Optical Mapping of Plasmodium falciparum Chromosome 2

Table 1.

Comparison of NheI Optical Map with Restriction Map Predicted from Sequence

Optical map (kb) Map predicted from sequence (kb) Difference (kb) Relative difference (%) Hybridizing probe
71.8 66.597 5.24
114.5 115.147 0.63 0.6
10.3 10.226 0.02 0.2
3.4 3.359 0.07 2.1
7.9 7.856 0.05 0.6
24.7 23.684 1.03 4.4
6.8 4.933 1.88 38.0
16.5 14.553 1.97 13.6
3.2 2.875 0.30 10.3
0.177
11.5 11.425 0.10 0.9
4.1 3.768 0.30 7.9
63.8 63.252 0.50 0.8
10.0 10.018 0.01 0.1
6.7 6.431 0.27 4.2
8.9 9.248 0.31 3.3
28.7 27.327 1.34 4.9
4.3 4.357 0.07 1.6
7.6 7.581 0.01 0.01 PF2CM93
11.0 10.588 0.44 4.2
60.5 60.324 0.21 0.4
12.3 11.935 0.40 3.3
4.1 3.964 0.12 3.0
58.2 57.925 0.25 0.4
5.5 5.381 0.07 1.3
0.363
1.6 1.546 0.02 1.5
23.4 22.405 0.96 4.3
35.1 34.171 0.91 2.6
18.1 17.156 0.93 5.4
3.1 2.947 0.16 5.4
24.9 25.138 0.28 1.1
40.8 40.107 0.73 1.8
20.8 20.176 0.59 2.9
25.1 24.476 0.62 2.5
77.3 75.172 2.15 2.9 PF2NA66
16.6 16.637 0.07 0.4
48.0 45.683 2.30 5.0
9.4 8.546 0.88 10.3
20.1 18.986 1.15 6.0
23.9 23.192 0.75 3.2
32.1 14.897 5.65
976.5 934.513 0.60 4.3

This Article

  1. Genome Res. 9: 175-181

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