Tracking the Evolution of the SARS Coronavirus Using High-Throughput, High-Density Resequencing Arrays
Suppl Table 1: PCR Primer Sequences
| Primer Name | Primer Sequence | Strand | Position |
| N15329-F | TACCCAGGAAAAGCCAACCAACCTCGATCT | SARS-F | 1 |
| N1-F | CATTCAGTACGGTCGTAGCGGTATAACACT | SARS-F | 530 |
| N9-F | GTCACTATCGCTGGCGCAAAGTTGCGATCA | SARS-F | 2325 |
| N155-F | CTTTACCGTCAGTGTATACGTGGCAAGGAG | SARS-F | 2394 |
| N164-F | AGGACAGCGTACAGAGTTAGGTGTTGAATT | SARS-F | 4727 |
| N438-F | GATGACACACTACGTAGTGAAGCTTTCGAG | SARS-F | 5049 |
| N18-F | AGGTGACGATTTCATCGTACAAGCTAGACT | SARS-F | 7102 |
| N3872-F | TTTATCATTAGTATTGTACAAATGGCACCC | SARS-F | 7278 |
| N190-F | GCTTCGTCCAGACACTCGTTATGTGCTTAT | SARS-F | 9020 |
| N844-F | ACCTAAAATTGCGTAGCGAGACACTGTTGC | SARS-F | 9748 |
| N23-F | TATGAATGGTCGTACTATCCTTGGTAGCAC | SARS-F | 10793 |
| N2547-F | TGCTAGCTGGGTGATGCGTATCATGACATG | SARS-F | 11147 |
| N198-F | GGAAATGCTCGATAACCGTGCTACTCTTCA | SARS-F | 11975 |
| N199-F | TTTTAAACGGGTTTGCGGTGTAAGTGCAGC | SARS-F | 13375 |
| N37-F | ATTTTCGTGAGTTAGGAGTCGTACATAATC | SARS-F | 14394 |
| N472-F | TAAACTTACATAGCTCGCGTCTCAGTTTCA | SARS-F | 14430 |
| N212-F | CTTCACTTCGTTGCGGTGCCTGTATTAGGA | SARS-F | 16185 |
| N493-F | CAACATGTGATTGGACTAATGCTGGCGATT | SARS-F | 16479 |
| N49-F | ATGTAGTGCGTATTAAGATAGTACAAATGC | SARS-F | 18432 |
| N508-F | ATTGGTCTGTTGAATACCCTATTATAGGAG | SARS-F | 18825 |
| N225-F | TTCATACAGCGATATAAGCTCGAGGGCTAT | SARS-F | 20195 |
| N1462-F | CCAGGTGTTGCGATGCCTAACTTGTACAAG | SARS-F | 20591 |
| N519-F | AATTGGGGCTAACTATCTTGGCAAGCCGAA | SARS-F | 21190 |
| N3352-F | GGCTATACCATGCATGCTAACTACATTTTC | SARS-F | 21233 |
| N522-F | TTCTATGGCTAAAACCTCCGTAGATTGTAA | SARS-F | 23608 |
| N4783-F | TTGCACACAACTAAATCGTGCACTCTCAGG | SARS-F | 23698 |
| N230-F | ATATCCTTTCGCGACTTGATAAAGTCGAGG | SARS-F | 24357 |
| N530-F | GAAGGCAAAGCATACTTCCCTCGTGAAGGT | SARS-F | 24671 |
| N66-F | GACAACGGTACTATTACCGTTGAGGAGCTT | SARS-F | 26388 |
| N960-F | GTGACTGGCGGGATTGCGATTGCAATGGCT | SARS-F | 26604 |
| N960-F | GTGACTGGCGGGATTGCGATTGCAATGGCT | SARS-F | 26604 |
| N265-R | CATGGCGTCGACAAGACGTAATGACTGTTC | SARS-R | 1971 |
| N622-R | GAAGCTATCAACGGGCGTCTCGAGTGCTTC | SARS-R | 2538 |
| N86-R | AAACTCAGTAACTTCGGTACCGGATTCAAC | SARS-R | 2835 |
| N627-R | TACACACCACATTAAGAACTCGCTTTGCAG | SARS-R | 5407 |
| N278-R | AACTCCATCGAGTTTATACGACACAGGCTT | SARS-R | 5811 |
| N3514-R | ATAGCACATCATGCAAGTCGAAGAGGTGCA | SARS-R | 7389 |
| N299-R | GTTGTACACTCAACGCGTGTGGCACGATTG | SARS-R | 7424 |
| N1076-R | AACCTTTAATGGTATGATTAGGTCTCATGG | SARS-R | 10354 |
| N669-R | CATATCTAAGACGGCAATTCCTGTTTGAGC | SARS-R | 10731 |
| N1082-R | AGCATCATCATAAACAGTGCGAGCTGTCAT | SARS-R | 11262 |
| N300-R | AAACATGATAGTCGTAACGACACCAGAATA | SARS-R | 11409 |
| N98-R | TGGTAGTTAGACATAGTATGCCTCTTAACT | SARS-R | 13567 |
| N105-R | ACCTAAGTTAGCATATACGCGTAAGATGTC | SARS-R | 13862 |
| N1664-R | AAGCATGTAGTGCGTTTATCTAGCAATAAA | SARS-R | 14512 |
| N108-R | GACATTACGCTTAGTATACGCGAAAAGTGC | SARS-R | 14930 |
| N1161-R | AGAGAGTACTTCGCGTACAGTGGCAATACC | SARS-R | 16598 |
| N109-R | GAGCATGCCGTATACACTATGCGAGCAGAT | SARS-R | 17050 |
| N709-R | GTGAATTTATCGTGATGTATAGCATAAGAA | SARS-R | 19057 |
| N115-R | TGGCTGGGTAACGATCAACGTTACAATTCC | SARS-R | 19107 |
| N1215-R | ACAGTTGAGTATACTTTGCGACATTCATCA | SARS-R | 20694 |
| N116-R | GTCCTAGGGTCATACATATCGCTAATAATA | SARS-R | 20950 |
| N1217-R | ATCAAAAGTGGTGCACCGGTCAAGGTCACT | SARS-R | 21515 |
| N348-R | ACACAATTCAAAGTTACATGCTCGTATAAC | SARS-R | 21845 |
| N3043-R | TGACTTGAGCGAACACTTCACGTGTGTTGC | SARS-R | 23748 |
| N15707-R | TTAATATCACCTAGGCATTCGCCATATTGC | SARS-R | 23926 |
| N349-R | GGCTTGTAGCGGTATCGTTGCTGTAGCATG | SARS-R | 25339 |
| N117-R | GGCACGCTAGTAGTCGTCGTCGGCTCATCA | SARS-R | 26040 |
| N768-R | GGAGTGTCCGGCCATTCGCAAGTGACCACG | SARS-R | 26814 |
| N371-R | GTCGTTGCTACCGGCGTGGTCTGTATTTAA | SARS-R | 26994 |
| N5958-R | ATTTTACACATTAGGGCTCTTCCATATAGG | SARS-R | 29628 |
| N10995-R | AGCTATTAAAATCACATGGGGATAGCACTA | SARS-R | 29667 |
Last updated 9.10.2003
This Article
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doi: 10.1101/gr.2141004 Genome Res. March 2004 vol. 14 no. 3 398-405
