Genetic Variation Among World Populations: Inferences From 100 Alu Insertion Polymorphisms

Locus

Primer A

Primer B

Tm

Chr

Alleles

Accession

ACE

CTGGAGACCACTCCCATCCTTTCT

GATGTGGCCATCACATTCGTCAGAT

58

17

500, 190

X62855

APO

AAGTGCTGTAGGCCATTTAGATTAG

AGTCTTCGATGACAGCGTATACAGA

58

11

410, 100

X53550

B65

ATATCCTAAAAGGGACACCA

AAAATTTATGGCATGCGTAT

52

8

439, 99

U18396

COL3A1

ACCTGCAGCACCAGGAGGTCCTGGAGGGCC

GAGTCCTTTAGAAGGATATGCTCTG

64

2

700, 380

AC066694

HS2.43

ACTCCCCACCAGGTAATGGT

AGGGCCTTCATCCAGTTTGT

58

1

485, 185

U57005

HS4.32

GTTTATTGGGCTAACCTGGG

TGACCAGCTAACTTCTACTTTAACC

58

12

600, 290

U57006

HS4.65

TGAAGCCAATGGAAAGAGAG

ACAGGAGCATCTAAACCTTGG

58

9

650, 350

U57007

HS4.75

CAGCATTACATACAATAGTTAGGAGC

GTGATATTTGTCTTTCTGTACCTGG

60

3

670, 370

U57009

PV92

AACTGGGAAAATTTGAAGAAAAGT

TGAGTTCTCAACTCCTGTGTGTTAG

58

16

450, 130

AC009028

Sb22777/Sb19.12

TTAACATCCCTGCAACCCATC

GATTATAGTCACCCTGTTGTGC

54

19

470, 170

AF015169

Sb23467/Sb19.3

TCTAGGCCCAGATTTATGGTAACTG

AAGCACAATTGGTTATTTTCTGAC

58

19

425, 114

AF015160

TPA25

GTAAGAGTTCCGTAACAGGACAGCT

CCCCACCCTAGGAGAACTTCTCTTT

58

8

457, 134

K03021

Ya5NBC102

TCCCATTTCTCTAGACCTGCTG

CCCATAACAGGTCTTCATATTTCC

55

17

483, 194

AF118569

Ya5NBC120

GGACCACATGACTGAGTGTAAAGT

GAGGTGGCCTCTTAACCATAATTC

55

17

518, 199

AC005863

Ya5NBC123

ATCAAGTTGACACTCAGTATTCACCAC

CTAGTCTGCAGAACTGTGAGAAATGTA

55

5

490, 180

AC005739

Ya5NBC132

CTCGTGATTCACAGAAGTGTTGTAAG

CGGGGTTCATCCTTAATACATACAT

60

6

458, 228

U91328

Ya5NBC135

ATTAAGCTCATGGTAACCAGCAC

GACTCTCCTCTCTGGATTAGAAACAG

60

11

436, 117

U01102

Ya5NBC147

TAGCTGGGGGAGGTAGATAATAAAC

AAATATCACCTTATCAGTGGGACCT

60

12

493, 155

AC007656

Ya5NBC148

ACAAGATGACAGATGTAAACCCAAC

AAGGTGTTGTCAGACTAATCTATCG

60

20

505, 193

AL031659

Ya5NBC150

AAATGGAGACACAGAGGTGTAAAGA

CCCAAACTGCATATTTAAAGGGTAG

60

19

491, 169

AF135028

Ya5NBC157

CATACGTTAAATCACTCGGTACTCA

TCAGAAAAGTATACAGGTGATGTGC

60

17

516, 207

AC005281

Ya5NBC159

GAGGGTCTTTCCTAGGTTTTGTTT

ATGTCAGGTGTCCCTTATGGAGTAT

60

1

590, 178

AL031274

Ya5NBC171

TCTAGAATTACAAGTGCAAGCCATC

CTTCTCATCCCTGCTAACATAACAT

55

6

451, 130

AL035688

Ya5NBC182

