,496 + 11 77,033,664 77,505,415 471,752 + 10 67,464,229 67,940,158 475,930 -
316 17 30,313,284 34,274,536 3,961,253 + 11 80,987,549 84,435,817 3,448,269 + 10 68,429,277 71,771,801 3,342,525 +
317 17 34,579,557 35,922,531 1,342,975 + 11 84,567,673 85,689,685 1,122,013 - 10 72,033,624 73,206,414 1,172,791 -
320 17 58,548,204 60,629,869 2,081,666 + 11 85,709,210 87,230,484 1,521,275 + 10 73,220,725 74,709,887 1,489,163 +
319 17 46,019,090 58,283,081 12,263,992 + 11 87,342,438 98,069,770 10,727,333 - 10 74,861,925 85,966,681 11,104,757 -
318 17 36,390,195 45,849,646 9,459,452 + 11 98,171,396 105,595,892 7,424,497 + 10 86,073,640 94,127,025 8,053,386 +
321 17 61,005,260 63,138,270 2,133,011 + 11 106,104,840 107,811,701 1,706,862 + 10 94,666,475 96,338,416 1,671,942 +
322 17 63,431,894 66,409,130 2,977,237 + 11 107,870,093 110,242,065 2,371,973 - 10 96,396,536 99,031,503 2,634,968 -
323 17 67,015,399 81,285,472 14,270,074 + 11 110,534,254 122,372,806 11,838,553 + 10 99,141,339 110,727,299 11,585,961 +

Rat chromosome 11, length 87800381
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
65 3 75,762,301 90,025,409 14,263,109 + 16 63,388,930 75,905,846 12,516,917 - 11 15,615 14,241,004 14,225,390 -
359 21 14,457,591 30,875,839 16,418,249 + 16 76,018,121 89,586,530 13,568,410 + 11 14,354,252 28,816,680 14,462,429 +
360 21 31,300,698 32,296,471 995,774 + 16 90,283,549 91,096,366 812,818 + 11 29,507,252 30,335,777 828,526 -
361 21 32,353,187 42,325,105 9,971,919 + 16 91,136,397 98,948,570 7,812,174 + 11 30,523,507 38,030,980 7,507,474 +
66 3 95,064,492 95,461,472 396,981 + 16 62,737,116 63,162,247 425,132 - 11 38,216,773 38,643,274 426,502 +
67 3 95,899,519 96,339,037 439,519 + 16 62,033,882 62,370,510 336,629 - 11 39,134,329 39,530,971 396,643 -
68 3 96,390,755 126,594,916 30,204,162 + 16 32,971,244 61,979,366 29,008,123 - 11 39,591,957 69,475,340 29,883,384 +
82 3 198,811,349 199,169,931 358,583 + 16 32,611,252 32,912,851 301,600 + 11 69,536,754 69,838,620 301,867 -
81 3 196,836,950 198,725,190 1,888,241 + 16 31,182,838 32,596,172 1,413,335 - 11 69,855,065 71,254,824 1,399,760 +
80 3 184,619,216 196,679,051 12,059,836 + 16 19,707,371 31,064,744 11,357,374 + 11 71,368,868 83,309,936 11,941,069 -
365 22 17,931,957 18,646,002 714,046 + 16 17,584,634 18,224,340 639,707 - 11 84,273,997 84,920,120 646,124 +
366 22 19,400,119 19,732,326 332,208 + 16 16,765,737 17,044,464 278,728 + 11 85,473,047 85,758,162 285,116 -
367 22 20,127,914 20,650,891 522,978 + 16 16,352,124 16,733,091 380,968 - 11 85,781,435 86,169,644 388,210 +
253 12 32,535,644 32,897,387 361,744 + 16 15,711,340 16,044,187 332,848 - 11 86,528,220 86,759,607 231,388 +
189 8 48,409,886 49,256,965 847,080 + 16 14,480,675 15,305,473 824,799 - 11 86,992,331 87,777,136 784,806 +

