Table 2.
Statistics of EST Clustering and Contiging
| ( a) Preparation of rice EST clusters | |
| ESTs analyzed | 27877 |
| ESTs remaining after quality control | 27710 |
| Clusters | 3400 |
| Singletons | 11233 |
| (b) Breakdown of clusters with 5 or more ESTs | |
| With 5 or more ESTs | 707 |
| With 100 or more ESTs | 9 |
| With between 10 and 99 ESTs | 220 |
| With between 5 and 9 ESTs | 478 |
| (c) Contig sequence matches | |
| Contig sequences finding homolog | 602 |
| Contig sequences with no homolog | 105 |
-
Using all available ESTs as of October 1998.
-
ESTs from smaller cDNA libraries excluded; see Table 1.
-
Matches to SWISS-PROT/TrEMBL, at scores >100 (default scoring matrix).