GAAGGACTATGTAGTTGCAGAAGC

AACCCAGTGGAAACAGAAGATG

60

7

563, 287

AC006365

Ya5NBC208

AATACCTTGTACATCTTCACCCCTA

TCTCTCTGCTGCACAGTTTGTT

50

14

439, 110

AL132992

Ya5NBC212

CATTTGGCGCAAGTGGTATT

ATCCCAAAGAAACCCACGA

60

7

502, 190

AC002074

Ya5NBC216

GATGTGACCCTGGCTTGTAAA

CAGAGTCCCTGTGCAAAATG

55

7

456, 141

AC007245

Ya5NBC221

CAGTTTTCCATATACATGTGGGTTC

TAGTGTTAAGAGGCCCATTTTCTAC

60

22

640, 313

AC004019

Ya5NBC237

CCCATGGAGGGTCTTTCCTA

CTGGAAACCATCCTTCACAGT

60

1

410, 88

AL031274

Ya5NBC239

CAGCTGAGAACTGTCACAAATAGAA

ATCAATGACTGACTTGTGCTGAGT

60

9

531, 198

AL133284

Ya5NBC241

GGTTCCAATAGAGAGCAACAGAA

ACCTTAAGCTTTCCCCCAGA

55

15

392, 66

AC084758

Ya5NBC242

AACAAAATTCCCTTTCCTCCA

GGCAATCTGACCTTGGGTAA

50

7

503, 193

AC009517

Ya5NBC27

CTGAATACAGGTATCACTGAACAGAAC

ACAGTGTAAAGTCTAACCTACCAGAGGAT

55

11

591, 265

AC003691

Ya5NBC311

TCTTGGCAAGGAGATGTGAA

AATCACATCCGAGGGTGTCT

60

5

584, 279

AC008843

Ya5NBC327

AGGCAGGTTCAATGTTCAAA

TTGTCTTATTGTGCTGGCTAGA

60

6

668, 339

AL132799

Ya5NBC333

GGCATGCTATCATTCCCAAA

CCAAACTTCTGTTTGAGAGAATACG

60

14

588, 281

AL117356

Ya5NBC335

TGGGTACTTTGGCCTTAGAGAA

TTCACAGCATTAGAGAGAGTTGATG

58

5

500, 190

AC025767

Ya5NBC345

GCCATGAGAGTGGTCAGCAT

AGTCTCCACCATCTCTGCTGT

60

3

391, 94

AC008249

Ya5NBC347

CATGCCCATTGCTTTACGTT

TGGGGTAGATGGACTCATCC

60

1

465, 140

AL035411

Ya5NBC351

TTCCTCCCCTTTTTCCTGTT

TGTCAGTATGTAAACCCATGCT

55

21

437, 123

AP000459

Ya5NBC354

GTAGCTTGGCCTGTGCTCTT

CCTCTGGGCTGAGAAACTCTT

65

7

466, 148

AC008039

Ya5NBC45

TAGGGTAAGGAATATGTGCTGCTTTAG

GTCTCTGAACGACTATGTGAGCAG

60

20

591, 265

AL049868

Ya5NBC51

ATATTCCAGAAGTTTCCTTACATCTAGTGC

AAAGCTTTAAGTCTCCACCATCTCT

60

3

437, 140

AC008249

Ya5NBC54

GTTTATGTCAGTAGGAGTTTTCTCGTGTAG

TCATTGTATCATCTGCTGTACCTGT

60

6

433, 130

AL024507

Ya5NBC61

TGAAATAATCCAGTTGGGGAAG

GTATATCTCTACCGAGACTCAGTTTTTAGC

55

4

493, 180

AC009594

Ya5NBC96

TAGATGAGATAGAGCCATCAAACACTC

GTATTGTAACCCATAGAGCAACCAT

60

7

509, 169

AC004547

Yb8NBC106

TCACAACTGTAAAGATATGGAATCC

CTGGGTTGCATTTCATGGTA

60

21

558, 233

AF064865

Yb8NBC120

CAGTGGATCTCCATTTTACCTCTC

GGAAAGGTTTCAGGAAGAAAGTG

60

22

532, 212

AC004019

