d2_cluster: A Validated Method for Clustering EST and Full-Length cDNA Sequences

0 CGAAAACAAACCAAAAATCTTTATTTATAAAAGTGAGTTTTAACTGACTTTTTATACATC gnl|UG|Rn#S10205(0)

0 CGAAAACAAACCAAAAATCTTTATTTATAAAAGTGAGTTTTAACTGACTTTTTATACATC gnl|UG|Rn#S30114(0)

0 CGAAAACATACCAAAAATCTTTATTTATAAAAGTGAGTTTTAACTGACTTTTTAGACATC gnl|UG|Rn#S10920(0)

0 CGAAAACAAACCAAAAATCTTTATTTATAAAAGTGAGTTTTAACTGACTTTTTATACATC cons for 1

60 ATATGACATATGGACAGCACCAGCGTTATCTGTAATATTTTCAACATGGGTTTTAAACAC gnl|UG|Rn#S10205(0)

60 ATATGACATATGGACAGCACCAGCGTTATCTGTAATATTTTCAACATGGGTTTTAAACAC gnl|UG|Rn#S30114(0)

60 ATATGACATATGGACAGCACCAGCGTTATCTGTAATAGTTTCAACATGGGTTTTAAACAC gnl|UG|Rn#S10920(0)

60 ATATGACATATGGACAGCACCAGCGTTATCTGTAATATTTTCAACATGGGTTTTAAACAC cons for 1

120 AGTGAGGCGTATGCATCTGAGCTCCGTTGGTCACAAAACAGAAATGCTGCCGTAACTTTG gnl|UG|Rn#S10205(0)

120 AGTGAGGCGTATGCATCTGAGCTCCGTTGGTCACAACACAGAAATGCTGCCGTAACTTTG gnl|UG|Rn#S30114(0)

120 AGTGAGGCGTATGCATCTGAGCTCCGTTGGTCAGAACACAGAAATGCTGCCGTAACTTTG gnl|UG|Rn#S10920(0)

120 AGTGAGGCGTATGCATCTGAGCTCCGTTGGTCACAACACAGAAATGCTGCCGTAACTTTG cons for 1

* *

180 CTGCCATCAGGATTCTGCGCCGCAGTGGTTTTTGGGGGTAGGTTTACCGCCGGAGGTGGT gnl|UG|Rn#S10205(0)

180 CTGCCATCAGGATTCTGCGCCGCAATGGTTTTTGGGGGTAGGTTTACCGCCGGAGGTGGT gnl|UG|Rn#S30114(0)

180 CTGCCATCAGGATTCTGCGCCGCAGTGGTTTTTGGGGGTAGGTTTACCGCCGGAAGTGGT gnl|UG|Rn#S10920(0)

180 CTGCCATCAGGATTCTGCGCCGCAGTGGTTTTTGGGGGTAGGTTTACCGCCGGAGGTGGT cons for 1

* *

240 CGGTCACATAACCATCGGCTGTGGATTCCCGAGCAGCACAGGAGCCAGTCTCAGCAAAGC gnl|UG|Rn#S10205(0)

240 CGGTCACATAACCATCGGCTGTGGATTCCCGAGCAGCACAGGAGCCAGTCTCAGCAAAGC gnl|UG|Rn#S30114(0)

240 CGGTCACATAACCATCGGCTGTGGATTCCCGAGCAGCACAGGAGCCAGTCTCAGCAAAGC gnl|UG|Rn#S10920(0)

240 CGGTCACATAACCATCGGCTGTGGATTCCCGAGCAGCACAGGAGCCAGTCTCAGCAAAGC cons for 1

300 GCGGACTGGCATTTTTAGGTGTCTGAACCTGAAGAGGAGTTCAGCAAAGCTTGTGCTCCC gnl|UG|Rn#S10205(0)

300 GCGGACTGGCATTTTTAGGTGTCTGAACCTGAATAGGAGTTCAGCAAAGCTTGTGCTCCC gnl|UG|Rn#S30114(0)

300 CCCGACTGGCATTTTTAGGTGTCTGAACCTGAATAGGAGTTCAGCAAAGCTTGTGCTCCC gnl|UG|Rn#S10920(0)

300 GCGGACTGGCATTTTTAGGTGTCTGAACCTGAATAGGAGTTCAGCAAAGCTTGTGCTCCC cons for 1

* * *

360 TTCCAGTCCCAGGGGTGGCAAGTGTCGCGGTGCTGGCACAGAGTGGTAGACCAGGAAGCA gnl|UG|Rn#S10205(0)

360 TTCCAGTCCCATGGGTGGCAAGTGTCGCGGTGCTGGCACAGAGTGGTAGACCATGAATCA gnl|UG|Rn#S30114(0)

360 TTCCAGTCCC-------------------------------------------------- gnl|UG|Rn#S10920(0)

360 TTCCAGTCCCAGGGGTGGCAAGTGTCGCGGTGCTGGCACAGAGTGGTAGACCAGGAAGCA cons for 1

* *

420 GGCCAGCATGTTTAGCTGAGACTTCTCAAC------------------------------ gnl|UG|Rn#S10205(0)

420 GGCCACCATGTTTAGCTGAGACTTCTCAACAGGCTGCCCACTAAGGTAGGCATGCACACA gnl|UG|Rn#S30114(0)

420 GGCCACCATGTTTAGCTGAGACTTCTCAACAGGCTGCCCACTAAGGTAGGCATGCACACA cons for 1