Rat chromosome 12, length 46649226
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
341 19 7,066,495 7,658,705 592,211 + 8 3,064,912 3,652,522 587,611 + 12 2,448,167 3,076,792 628,626 -
264 13 26,265,466 33,233,375 6,967,910 + 5 144,402,667 149,717,249 5,314,583 + 12 3,248,897 9,009,620 5,760,724 -
170 7 97,265,750 98,816,796 1,551,047 + 5 141,719,409 142,968,282 1,248,874 + 12 9,674,874 10,927,444 1,252,571 -
148 7 5,739,753 6,378,325 638,573 + 5 140,945,783 141,595,559 649,777 - 12 11,044,588 11,682,745 638,158 +
147 7 416,357 5,502,967 5,086,611 + 5 136,684,982 140,768,185 4,083,204 + 12 11,896,216 16,069,584 4,173,369 -
171 7 99,614,312 99,947,151 332,840 + 5 135,030,806 135,368,015 337,210 - 12 19,519,555 19,854,296 334,742 -
172 7 100,311,617 101,657,001 1,345,385 + 5 133,742,580 134,693,103 950,524 - 12 20,706,771 21,641,780 935,010 +
164 7 74,763,967 75,742,833 978,867 + 5 133,017,313 133,651,908 634,596 + 12 21,734,255 22,410,082 675,828 -
163 7 72,622,447 73,438,242 815,796 + 5 131,948,961 132,575,122 626,162 - 12 22,656,832 23,299,800 642,969 +
160 7 66,206,267 68,224,573 2,018,307 + 5 130,309,144 131,679,315 1,370,172 - 12 23,664,650 24,877,796 1,213,147 +
161 7 68,400,294 68,818,247 417,954 + 5 129,674,453 130,180,576 506,124 - 12 24,928,436 25,327,618 399,183 -
162 7 68,981,399 71,329,068 2,347,670 + 5 127,769,092 129,513,302 1,744,211 - 12 25,381,433 27,200,639 1,819,207 +
159 7 64,823,699 65,887,853 1,064,155 + 5 127,383,766 127,671,737 287,972 + 12 27,299,787 27,620,481 320,695 -
260 12 121,375,734 131,489,706 10,113,973 + 5 119,991,165 126,639,670 6,648,506 + 12 28,363,445 34,963,704 6,600,260 -
259 12 110,445,348 121,274,782 10,829,435 + 5 112,128,798 119,957,849 7,829,052 - 12 34,998,549 42,870,185 7,871,637 +
258 12 108,258,446 109,622,896 1,364,451 + 5 110,499,275 111,441,710 942,436 + 12 43,234,914 44,128,289 893,376 -
368 22 23,587,600 23,911,310 323,711 + 5 110,213,444 110,410,003 196,560 - 12 44,221,115 44,421,273 200,159 +
370 22 25,714,802 27,480,724 1,765,923 + 5 107,938,789 109,087,670 1,148,882 - 12 44,480,876 45,846,013 1,365,138 +
261 12 132,727,269 133,050,374 323,106 + 5 107,275,109 107,532,845 257,737 - 12 46,273,668 46,529,324 255,657 +

Rat chromosome 13, length 111348958
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
335 18 58,149,654 65,223,132 7,073,479 + 1 104,104,741 112,488,480 8,383,740 + 13 9,508,806 19,724,007 10,215,202 +
41 2 114,345,182 122,364,910 8,019,729 + 1 118,534,026 125,877,578 7,343,553 - 13 30,993,749 38,138,107 7,144,359 -
45 2 133,161,439 138,624,340 5,462,902 + 1 125,901,187 130,650,394 4,749,208 + 13 38,171,256 43,305,081 5,133,826 +
12 1 156,157,255 204,116,087 47,958,833 + 1 130,778,848 173,830,820 43,051,973 - 13 43,402,099 89,483,986 46,081,888 -
20 1 236,519,351 243,221,431 6,702,081 + 1 175,268,471 180,513,949 5,245,479 + 13 90,381,918 95,701,076 5,319,159 +
15 1 222,417,706 224,013,850 1,596,145 + 1 180,540,452 181,748,090 1,207,639 - 13 95,727,982 96,931,919 1,203,938 -
14 1 220,826,336 222,362,416 1,536,081 + 1 181,835,826 182,860,958 1,025,133 + 13 97,053,241 98,302,131 1,248,891 +
13 1 204,247,249 220,748,493 16,501,245 + 1 183,066,795 195,763,487 12,696,693 - 13 98,507,462 111,341,765 12,834,304 -