Yb8NBC125

AGCCAGAAACCCTGAACAAG

AAAGGCCCCAGAAGTATACCA

60

22

415, 97

Dj309I22

Yb8NBC13

TCTGGGTTTCTCTGGTGGAC

CTGGCAAATGCTACCCAAGT

60

16

510, 168

AC002331

Yb8NBC146

CTCTTCTCTCCAGGAAACGTC

GGAGCTCTGCCTTACACTCAA

60

16

887, 592

AC009028

Yb8NBC148

CCAGGCCTCCATCTTTGATA

TCACTTTTGGGCATGTCAAG

60

14

537, 218

AC010582

Yb8NBC157

TATGGTTCTCAGCCATCACG

ATTCTTCCCCAAAGGGAGTC

60

10

712, 423

AL121748

Yb8NBC181

CATGTACCTTAGAATTCCACTCTCA

CCCCAAAGTTTATAGTCTGTTGTCT

55

3

487, 151

AC007917

Yb8NBC192

CTGCTCTACCCTAGGCTCTTCTATC

GCTCCTCTGCTTTTATGTGTTCTAC

55

7

423, 132

AC006325

Yb8NBC201

GGAGAAAATGTAAGGTTTCTAGCAC

ACCAATGCAACTATCTACACTGACA

60

7

476, 145

AC007558

Yb8NBC207

GTAATATGAGGTGATGGGGGTTACT

GGTGAAAGAAGAACCCCTAAGTTAT

60

7

471, 154

ACOO5OO8

Yb8NBC227

AAGAAAAGGGAAGCCTGGAG

CAGTCATCACCAGCCATGAG

60

17

881, 546

AC005799

Yb8NBC237

GCCAAAATCAACTGCCAAAC

TGCTGAGGATAGAGCTATAGCAGA

60

7

491, 164

AC004613

Yb8NBC243

GAACCCCATCCATTCTCTTACA

GTGGCAAAATATTGGCGACT

60

16

508, 156

AC003003

Yb8NBC405

GCCCATCCCCTATTATAGCC

ACCAAACCCCCATGACACTA

60

3

463, 155

AC024057

Yb8NBC412

CAAAGATGGTTGTTGAGGTTGA

CCCAGCAACTTCCCCTTAAT

60

7

500, 185

AC018634

Yb8NBC419

CATCTCCTGGCAACACTGAG

ACAAAGCAAGGGTATTTACAGC

60

5

572, 241

AC025472

Yb8NBC420

AAATGCCCAAGTTTCATTGC

AACTGCCACAGCGATTCTTT

60

2

430, 103

AC008177

Yb8NBC435

TGAATGATTGGGACTGGGTA

TGGCTGGATGAACTTTCACA

55

20

444, 113

AL138808

Yb8NBC437

GGCGGTGATGGTAAAACAAC

CTTCCCCAAGGAGCCTTTTA

60

13

498, 183

AL390755

Yb8NBC441

CTCCTGGCATGTCTTCAGGT

TCTCAGCCTAGACCAATACCAA

60

6

488, 160

AL137009

Yb8NBC450

TGAAATCTATCTCGTAGGAAGGCTA

CCGCTGGTTACCAAAAGATT

61

13

500, 186

AL353738

Yb8NBC461

CCAAAGTCATTCTTCATTCTGC

GACACCCGAAAAGACTAAAGACA

58

1

529, 205

AL109944

Yb8NBC463

GCCAGTGCTTGGGTTTTAGA

CTGGCAATGAATTTCCCTTT

56

13

543, 220

AL138914

Yb8NBC466

TTGAGGCACTAGACTTACAGAATTG

CAGGAGCTGCTTTCACCTCT

60

14

427, 92

AL358337

Yb8NBC479

CATCCTGTTTCAACATCAGCA

GTTCCCAGCAGGAATCTGAG

60

20

398, 182

AL121919

Yb8NBC480

CCTCTCTCACAAACAGTGCAG

TCGCAAGACACAGGCTATCA

65

13

457, 114

AL355980

Yb8NBC485

TGTTCTTGCCAGAAAGTTTGC

CCAATCCAGGACTCGACATT

58

1

