Table 3.
EST–SNPs Confirmed by Fluorescence-Based Sequencing
| Contig | EST–SNP sequence context | Frequency | ||||||||||||||||||||
| 1 | A | A | G | C | T | G | T | G | G | C | (C/T) | A | C | A | C | C | T | T | C | C | C | 4/2 |
| 1 | C | T | T | C | C | C | G | C | T | C | (G/C) | T | C | T | G | C | T | G | C | T | G | 4/2 |
| 2 | C | C | A | T | A | A | A | T | G | C | (G/A) | C | T | A | A | G | A | T | A | A | A | 5/1 |
| 2 | A | A | T | T | A | A | A | G | A | A | (C/T) | A | A | T | A | A | T | G | T | T | C | 5/1 |
| 3 | T | T | T | T | A | A | C | A | A | A | (G/C) | T | A | A | T | C | T | T | C | A | C | 5/1 |
| 4 | A | T | A | A | G | A | T | T | A | T | (T/A) | A | T | A | A | T | A | T | A | T | A | 5/1 |
| 5 | T | T | C | A | G | T | T | T | T | G | (A/T) | G | G | C | T | C | A | T | G | G | G | 5/1 |
| 6 | C | A | G | T | C | T | G | T | A | T | (C/T) | T | T | C | C | A | A | A | A | A | G | 5/1 |
| 7 | G | A | G | T | C | G | A | A | A | T | (G/C) | T | G | A | T | T | C | T | T | C | A | 4/2 |
| 7 | G | A | A | T | G | C | A | G | T | C | (C/T) | G | T | C | A | T | A | T | G | A | C | 4/2 |
| 7 | T | G | A | C | C | A | C | T | A | A | (C/T) | T | T | G | C | A | T | G | T | G | A | 4/2 |
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Summary of SNPs confirmed by fluorescent-based sequencing.
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The contig sequences and their corresponding GenBank accession numbers can be found in the NCBI SNP database under the submitter handle debnick SNPS-981209-A and SNPS-981209-B.
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↵More than one SNP per contig was confirmed in contigs 1, 2, and 7.
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↵Context surrounding the substitution noted between parentheses (major allele/minor allele).
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↵Total of six chromosomes sequenced (three individuals).
