The Genexpress IMAGE Knowledge Base of the Human Brain Transcriptome: A Prototype Integrated Resource for Functional and Computational Genomics

Table 1.

Hybridization Signal Intensity of the Seven Gene Transcripts Selected for Detailed Characterization

Genexpress clone (1NIB) name Image clone ID GENX Index1 GENX Index2 Alu Brain1 Brain2 Heart Muscle1 Muscle2
c-0ob03 34591 465 465 −0.19 4.13 5.6 1.51 −1.27 1.39
c-11h05 49279 3960 3960 −0.34 4.06 3.33 0.38 −2.29 1.59
c-0ge07 26501 5201 4044 0.43 4.12 3.56 −0.44 −0.91 0.25
c-03a10 32335 4858 4858 −0.78 2.31 2.03 −0.65 −1.08 −0.18
c-0oa03 34458 3111 200991 1.91 4.35 4.4 1.65 −1.59 −0.02
c-08e08 57147 769 769 1.6 5.81 7.5 −0.09 −1.02 2.44
c-01d10 31734 3809 3809 0.11 4.64 4.54 3.98 −1.7 4.37
Genexpress clone (1NIB) name Image clone ID GENX Index1 GENX Index2 Placenta1 Placenta2 Thymus1 Thymus2 Testis1 Testis2
c-0ob03 34591 465 465 −0.77 0.76 0.12 0.6 −0.22 1.58
c-11h05 49279 3960 3960 0.02 −0.66 −0.04 0.01 0.3 0.31
c-0ge07 26501 5201 4044 −0.57 −0.86 0.06 −0.72 −0.08 −0.77
c-03a10 32335 4858 4858 −1.24 −0.64 −2.3 −0.56 −1.55 −1.3
c-0oa03 34458 3111 200991 −0.08 1.01 0.23 0.99 0.9 1
c-08e08 57147 769 769 −0.52 1.07 0.53 0.54 0.51 1.16
c-01d10 31734 3809 3809 −0.75 0.69 −0.94 −0.74 −0.5 0.03

  • Clones were selected based on hybridization intensity Ri > 1.96 for the brain probe and a maximum of two other probes. Hybridization intensity values used for selection are in dark shade.

This Article

  1. Genome Res. 9: 195-209

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