433, 95

AL133286

Yb8NBC49

GCAGTGGATTGGTTTTTCTG

GCTGAAAGAGGCATTGAAATC

60

6

542, 205

AL031904

Yb8NBC5

AAGGTCTAAGCGCAGTGGAA

TGTATGCAGGTTGCTTGCTC

60

7

503, 167

AC004027

Yb8NBC505

TGAGCCTATGACTGAGCATGA

GGGGCTCTCATCAGCATTTA

60

5

764, 427

AC026722

Yb8NBC516

GGGCTCAGGGATACTATGCTC

GCCTAGGCCTACCACTCAGA

60

20

445, 124

AL391316

Yb8NBC547

GCCCATGCTCAGTCTAAACC

GATTGGAGCCCTTGTCTACG

60

5

413, 238

AC025765

Yb8NBC568

AAACCCAACAAATGTGCTTC

GGCAACCTACACAAAGCATGT

60

6

501, 213

AL356137

Yb8NBC576

GGGAACTAACTAGTGGGCAAA

GCATGTACACTAAGGTATGCAAAAG

55

6

475, 149

AL357080

Yb8NBC585

CATTGGGTTTAACATTCGCTCT

CACGTGTGCAGCAATGTATG

60

9

585, 260

AL359077

Yb8NBC589

AGTCTTAATGGGCGCTGAGA

AGTGCCTCACCCAGTAGCAC

60

6

472, 154

AL355499

Yb8NBC596

TCCAGGGCCAAGTAGTGAAT

CTGCCCCAAATGCTTACACT

55

1

543, 203

AC027691

Yb8NBC597

TGAGGTGTTGCAGACGATGT

CGCATGCTTTAGAGAATACCC

60

5

429, 108

AC027304

Yb8NBC598

TGGGTCCTATCATCCCCTATC

CCAGAAGGCATCTCATGGTT

60

19

691, 398

AC011471

Yb8NBC605

GCCTCTAGGTGGAGCCCTTT

GCCCCATTTATGGCTGTTTA

60

1

723, 392

AL357972

Yb8NBC622

TCAAAACTTGCGGATTTTCC

TGCTGAGCTATACTGGTGCAA

60

11

451, 357

AF321237

Yb8NBC636

CCTCTGGCAAGCTGCTTAAT

TCACAGCTAGAGGAGACATGAAA

60

1

498, 169

AL512348

Yb8NBC65

ATCTCATCTCCCTGCCTCTG

GGGAGGTCTGGAGATCTGTG

60

6

517, 186

AL031228

Yb8NBC77

CGGAATGTTCTGAGGATCAAA

GGAAGCTCTGCACAACTCCTA

55

12

547, 218

AC007542

Yb8NBC80

ATTTCACAGTGCCCTGTCCT

TCCAGGCAGATGAATTGACA

60

18

456, 123

AC006249

Yb8NBC93

AAGTGAGTCCCAGGGCCTTCT

CACACAGGCACTTGTTTGGT

60

20

601, 274

AL035461

Yb9NBC10

GTTTTCCTGGTGTGCCCTAAATA

TTTACCTAACTCACAAGACCCAAAG

60

4

524, 197

AC025961

Yb9NBC50

GTTCCACAAGTACAGGAGAAAATGT

GAAGCTCTTTAGGAAACCAAATCTC

55

11

460, 138

AL109865

Yc1NBC2

TCTCTCATGAACATAGATACAAA

CGTGCATTCTTGAGATAAAT

60

7

443, 102

AC006195

Yc1NBC35

CCCATTCTCCATGCCGTGAT

TGCAAGGCATTGGGGATACA

60

16

481, 162

AC004638

Yc1NBC53

AAAGCTATCAACCATGCCAACA

GAAAATGCTATTTTGGGGAATG

62

7

505, 186

AC004848

Yc1NBC63

GGTACTCAGTAACACATCAAGA

AAGCTGGGTGGTGGGTTCAC

60

6

502, 181

AL121964

Yc1RG68

ATGGTGTCCACAAGAAACTGAG

GGAAGGCTCCATTATAGGTCTTG

60

7

480, 166

AC008039