A 7.5 Mb Sequence-Ready PAC Contig and Gene Expression Map of Human Chromosome 11p13–p14.1

Table 1.

Listing of Putative 11p13–14.1-Specific Transcripts

GeneMap'98 entries GeneMap'98 intervals Unigene cluster RH-marker Representative cDNA clones Mapped to 11p13 Northern hybridization
WI–9523 D11S929–D11S1324 Hs.91791 279594 n.d.
stSG8940 D11S904–D11S1324 Hs.79793 148452 n.d.
WI–15111 Hs.32478 52631 n.d.
SHGC–15981 Hs.119020 452395 n.d.
A006R28 RH25969 75955 n.d.
stSG12676 RH36159 191848 n.d.
A006U38 Hs.91393 31804 n.d.
stSG4282 Hs.119631 123100 n.d.
stSG35677/A42SGC33830 D11S904–D11S914 RH51732 121149 n.d.
AA251905 D11S1324–D11S914 Hs.48473 360671 n.d.
WI–13781 Hs.23165 380575 + +
WI–16368 Hs.148136 252687 n.d.
WI–13900 Hs.24997 37505 n.d.
WI–17439 Hs.102530 141181 + +
WI–17370 Hs.146441 138104 + +
WI–9460 D11S914–D11S907 Hs.99014 148493 + +
sts–AA017167 Hs.32713 381816 +
H44825 Hs.33130 188394 +
sts–N32907 Hs.44402 259883 n.d.
D11S2259E ( G2 ) Hs.22270 290015 + +
D11S2229E Hs.153900 31A10 + +
R51067 Hs.22383 37385 + +
sts–H37799 D11S907–D11S4102 Hs.32683 244989 n.d.
sts–N37061 Hs.43561 273773 n.d.
A004V27 Hs.99766 44686 + +
sts–R49201 Hs.141002 37144 n.d.
sts–H90759 Hs.128746 240495 + +
SGC44450 Hs.103165 344016 +
WI–11454 Hs.16577 29944 + +
stSG9634 Hs.22666 252955 +
WI–15813 Hs.71472 193700 + +
A003A07 ( PDX1 ) Hs.74642 23576 + +
WI–12839 ( CSTF3 ) Hs.82642 279913 + +
D11S2280E/2323E Hs.4774 26513 + +
WI–20739 Hs.181766 25156 n.d.
WI–12351/D11S981E Hs.14512 136759 + +
SGC32165/stSG25954 Hs.16944 50813 + +
stSG15531 Hs.28723 140811 n.d.
n.a. Hs.8253 60587 * n.d.
SGC34020 Hs.19987 125727 * n.d.
overlapping WI–17696 ( TRAF6 ) Hs.31171 110502 * n.d.
WI–21989 Hs.26172 588550 n.d.
stSG–3901 Hs.26505 41188 * +
A006H38/SHGC–31880 D11S4102–D11S1355 Hs.106863 23368 n.d.
WI–6923 D11S1330–D11S1355 Hs.106826 254585 n.d.
SGC31982/A006G11 D11S1330–D11S1361 Hs.9848 229775 n.d.
stSG31410 D11S1355–D11S1361 Hs.71917 624651 n.d.
stSG3202 Hs.85889 32850 n.d.
n.a. ( GA17 ) DXS983–DXS995 Hs.69469 291847 + +
n.a. ( TR2 ) TR2 + +
n.a. ( FJX1 ) NE3 + +
n.a. NE70/D11S3899 814116 +
  • Human 11p13–14.1 IMAGE cDNA clones. Clones marked by “n.a.” (not annotated) are not derived from the current GeneMap'98 but as described in the text. + and − in the mapping column indicate clones that are or are not mapped to the PAC contig, * marks clones that have been mapped to 11p13 by employing YAC clones from a contig that extends further centromeric. + and − in the Northern analysis column point to the presence or absence of hybridization signals, hybridizations marked by n.d. (not done) have not been performed because the probe did not map to the PAC contig.

This Article

  1. Genome Res. 9: 1074-1086

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