Table 1.
Structural Analysis ofFugu Genes
| Fugugenes | Length | Homologs | Amino acid | SwissProt/GenBank accession no. | |||||
| kb | amino acid | ||||||||
| similarity (%) | identity (%) | ||||||||
| SCML2 | 2.0 | 250 | Drosophila SCM | 70 | 63 | Q24191 | |||
| human SCML2 | 74 | 65 | Z93023, AL031007 | ||||||
| STK9 | 12.5 | 1104 | human STK9 | 67 | 62 | Y15057 | |||
| yeast SLT2 | 46 | 34 | Q00772 | ||||||
| Dictyostelium CDK7 | 49 | 38 | P54685 | ||||||
| XLRS1 | 4.1 | 280 | human XLRS1 | 78 | 71 | AF014459 | |||
| mouse XLRS1 | 78 | 71 | AJ011381 | ||||||
| PPEF-1 | 5.5 | 683 | Drosophila rdgC | 54 | 42 | P40421 | |||
| Caenorhabditis PPEF | 56 | 46 | AF023454 | ||||||
| human PPEF-1 | 64 | 54 | AF023455 | ||||||
| human PPEF-2 | 63 | 54 | AF023456 | ||||||
| mouse PPEF-2 | 64 | 55 | AF023458 | ||||||
| KELCH2 | 2.1 | 531 | human putative protein Q14145 | 39 | 31 | AC004021 | |||
| KELCH1 | 2.1 | 518 | human putative protein Q14145 | 45 | 33 | AC004021 | |||
| PHKA2 | 10 | 1229 | human PHKA1 | 74 | 67 | P46020 | |||
| mouse PHKA1 | 73 | 67 | P18826 | ||||||
| rabbit PHKA1 | 73 | 67 | P18688 | ||||||
| human PHKA2 | 77 | 72 | P46019 | ||||||
| rabbit PHKA2 | 78 | 72 | P46018 | ||||||
| AP19 | 1.2 | 157 | human AP19 | 98 | 96 | AC004106 | |||
| mouse AP19 | 91 | 86 | Q00382 | ||||||
| yeast AP19 | 67 | 54 | P35181 | ||||||
| U2AF1–RS2 | 1.8 | 605 | human U2AF1–RS1 | 65 | 54 | D49676 | |||
| mouse U2AF1–RS1 | 69 | 58 | D85430 | ||||||
| human U2AF1–RS2 | 65 | 54 | D49677 | ||||||
| mouse U2AF1–RS2 | 68 | 58 | D45205 | ||||||
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The nine putative Fugu genes are listed together with sets of homologs found by database search. The approximate length of each gene is given in kb. The percent similarity and identity were calculated by the GCG program BESTFIT.