Rat chromosome 14, length 112220682
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
83 4 483,120 1,099,132 616,013 + 5 105,507,823 105,974,537 466,715 + 14 1,487,418 1,980,786 493,369 -
7 1 89,320,430 93,175,140 3,854,711 + 5 102,559,569 105,473,748 2,914,180 + 14 2,008,711 5,499,620 3,490,910 -
86 4 10,146,763 89,382,043 79,235,281 + 5 37,285,094 101,594,831 64,309,738 + 14 6,355,607 77,358,748 71,003,142 -
85 4 4,200,518 8,859,586 4,659,069 + 5 33,728,651 36,651,411 2,922,761 - 14 77,795,153 80,931,046 3,135,894 +
84 4 1,525,212 3,792,758 2,267,547 + 5 31,787,970 33,542,816 1,754,847 + 14 81,121,121 82,902,654 1,781,534 -
372 22 30,352,686 30,808,636 455,951 + 5 30,994,898 31,397,145 402,248 + 14 83,321,318 83,740,938 419,621 -
371 22 27,493,144 30,277,607 2,784,464 + 11 3,045,655 5,419,562 2,373,908 - 14 83,788,781 86,190,282 2,401,502 -
156 7 43,633,783 52,886,651 9,252,869 + 11 5,603,595 14,743,872 9,140,278 + 14 86,396,166 95,560,023 9,163,858 +
157 7 52,969,325 53,632,509 663,185 + 11 14,834,428 15,578,468 744,041 - 14 95,672,563 96,364,522 691,960 -
158 7 53,666,521 55,012,415 1,345,895 + 11 15,620,769 17,019,585 1,398,817 + 14 96,400,335 97,829,918 1,429,584 +
31 2 53,899,193 68,650,050 14,750,858 + 11 17,035,064 31,226,099 14,191,036 - 14 97,844,733 112,187,533 14,342,801 -

Rat chromosome 15, length 109774626
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
231 10 74,765,842 79,567,961 4,802,120 + 14 15,266,933 19,216,341 3,949,409 + 15 83,554 4,263,562 4,180,009 -
54 3 22,999,942 27,550,695 4,550,754 + 14 9,829,253 14,339,560 4,510,308 - 15 8,403,218 12,329,152 3,925,935 +
63 3 57,800,573 63,864,162 6,063,590 + 14 3,094,324 9,435,424 6,341,101 + 15 12,650,439 19,089,527 6,439,089 -
273 14 50,889,077 56,604,691 5,715,615 + 14 36,462,978 41,044,578 4,581,601 + 15 21,025,091 25,696,293 4,671,203 +
271 14 18,720,999 22,936,584 4,215,586 + 14 42,144,047 46,586,117 4,442,071 + 15 26,759,412 34,091,071 7,331,660 +
262 13 19,451,963 22,249,828 2,797,866 + 14 47,525,687 49,753,203 2,227,517 + 15 35,892,092 38,160,004 2,267,913 +
263 13 22,591,477 25,566,991 2,975,515 + 14 50,256,619 51,934,000 1,677,382 - 15 38,740,095 40,458,831 1,718,737 -
267 13 49,160,778 51,291,453 2,130,676 + 14 51,965,532 53,604,108 1,638,577 + 15 40,489,121 42,249,880 1,760,760 +
181 8 9,579,292 11,711,299 2,132,008 + 14 53,671,757 55,268,740 1,596,984 - 15 42,327,678 43,989,411 1,661,734 -
184 8 20,035,898 28,970,491 8,934,594 + 14 55,279,001 62,839,817 7,560,817 - 15 44,001,666 52,965,081 8,963,416 -
266 13 40,981,392 48,715,417 7,734,026 + 14 63,003,465 69,753,585 6,750,121 - 15 53,148,700 60,467,867 7,319,168 -
269 13 52,180,562 101,898,253 49,717,692 + 14 70,081,431 115,745,414 45,663,984 + 15 60,884,159 109,736,960 48,852,802 +

