Skeletal Muscle SAGE Tags Detected 100 or More Times in a Sample of 53,875 Total Tags
| Tag (CATG + . . .) | Gene product | GenBank accession no. | Times detected |
| CCCATCGTCC | cytochrome c oxidase 2 | 7627–40 | 1780 |
| AAGATCAAGA | α actin | J00068 | 1001 |
| ATCCCCGCCC | creatine kinase M | M14780 | 851 |
| TTCATACACC | NADH dehydrogenase 4/4L | 11491-504 | 847 |
| CTGGAGCCTG | type 1 (slow, cardiac β) myosin heavy chain | X05631 | 830 |
| CCCACCACCC | β-tropomyosin | X06825 | 703 |
| AGCCCTACAA | NADH dehydrogenase 3 | 9709–22 | 702 |
| TACCATCAAT | glyceraldehyde-3-phosphate dehydrogenase | M36164 | 593 |
| GCGACCGTCA | fructose 1,6-diphosphate aldolase a | M21190 | 582 |
| GTTTGGATCT | myoglobin | X00373 | 581 |
| ACCCTTGGCC | NADH dehydrogenase 1 | 3263–76 | 565 |
| GAATGACTGA | myosin heavy chain 2a | Z32858 | 563 |
| TCCTCAACCC | slow twitch troponin C | M37984 | 499 |
| TGATTTCACT | cytochrome c oxidase 3 | 8726–39 | 489 |
| ACTAACACCC | NADH dehydrogenase 2 | 4606–19 | 478 |
| CTAAGACTTC | 16 S rRNA | 2276–89 | 442 |
| TGGGCGGCCT | myosin light chain 2 | M21812 | 409 |
| CCCCGGCCAC | desmin | U59167 | 400 |
| GAGGGCCGGA | fast troponin I | L21715 | 400 |
| ATGGTGCGCC | fast skeletal troponin C | X07898 | 397 |
| AGGCACCTGG | EST similar to slow twitch skeletal muscle troponin I | N87243 F17753 | 393 |
| TTCCAATAAA | cardiac myosin light chain 2 | X66141 | 388 |
| GGGGAGGAAC | slow troponin T | M19309 | 364 |
| AAAACATTCT | truncated 16 S rRNA | 1738–51 | 325 |
| AGGATCGAGG | β enolase | X51957 | 324 |
| CACCTAATTG | ATPase 6/8 | 8460–73 | 304 |
| GGAGCCAACT | EST from muscle, similar to troponin T | AA192217 | 287 |
| CAGAGGGTGG | glycogen phosphorylase | X03031 | 285 |
| TAGGTTGTCT | translationally controlled tumor protein | L13806 | 277 |
| AATCAACAAA | myosin light chain 3f | X05451 | 257 |
| CAAGCATCCC | truncated 12 S rRNA | 118–31 | 248 |
| CACTACTCAC | cytochrome b | 14326–39 | 238 |
| CAAGTATAAA | titin | X69490 | 208 |
| CCTCAGGATA | NADH dehydrogenase 5 | 13853–66 | 186 |
| GAGGCTGTGG | phosphoglycerate mutase muscle specific subunit | M18172 | 186 |
| ATTTGAGAAG | cytochrome c oxidase 1 | 6737–50 | 177 |
| GGGCTGGGGT | ribosomal protein L29 | U10248 | 175 |
| GCTTTGCCTC | cytochrome c oxidase 6a | M83308 | 169 |
| TCGAAGCCCC | NADH dehydrogense 4L | 10841–54 | 169 |
| AAGACAGTGG | ribosomal protein L37a | X66699 | 163 |
| TGGGCAAAGC | elongation factor 1γ | Z11531 | 163 |
| AAAGTCATTG | α-tropomyosin | M19713 | 146 |
| TGCCAGAAAA | telethonin | AJ000491 | 142 |
| AGCACCTCCA | elongation factor 2 | Z11692 | 131 |
| TTGGTCCTCT | ribosomal protein L41 | AF026844 | 131 |
| TAATGACAAT | skeletal muscle LIM-protein FHL1 | U60115 | 128 |
| TGAATAAAGT | sarcolipin | U96093 | 124 |
| TTCAATAAAA | acidic ribosomal phosphoprotein P1 | M17886 | 117 |
| TTTACTCAGC | skeletal muscle C-protein (slow myosin binding protein C) | X66276 | 111 |
| X73114 | |||
| CTCATAGCAG | EST similar to translationally controlled tumor protein | AA716547 | 110 |
| TTGGAGATCT | NADH dehydrogenase MLRQ subunit | U94586 | 110 |
| GTTTCAGGTA | Ca2+ ATPase (HK2) | M23115 | 107 |
| AGGGCTTCCA | Wilm’s tumor-related protein QM | M642421 | 103 |
| TCTGCACCTC | S1 (elongation factor-1 α2) | X70940 | 100 |
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Complete lists of all tags, in both alphabetical order and order of abundance, are available via the internet athttp://www.gcrc.rochester.edu/SWindex.html.
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↵Italics denotes tags matching the mitochondrial genome (HSMITG, GenBank accession no. X93334), and values listed under accession number for these tags indicate the locus within the mitochondrial genome.
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↵Also matches other actin isoforms, but α-actin is much more abundant in skeletal muscle.
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↵Results from present study, Lanfranchi et al. (1996), andWade et al. (1989) have A in eighth position; X05451 has G in eighth position.
