Interphase FISH Analysis of BAC/PAC Clones from the Mouse and Human WS Regions
| Clone | Size (kb) | Gene within clone | No. of FISH “dots” per chromosome | ||||
| Average | s.d. | ||||||
| Human | |||||||
| RG030E19 | 155 | ELN | 1.21 | 0.43 | |||
| RG350L10 | 180 | p47–phox | 4.85 | 1.23 | |||
| Mouse | |||||||
| 42J20 | 107 | Eln | 1.48 | 0.69 | |||
| 303E12 | 163 | 1.44 | 0.55 | ||||
| P510M19 | 188 | 1.49 | 0.57 | ||||
| 92N10 | 111 | 1.37 | 0.56 | ||||
| 391O16 | 180 | p47–phox | 1.61 | 0.60 | |||
-
BAC/PAC DNA was labeled and hybridized to human G0/G1 interphase fibroblast cells or to mouse interphase cells prepared from spleen. The number of distinct fluorescent dots (i.e., a multilobed signal was scored as one dot) per cluster was scored in 100 interphase chromosomes for each probe. Note that an average of 1 is expected for a small, unreplicated single-copy sequence. Large BACs representing known single-copy loci often produce signals with some substructure, which produces a dot count of >1. The presence of some S and G2 cells in the preparations can also inflate the average dot-count above 1. These factors explain the observation that the average dot-count is 1.2–1.6 for the BACs that we conclude contain single-copy sequences. Of the clones listed, only the human p47–phox-containing BAC (RG350L10) contains sequences that are present in multiple copies. Note that the two human BACs were isolated from the Research Genetics human BAC library (E.D. Green; unpubl.). See Fig. 2 for additional information about the mouse clones.











