Mapping ESTs by Fiber–FISH

Table 2.

The Accuracy of the Visual Assignment of ESTs and cDNAs on Top of a Long-Range Clone

Gene EST or cDNA Size (bp) Long-range clone (kb) (cen → tel) (mean, kb) s.d. No.
PWP2 EST 1 407 175D10 (120) 11 5 12
KNP1 EST 2 385 175D10 66 11 18
282P21 (120) 61 12 18
EST 3 363 282P11 63 7 10
AIRE EST 4 549 22G11 (38) 28 6 15
127P21 (110) 25 11 13
EST 5 431 22G11 26 7 15
cDNA(B1-1) 1800 22G11 21 6 15
92C23 (120) 8 6 13
C21orf3 EST 6 376 579E2 (70) 21 8 12
EST 7 956 579E2 22 8 12
cDNA(21919) 2700 579E2 25 12 15
92C23 52 8 10
SMT3A EST 8 541 83H6 (40) 4 5 26
cDNA(L2328) 1800 83H6 2 6 36
C21orf1 EST 9 461 83H6 20 7 13
Est 10 315 83H6 18 6 11
  • Position determined as distance in kb from centromeric edge to telomeric direction (similar to a Flpter value) of the long-range clone.

  • (s.d.) Standard deviation.

  • Number of measured clones containing an EST or cDNA signal.

This Article

  1. Genome Res. 9: 62-71

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