Rat chromosome 16, length 90224819
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
232 10 79,643,219 81,143,182 1,499,964 + 14 19,441,986 20,794,298 1,352,313 + 16 15,884 1,399,687 1,383,804 +
62 3 52,212,642 57,767,106 5,554,465 + 14 21,127,642 26,046,337 4,918,696 - 16 1,708,065 6,750,520 5,042,456 -
52 3 15,239,717 16,285,627 1,045,911 + 14 26,063,083 26,805,429 742,347 + 16 6,784,150 7,536,640 752,491 +
225 10 48,317,763 50,944,121 2,626,359 + 14 26,999,594 28,693,627 1,694,034 - 16 7,771,022 9,586,997 1,815,976 -
233 10 81,820,546 88,990,118 7,169,573 + 14 29,041,918 35,917,083 6,875,166 - 16 9,962,923 17,611,086 7,648,164 -
346 19 16,027,834 16,747,568 719,735 + 8 71,211,701 71,767,717 556,017 + 16 17,670,140 18,126,863 456,724 -
347 19 17,035,421 17,800,438 765,018 + 8 70,322,350 70,771,910 449,561 + 16 18,437,019 18,920,837 483,819 +
348 19 17,675,414 19,619,771 1,944,358 + 8 68,813,131 69,939,902 1,126,772 - 16 19,022,643 20,116,867 1,094,225 +
183 8 18,126,363 19,978,034 1,851,672 + 8 66,569,429 68,203,424 1,633,996 + 16 22,237,236 23,749,019 1,511,784 -
93 4 163,977,702 189,845,453 25,867,752 + 8 41,961,455 66,363,704 24,402,250 - 16 23,969,512 52,638,044 28,668,533 +
94 4 189,885,350 190,209,182 323,833 + 8 41,589,899 41,918,061 328,163 - 16 52,664,787 52,959,427 294,641 -
95 4 190,289,343 191,375,700 1,086,358 + 8 40,510,604 41,541,277 1,030,674 - 16 53,049,707 54,185,955 1,136,249 +
182 8 12,355,545 17,763,927 5,408,383 + 8 35,133,433 40,409,168 5,275,736 + 16 54,274,136 59,704,367 5,430,232 -
180 8 7,981,988 9,510,886 1,528,899 + 8 33,716,478 35,112,164 1,395,687 - 16 59,730,293 61,100,500 1,370,208 +
185 8 29,011,077 36,483,567 7,472,491 + 8 26,426,100 33,712,012 7,285,913 - 16 61,106,362 68,637,314 7,530,953 +
186 8 36,581,784 37,653,367 1,071,584 + 8 24,939,927 25,955,683 1,015,757 + 16 69,182,804 70,234,453 1,051,650 -
188 8 42,433,969 42,795,723 361,755 + 8 24,688,234 24,906,492 218,259 - 16 70,268,601 70,512,015 243,415 +
187 8 37,718,833 42,223,832 4,505,000 + 8 21,194,047 24,571,570 3,377,524 - 16 70,628,876 74,196,648 3,567,773 +
268 13 51,372,956 51,953,227 580,272 + 8 20,709,506 20,993,130 283,625 + 16 74,428,636 74,699,063 270,428 -
179 8 571,877 6,763,331 6,191,455 + 8 13,983,750 19,503,052 5,519,303 + 16 75,749,706 80,506,733 4,757,028 -
270 13 102,400,031 114,052,501 11,652,471 + 8 4,843,406 13,819,045 8,975,640 + 16 80,630,764 90,209,460 9,578,697 -

