Extreme Reduction of Chromosome-Specific α-Satellite Array Is Unusually Common in Human Chromosome 21

Table 1.

Interphase FISH Screening for Low-Alphoid Cell Lines

Chromosome Chromosome-specific α-satellite probes No. of cell lines No. of low-alphoid centromeres
phase I phase II total phase I phase II total prevalence (%)
 1 pZ5.1 328 328
 2 pX2 78 290 368
 3 pAE0.68 62 301 363
 4 p4n1/4 74 243 317
 5 pZ5.1 328 328
 6 pEDZ6 76 245 321
 7 pZ7.5 77 319 396
 8 pZ8.4 76 227 303
 9 pMR9A 65 320 385
10 pZ10-2.3 70 266 336
11 Oncor D11Z1 76 312 388
12 pB12 78 306 384
13 αRI 53 366 419 1 1 0.12
14 αXT 73 321 394
15 pTRA20 58 328 386
16 pZ16A-2 67 241 308
17 TR17 78 357 435 1 1 0.11
18 L1.84 69 239 308
19 pZ5.1 328 328
20 pZ20 77 268 345
21 αRI 53 366 419 6 25 31 3.70
22 αXT 73 321 394
XY XY α-mix 67 294 361
  • Prevalence is expressed in terms of the total number of chromosomes.

  • For chromosomes 1, 5 and 19, screening for low-alphoid centromeres was done on metaphase chromosomes.

  • This mix contains the X- and Y-specific probes, pLAX and pLAY5.5, respectively.

This Article

  1. Genome Res. 9: 895-908

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