A Comprehensive Approach to Clustering of Expressed Human Gene Sequence: The Sequence Tag Alignment and Consensus Knowledge Base

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Figure 2.
Figure 2.

CRAW analysis of a STACK whole-body index cluster that shows similarity to a genomic clone, AC004106. Sequences are displayed on consecutive lines with one position in the line representing 20 bases. Identical numerical values correspond to regions of sequence identity. Difference in numerical value indicate sequence variarion. Tissue origins are shown in brackets, and tissue libraries are underlined. Subconsensi are highlighted in bold corresponding to the splice variants within fragment AC004106. Primary consensus (11111) shows significant similarity to clathrin coat adaptor complex sigma1B protein (AB015320.1). The secondary consensi (2222, 333333, 666666) show significant similarity to two exons 34000...36000 and 54100...54200 (putative alternate splice regions in genomic clone AC004101).

This Article

  1. Genome Res. 9: 1143-1155

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