Rat chromosome 17, length 97307196
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
97 5 1,799,944 7,932,909 6,132,966 + 13 64,773,898 69,580,216 4,806,319 - 17 25,413 5,117,327 5,091,915 +
206 9 90,665,223 93,261,925 2,596,703 + 13 61,151,274 62,666,423 1,515,150 + 17 6,284,647 7,817,399 1,532,753 -
203 9 79,798,087 83,838,619 4,040,533 + 13 57,306,177 59,908,060 2,601,884 + 17 9,650,038 12,431,207 2,781,170 -
116 5 134,110,536 137,121,370 3,010,835 + 13 54,753,961 57,275,131 2,521,171 + 17 12,450,088 15,039,374 2,589,287 -
124 5 174,313,895 176,838,415 2,524,521 + 13 52,847,558 54,617,290 1,769,733 + 17 15,190,982 16,927,859 1,736,878 -
123 5 173,698,426 174,108,907 410,482 + 13 52,517,696 52,821,131 303,436 - 17 16,952,709 17,261,112 308,404 +
204 9 84,333,496 88,142,780 3,809,285 + 13 50,018,251 52,431,532 2,413,282 + 17 17,584,657 20,124,701 2,540,045 -
205 9 88,326,888 90,365,402 2,038,515 + 13 48,023,497 49,246,326 1,222,830 - 17 20,921,471 22,178,850 1,257,380 +
126 6 171,329 20,091,196 19,919,868 + 13 30,005,519 47,975,573 17,970,055 + 17 22,348,024 40,395,386 18,047,363 -
127 6 20,128,213 29,062,976 8,934,764 + 13 20,581,436 29,723,675 9,142,240 - 17 40,764,556 51,251,891 10,487,336 +
155 7 36,231,162 43,312,412 7,081,251 + 13 13,647,190 20,476,960 6,829,771 - 17 51,435,503 59,283,797 7,848,295 +
18 1 231,635,074 231,964,196 329,123 + 13 13,372,764 13,615,029 242,266 - 17 59,347,752 59,586,710 238,959 +
221 10 31,140,226 32,605,919 1,465,694 + 18 5,077,651 6,289,850 1,212,200 + 17 59,656,466 60,926,401 1,269,936 -
220 10 29,906,905 30,527,774 620,870 + 18 4,591,516 5,087,541 496,026 - 17 60,914,577 61,426,454 511,878 +
219 10 29,101,174 29,809,726 708,553 + 18 3,465,377 4,198,625 733,249 + 17 62,031,439 62,682,636 651,198 -
218 10 27,821,445 28,911,123 1,089,679 + 18 6,689,575 7,767,388 1,077,814 + 17 63,457,831 64,451,021 993,191 +
223 10 35,777,208 37,242,075 1,464,868 + 18 7,968,232 9,440,321 1,472,090 - 17 64,666,235 66,177,993 1,511,759 -
19 1 232,092,913 236,358,242 4,265,330 + 13 9,879,048 13,212,970 3,333,923 - 17 66,564,886 71,222,372 4,657,487 +
215 10 148,840 5,951,198 5,802,359 + 13 3,339,657 9,779,968 6,440,312 - 17 71,290,139 77,849,724 6,559,586 +
216 10 6,070,263 15,603,442 9,533,180 + 2 3,038,848 11,779,756 8,740,909 - 17 77,943,505 86,309,459 8,365,955 +
217 10 15,629,198 27,676,319 12,047,122 + 2 11,999,292 23,443,094 11,443,803 + 17 86,342,301 96,799,116 10,456,816 +

Rat chromosome 18, length 87338544
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
324 18 169,391 567,930 398,540 + 18 9,611,845 10,009,349 397,505 - 18 917,776 1,317,876 400,101 -
330 18 18,431,618 40,860,672 22,429,055 + 18 10,068,026 31,793,697 21,725,672 + 18 1,399,656 23,921,740 22,522,085 +
42 2 127,318,429 128,680,440 1,362,012 + 18 31,927,242 32,840,677 913,436 - 18 24,090,509 25,033,767 943,259 -
111 5 110,330,256 112,300,511 1,970,256 + 18 32,989,872 34,648,856 1,658,985 + 18 25,203,283 26,882,653 1,679,371 +
117 5 137,256,961 147,601,401 10,344,441 + 18 34,675,593 44,363,337 9,687,745 + 18 26,903,401 37,782,702 10,879,302 +
112 5 112,343,444 119,195,956 6,852,513 + 18 44,683,573 50,813,910 6,130,338 + 18 38,087,713 45,661,228 7,573,516 +
113 5 119,237,317 119,681,165 443,849 + 18 50,883,088 51,363,121 480,034 - 18 45,760,134 46,255,712 495,579 -
114 5 119,754,901 130,393,506 10,638,606 + 18 51,387,441 60,551,392 9,163,952 + 18 46,278,042 56,157,207 9,879,166 +
118 5 147,631,363 150,153,185 2,521,823 + 18 60,852,180 62,986,917 2,134,738 - 18 56,505,479 58,810,679 2,305,201 -
327 18 10,192,723 11,496,201 1,303,479 + 18 63,074,794 64,004,520 929,727 + 18 58,890,181 59,863,972 973,792 +
332 18 54,053,773 56,683,813 2,630,041 + 18 64,042,903 66,303,701 2,260,799 + 18 59,895,154 62,250,353 2,355,200 +
333 18 56,728,023 57,127,326 399,304 + 18 66,362,656 66,691,216 328,561 + 18 62,302,464 62,638,648 336,185 -
334 18 57,142,503 58,048,268 905,766 + 18 66,705,648 67,435,578 729,931 + 18 62,797,334 63,612,517 815,184 +
328 18 11,658,515 13,126,559 1,468,045 + 18 67,483,417 68,318,760 835,344 + 18 63,655,964 64,538,726 882,763 +
329 18 13,274,481 13,912,007 637,527 + 18 68,432,117 68,862,915 430,799 + 18 64,635,287 65,084,493 449,207 -
331 18 41,245,003 53,943,062 12,698,060 + 18 68,980,183 80,324,508 11,344,326 - 18 65,149,434 76,964,438 11,815,005 -
338 18 76,469,853 77,740,271 1,270,419 + 18 80,402,094 81,350,235 948,142 - 18 77,015,487 77,948,614 933,128 -
337 18 75,626,508 75,933,747 307,240 + 18 81,727,407 81,964,468 237,062 - 18 78,082,269 78,335,381 253,113 +
336 18 66,547,252 75,370,838 8,823,587 + 18 82,171,132 90,596,289 8,425,158 - 18 78,388,638 87,142,842 8,754,205 -

Rat chromosome 19, length 59223525
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
301 16 55,614,735 66,697,914 11,083,180 + 8 92,864,168 104,147,795 11,283,628 + 19 268,437 11,943,585 11,675,149 -
374 22 32,001,609 34,198,061 2,196,453 + 8 71,894,960 74,328,814 2,433,855 + 19 12,056,454 14,091,525 2,035,072 +
369 22 24,751,034 25,282,575 531,542 + 5 109,412,448 109,808,145 395,698 - 19 14,280,505 14,672,758 392,254 -
300 16 46,435,928 55,478,033 9,042,106 + 8 84,552,874 92,370,126 7,817,253 + 19 15,102,789 23,164,875 8,062,087 -
344 19 12,602,657 14,514,587 1,911,931 + 8 82,852,337 84,386,422 1,534,086 - 19 24,716,298 26,258,326 1,542,029 +
91 4 141,729,720 151,161,098 9,431,379 + 8 74,629,255 82,733,961 8,104,707 - 19 26,355,591 34,354,680 7,999,090 +
302 16 66,758,097 69,711,086 2,952,990 + 8 104,601,822 107,024,313 2,422,492 + 19 34,953,437 37,434,734 2,481,298 +
303 16 69,925,799 73,690,861 3,765,063 + 8 107,381,555 110,659,418 3,277,864 - 19 37,595,579 41,063,714 3,468,136 -
304 16 74,229,322 89,810,196 15,580,875 + 8 110,684,180 123,227,800 12,543,621 + 19 41,090,757 53,862,513 12,771,757 +
17 1 225,344,647 230,732,715 5,388,069 + 8 123,324,555 125,925,283 2,600,729 + 19 53,909,835 56,546,928 2,637,094 +
222 10 33,361,413 35,324,009 1,962,597 + 8 126,645,193 128,371,181 1,725,989 - 19 56,968,301 58,794,909 1,826,609 -

Rat chromosome 20, length 55296979
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
128 6 30,574,738 33,298,628 2,723,891 + 17 32,504,226 34,609,513 2,105,288 - 20 2,932,295 5,131,591 2,199,297 +
129 6 33,387,532 39,057,666 5,670,135 + 17 25,634,769 29,653,058 4,018,290 + 20 5,175,793 9,265,214 4,089,422 +
362 21 42,385,548 43,961,178 1,575,631 + 17 29,668,636 30,764,596 1,095,961 + 20 9,282,781 10,470,973 1,188,193 +
363 21 44,077,028 46,940,174 2,863,147 + 10 76,005,051 78,214,925 2,209,875 - 20 10,604,594 12,824,924 2,220,331 +
228 10 55,222,480 68,032,282 12,809,803 + 10 64,225,049 74,618,825 10,393,777 - 20 14,313,503 25,055,605 10,742,103 +
229 10 68,153,212 70,253,897 2,100,686 + 10 62,532,944 64,143,820 1,610,877 - 20 25,198,173 26,970,456 1,772,284 -
230 10 70,373,329 74,077,273 3,703,945 + 10 59,462,520 62,461,331 2,998,812 - 20 27,155,061 30,053,497 2,898,437 -
137 6 117,056,114 123,081,804 6,025,691 + 10 51,523,123 57,805,391 6,282,269 + 20 30,213,579 36,867,533 6,653,955 +
38 2 108,689,995 109,217,110 527,116 + 10 57,898,031 58,319,703 421,673 + 20 37,093,866 37,523,460 429,595 -
136 6 100,632,494 116,674,803 16,042,310 + 10 33,966,286 51,212,456 17,246,171 - 20 38,615,960 55,288,911 16,672,952 -

Rat chromosome X, length 160775580
  Human Mouse Rat
ID chr start end len sign chr start end len sign chr start end len sign
388 X 113,983,769 123,820,821 9,837,053 + X 20,070,775 31,236,234 11,165,460 + X 7,420 11,636,571 11,629,152 -
379 X 36,214,931 46,056,474 9,841,544 + X 6,871,662 18,582,352 11,710,691 + X 12,794,796 25,919,627 13,124,832 -
380 X 47,147,582 48,894,422 1,746,841 + X 3,001,442 4,444,364 1,442,923 - X 26,301,840 27,841,997 1,540,158 +
381 X 48,952,800 50,065,892 1,113,093 + X 5,532,812 6,388,034 855,223 - X 28,623,390 29,480,690 857,301 -
387 X 105,444,522 112,094,259 6,649,738 + X 122,955,089 128,920,118 5,965,030 + X 31,106,581 37,529,944 6,423,364 -
383 X 54,082,290 54,921,923 839,634 + X 132,857,488 133,285,781 428,294 + X 38,148,329 38,664,806 516,478 -
382 X 51,762,762 53,447,516 1,684,755 + X 130,695,549 132,215,832 1,520,284 - X 40,110,053 41,881,176 1,771,124 -
377 X 9,810,046 23,022,644 13,212,599 + X 134,954,594 149,981,448 15,026,855 - X 44,845,158 61,699,872 16,854,715 +
376 X 8,234,095 8,961,984 727,890 + X 61,307,813 62,122,508 814,696 + X 62,648,925 63,422,637 773,713 +
378 X 23,053,152 35,635,295 12,582,144 + X 63,715,742 79,232,200 15,516,459 - X 65,023,306 81,967,380 16,944,075 -
384 X 60,800,185 81,290,506 20,490,322 + X 79,805,569 96,416,820 16,611,252 + X 82,635,071 99,842,425 17,207,355 +
385 X 81,349,039 91,417,469 10,068,431 + X 96,519,755 108,471,700 11,951,946 - X 99,866,117 112,836,721 12,970,605 +
386 X 92,456,419 105,353,338 12,896,920 + X 109,600,014 122,777,438 13,177,425 + X 114,406,965 128,855,112 14,448,148 +
389 X 124,043,077 138,003,617 13,960,541 + X 31,501,165 45,513,870 14,012,706 + X 131,187,437 147,109,361 15,921,925 +
390 X 138,161,195 138,493,164 331,970 + X 45,555,251 45,974,397 419,147 - X 147,139,406 147,425,024 285,619 -
391 X 139,261,979 150,991,936 11,729,958 + X 46,772,273 58,253,966 11,481,694 + X 148,306,181 160,166,354 11,860,174 +

This Article

  1. doi: 10.1101/gr.1975204 Genome Res. April 2004 vol. 14 no. 4 507-516
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